Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 MIR3653-201ENST00000625572 110 ntBASIC5.62□□□□□ -1.51
SCN11AQ9UI33 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SCN11AQ9UI33 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SCN11AQ9UI33 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC5.62□□□□□ -1.51
SCN11AQ9UI33 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
SCN11AQ9UI33 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.62□□□□□ -1.51
SCN11AQ9UI33 AL607077.1-201ENST00000401718 499 ntBASIC5.62□□□□□ -1.51
SCN11AQ9UI33 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC5.62□□□□□ -1.51
SCN11AQ9UI33 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC5.62□□□□□ -1.51
SCN11AQ9UI33 RRM2P4-201ENST00000441721 562 ntBASIC5.62□□□□□ -1.51
SCN11AQ9UI33 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC5.62□□□□□ -1.51
SCN11AQ9UI33 AC006326.1-201ENST00000445465 787 ntBASIC5.62□□□□□ -1.51
SCN11AQ9UI33 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC5.62□□□□□ -1.51
SCN11AQ9UI33 AC099522.1-202ENST00000514718 367 ntBASIC5.62□□□□□ -1.51
SCN11AQ9UI33 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC5.62□□□□□ -1.51
SCN11AQ9UI33 AL161756.2-201ENST00000604597 246 ntBASIC5.62□□□□□ -1.51
SCN11AQ9UI33 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC5.62□□□□□ -1.51
SCN11AQ9UI33 MIR8059-201ENST00000620427 81 ntBASIC5.62□□□□□ -1.51
SCN11AQ9UI33 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SCN11AQ9UI33 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SCN11AQ9UI33 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SCN11AQ9UI33 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.62□□□□□ -1.51
SCN11AQ9UI33 MAPK10-372ENST00000641954 3413 ntBASIC5.62□□□□□ -1.51
SCN11AQ9UI33 AL022393.1-201ENST00000625142 1677 ntBASIC5.62□□□□□ -1.51
SCN11AQ9UI33 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
SCN11AQ9UI33 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SCN11AQ9UI33 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
SCN11AQ9UI33 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
SCN11AQ9UI33 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
SCN11AQ9UI33 OR56B2P-201ENST00000317102 954 ntBASIC5.61□□□□□ -1.51
SCN11AQ9UI33 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC5.61□□□□□ -1.51
SCN11AQ9UI33 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC5.61□□□□□ -1.51
SCN11AQ9UI33 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC5.61□□□□□ -1.51
SCN11AQ9UI33 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC5.61□□□□□ -1.51
SCN11AQ9UI33 RPS20P4-201ENST00000461659 355 ntBASIC5.61□□□□□ -1.51
SCN11AQ9UI33 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC5.61□□□□□ -1.51
SCN11AQ9UI33 ATP6V1G1P6-201ENST00000504007 334 ntBASIC5.61□□□□□ -1.51
SCN11AQ9UI33 IGLVVI-25-1-201ENST00000521893 249 ntBASIC5.61□□□□□ -1.51
SCN11AQ9UI33 MTCO1P49-201ENST00000523429 802 ntBASIC5.61□□□□□ -1.51
SCN11AQ9UI33 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC5.61□□□□□ -1.51
SCN11AQ9UI33 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
SCN11AQ9UI33 IPO5P1-202ENST00000600039 287 ntBASIC5.61□□□□□ -1.51
SCN11AQ9UI33 COX6CP4-201ENST00000605798 228 ntBASIC5.61□□□□□ -1.51
SCN11AQ9UI33 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
SCN11AQ9UI33 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SCN11AQ9UI33 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
SCN11AQ9UI33 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SCN11AQ9UI33 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.61□□□□□ -1.51
SCN11AQ9UI33 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SCN11AQ9UI33 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
SCN11AQ9UI33 GPATCH2-202ENST00000366935 5851 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
SCN11AQ9UI33 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
SCN11AQ9UI33 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
SCN11AQ9UI33 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SCN11AQ9UI33 RN7SKP280-201ENST00000364196 304 ntBASIC5.6□□□□□ -1.51
SCN11AQ9UI33 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
SCN11AQ9UI33 RCC2P2-201ENST00000422174 918 ntBASIC5.6□□□□□ -1.51
SCN11AQ9UI33 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC5.6□□□□□ -1.51
SCN11AQ9UI33 AL512326.1-201ENST00000443050 721 ntBASIC5.6□□□□□ -1.51
SCN11AQ9UI33 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC5.6□□□□□ -1.51
SCN11AQ9UI33 AL592156.1-201ENST00000508758 304 ntBASIC5.6□□□□□ -1.51
SCN11AQ9UI33 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC5.6□□□□□ -1.51
SCN11AQ9UI33 OR5BC1P-201ENST00000529327 739 ntBASIC5.6□□□□□ -1.51
SCN11AQ9UI33 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC5.6□□□□□ -1.51
SCN11AQ9UI33 MIR4444-1-201ENST00000581696 74 ntBASIC5.6□□□□□ -1.51
SCN11AQ9UI33 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC5.6□□□□□ -1.51
SCN11AQ9UI33 MIR4444-2-201ENST00000584390 74 ntBASIC5.6□□□□□ -1.51
SCN11AQ9UI33 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.6□□□□□ -1.51
SCN11AQ9UI33 AC097461.1-201ENST00000568928 2821 ntBASIC5.6□□□□□ -1.51
SCN11AQ9UI33 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC5.6□□□□□ -1.51
SCN11AQ9UI33 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
SCN11AQ9UI33 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
SCN11AQ9UI33 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
SCN11AQ9UI33 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC5.6□□□□□ -1.51
SCN11AQ9UI33 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.6□□□□□ -1.51
SCN11AQ9UI33 AC017104.4-201ENST00000636283 1592 ntBASIC5.6□□□□□ -1.51
SCN11AQ9UI33 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SCN11AQ9UI33 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC5.6□□□□□ -1.51
SCN11AQ9UI33 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC5.6□□□□□ -1.51
SCN11AQ9UI33 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC5.6□□□□□ -1.51
SCN11AQ9UI33 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SCN11AQ9UI33 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
SCN11AQ9UI33 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SCN11AQ9UI33 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
SCN11AQ9UI33 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
SCN11AQ9UI33 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC5.6□□□□□ -1.51
SCN11AQ9UI33 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC5.6□□□□□ -1.51
SCN11AQ9UI33 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC5.6□□□□□ -1.51
SCN11AQ9UI33 RNU4-89P-201ENST00000607443 133 ntBASIC5.6□□□□□ -1.51
SCN11AQ9UI33 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC5.6□□□□□ -1.51
SCN11AQ9UI33 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
SCN11AQ9UI33 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC5.6□□□□□ -1.51
SCN11AQ9UI33 FAP-203ENST00000443424 2598 ntTSL 2 BASIC5.59□□□□□ -1.51
SCN11AQ9UI33 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC5.59□□□□□ -1.51
SCN11AQ9UI33 TINAG-201ENST00000259782 1754 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
SCN11AQ9UI33 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.59□□□□□ -1.51
SCN11AQ9UI33 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
SCN11AQ9UI33 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC5.59□□□□□ -1.51
SCN11AQ9UI33 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
SCN11AQ9UI33 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC5.59□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 97.1 ms