Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 AC069304.1-201ENST00000491593 704 ntBASIC5.09□□□□□ -1.59
TCRBV7S3A2A0A539 AC134050.1-201ENST00000495088 933 ntBASIC5.09□□□□□ -1.59
TCRBV7S3A2A0A539 AC105233.1-201ENST00000498840 781 ntBASIC5.09□□□□□ -1.59
TCRBV7S3A2A0A539 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC5.09□□□□□ -1.59
TCRBV7S3A2A0A539 SSX6-203ENST00000509958 336 ntTSL 3 BASIC5.09□□□□□ -1.59
TCRBV7S3A2A0A539 AC087897.1-201ENST00000550134 156 ntBASIC5.09□□□□□ -1.59
TCRBV7S3A2A0A539 AC009712.1-201ENST00000564938 316 ntBASIC5.09□□□□□ -1.59
TCRBV7S3A2A0A539 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
TCRBV7S3A2A0A539 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC5.09□□□□□ -1.59
TCRBV7S3A2A0A539 AC009464.1-201ENST00000615731 469 ntBASIC5.09□□□□□ -1.59
TCRBV7S3A2A0A539 AC009159.2-201ENST00000617603 606 ntBASIC5.09□□□□□ -1.59
TCRBV7S3A2A0A539 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC5.09□□□□□ -1.59
TCRBV7S3A2A0A539 AP000484.1-201ENST00000620067 1252 ntBASIC5.09□□□□□ -1.59
TCRBV7S3A2A0A539 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
TCRBV7S3A2A0A539 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.09□□□□□ -1.59
TCRBV7S3A2A0A539 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
TCRBV7S3A2A0A539 AC133552.1-201ENST00000569988 4007 ntBASIC5.09□□□□□ -1.6
TCRBV7S3A2A0A539 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
TCRBV7S3A2A0A539 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC5.09□□□□□ -1.6
TCRBV7S3A2A0A539 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.6
TCRBV7S3A2A0A539 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC5.09□□□□□ -1.6
TCRBV7S3A2A0A539 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.08□□□□□ -1.6
TCRBV7S3A2A0A539 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
TCRBV7S3A2A0A539 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
TCRBV7S3A2A0A539 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
TCRBV7S3A2A0A539 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC5.08□□□□□ -1.6
TCRBV7S3A2A0A539 VN2R3P-201ENST00000422626 1412 ntBASIC5.08□□□□□ -1.6
TCRBV7S3A2A0A539 AC009643.2-201ENST00000603543 1448 ntBASIC5.08□□□□□ -1.6
TCRBV7S3A2A0A539 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.08□□□□□ -1.6
TCRBV7S3A2A0A539 RNU6-666P-201ENST00000363499 107 ntBASIC5.08□□□□□ -1.6
TCRBV7S3A2A0A539 RN7SKP160-201ENST00000363804 340 ntBASIC5.08□□□□□ -1.6
TCRBV7S3A2A0A539 RNA5SP27-201ENST00000363839 119 ntBASIC5.08□□□□□ -1.6
TCRBV7S3A2A0A539 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
TCRBV7S3A2A0A539 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
TCRBV7S3A2A0A539 RNU6-185P-201ENST00000384421 107 ntBASIC5.08□□□□□ -1.6
TCRBV7S3A2A0A539 U3.25-201ENST00000391209 220 ntBASIC5.08□□□□□ -1.6
TCRBV7S3A2A0A539 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
TCRBV7S3A2A0A539 RN7SKP126-201ENST00000411143 300 ntBASIC5.08□□□□□ -1.6
TCRBV7S3A2A0A539 NPM1P40-201ENST00000412758 733 ntBASIC5.08□□□□□ -1.6
TCRBV7S3A2A0A539 GTF2IP5-201ENST00000414608 731 ntBASIC5.08□□□□□ -1.6
TCRBV7S3A2A0A539 HIGD1AP15-201ENST00000416198 280 ntBASIC5.08□□□□□ -1.6
TCRBV7S3A2A0A539 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC5.08□□□□□ -1.6
TCRBV7S3A2A0A539 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC5.08□□□□□ -1.6
TCRBV7S3A2A0A539 IGKV1OR9-1-201ENST00000424370 284 ntBASIC5.08□□□□□ -1.6
TCRBV7S3A2A0A539 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC5.08□□□□□ -1.6
TCRBV7S3A2A0A539 DPY19L1P2-201ENST00000426647 915 ntBASIC5.08□□□□□ -1.6
TCRBV7S3A2A0A539 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
TCRBV7S3A2A0A539 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC5.08□□□□□ -1.6
TCRBV7S3A2A0A539 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC5.08□□□□□ -1.6
TCRBV7S3A2A0A539 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC5.08□□□□□ -1.6
TCRBV7S3A2A0A539 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC5.08□□□□□ -1.6
TCRBV7S3A2A0A539 VN1R25P-201ENST00000443385 738 ntBASIC5.08□□□□□ -1.6
TCRBV7S3A2A0A539 OR51B8P-201ENST00000449892 769 ntBASIC5.08□□□□□ -1.6
TCRBV7S3A2A0A539 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC5.08□□□□□ -1.6
TCRBV7S3A2A0A539 EIF4A2P4-201ENST00000458691 1196 ntBASIC5.08□□□□□ -1.6
TCRBV7S3A2A0A539 AC021205.1-201ENST00000468797 348 ntBASIC5.08□□□□□ -1.6
TCRBV7S3A2A0A539 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
TCRBV7S3A2A0A539 AL136038.1-201ENST00000497246 351 ntBASIC5.08□□□□□ -1.6
TCRBV7S3A2A0A539 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC5.08□□□□□ -1.6
TCRBV7S3A2A0A539 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC5.08□□□□□ -1.6
TCRBV7S3A2A0A539 AP002373.2-201ENST00000541631 1060 ntBASIC5.08□□□□□ -1.6
TCRBV7S3A2A0A539 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC5.08□□□□□ -1.6
TCRBV7S3A2A0A539 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
TCRBV7S3A2A0A539 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC5.08□□□□□ -1.6
TCRBV7S3A2A0A539 AL049779.2-201ENST00000553847 315 ntBASIC5.08□□□□□ -1.6
TCRBV7S3A2A0A539 MIR4472-2-201ENST00000582069 67 ntBASIC5.08□□□□□ -1.6
TCRBV7S3A2A0A539 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC5.08□□□□□ -1.6
TCRBV7S3A2A0A539 SS18L2P2-201ENST00000583960 235 ntBASIC5.08□□□□□ -1.6
TCRBV7S3A2A0A539 AC105254.2-201ENST00000603636 436 ntBASIC5.08□□□□□ -1.6
TCRBV7S3A2A0A539 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC5.08□□□□□ -1.6
TCRBV7S3A2A0A539 IMMP1LP3-201ENST00000604197 224 ntBASIC5.08□□□□□ -1.6
TCRBV7S3A2A0A539 AC096586.1-201ENST00000610267 561 ntBASIC5.08□□□□□ -1.6
TCRBV7S3A2A0A539 MIR6837-201ENST00000620884 64 ntBASIC5.08□□□□□ -1.6
TCRBV7S3A2A0A539 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC5.08□□□□□ -1.6
TCRBV7S3A2A0A539 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC5.08□□□□□ -1.6
TCRBV7S3A2A0A539 AC139713.2-210ENST00000641741 992 ntBASIC5.08□□□□□ -1.6
TCRBV7S3A2A0A539 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
TCRBV7S3A2A0A539 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC5.08□□□□□ -1.6
TCRBV7S3A2A0A539 SALL4P2-201ENST00000423288 2910 ntBASIC5.08□□□□□ -1.6
TCRBV7S3A2A0A539 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.08□□□□□ -1.6
TCRBV7S3A2A0A539 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
TCRBV7S3A2A0A539 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
TCRBV7S3A2A0A539 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC5.08□□□□□ -1.6
TCRBV7S3A2A0A539 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC5.07□□□□□ -1.6
TCRBV7S3A2A0A539 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
TCRBV7S3A2A0A539 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
TCRBV7S3A2A0A539 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
TCRBV7S3A2A0A539 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
TCRBV7S3A2A0A539 MFSD8-220ENST00000641243 1422 ntBASIC5.07□□□□□ -1.6
TCRBV7S3A2A0A539 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
TCRBV7S3A2A0A539 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC5.07□□□□□ -1.6
TCRBV7S3A2A0A539 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
TCRBV7S3A2A0A539 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.07□□□□□ -1.6
TCRBV7S3A2A0A539 AC010266.2-201ENST00000564741 3255 ntBASIC5.07□□□□□ -1.6
TCRBV7S3A2A0A539 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
TCRBV7S3A2A0A539 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.07□□□□□ -1.6
TCRBV7S3A2A0A539 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
TCRBV7S3A2A0A539 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC5.07□□□□□ -1.6
TCRBV7S3A2A0A539 CIR1P2-201ENST00000514821 1342 ntBASIC5.07□□□□□ -1.6
TCRBV7S3A2A0A539 AL355578.1-201ENST00000607405 1328 ntBASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 139.4 ms