Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
CHD7Q9P2D1 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
CHD7Q9P2D1 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CHD7Q9P2D1 MIR200C-201ENST00000384980 68 ntBASIC4.46□□□□□ -1.7
CHD7Q9P2D1 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CHD7Q9P2D1 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CHD7Q9P2D1 CAB39P1-201ENST00000502277 460 ntBASIC4.46□□□□□ -1.7
CHD7Q9P2D1 AC074250.1-201ENST00000511117 192 ntBASIC4.46□□□□□ -1.7
CHD7Q9P2D1 HMGN1P15-201ENST00000513870 295 ntBASIC4.46□□□□□ -1.7
CHD7Q9P2D1 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC4.46□□□□□ -1.7
CHD7Q9P2D1 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC4.46□□□□□ -1.7
CHD7Q9P2D1 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC4.46□□□□□ -1.7
CHD7Q9P2D1 AC009063.2-203ENST00000567860 745 ntTSL 2 BASIC4.46□□□□□ -1.7
CHD7Q9P2D1 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
CHD7Q9P2D1 DCAF10-201ENST00000242323 7393 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CHD7Q9P2D1 ZEB2-227ENST00000627532 9541 ntAPPRIS P2 TSL 1 (best) BASIC4.46□□□□□ -1.7
CHD7Q9P2D1 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CHD7Q9P2D1 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CHD7Q9P2D1 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
CHD7Q9P2D1 SLC15A2-205ENST00000489711 5673 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CHD7Q9P2D1 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC4.45□□□□□ -1.7
CHD7Q9P2D1 OR51B4-201ENST00000380224 933 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
CHD7Q9P2D1 MIR490-201ENST00000384865 128 ntBASIC4.45□□□□□ -1.7
CHD7Q9P2D1 RNU4-6P-201ENST00000410804 122 ntBASIC4.45□□□□□ -1.7
CHD7Q9P2D1 RN7SKP167-201ENST00000411047 285 ntBASIC4.45□□□□□ -1.7
CHD7Q9P2D1 OR4F13P-201ENST00000428478 931 ntBASIC4.45□□□□□ -1.7
CHD7Q9P2D1 NPM1P18-201ENST00000434232 732 ntBASIC4.45□□□□□ -1.7
CHD7Q9P2D1 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC4.45□□□□□ -1.7
CHD7Q9P2D1 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.45□□□□□ -1.7
CHD7Q9P2D1 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC4.45□□□□□ -1.7
CHD7Q9P2D1 AC022417.1-201ENST00000624768 1303 ntBASIC4.45□□□□□ -1.7
CHD7Q9P2D1 AC107398.3-201ENST00000562284 7000 ntBASIC4.45□□□□□ -1.7
CHD7Q9P2D1 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
CHD7Q9P2D1 AL590806.1-201ENST00000415818 853 ntBASIC4.45□□□□□ -1.7
CHD7Q9P2D1 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CHD7Q9P2D1 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC4.45□□□□□ -1.7
CHD7Q9P2D1 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC4.45□□□□□ -1.7
CHD7Q9P2D1 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC4.45□□□□□ -1.7
CHD7Q9P2D1 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC4.45□□□□□ -1.7
CHD7Q9P2D1 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC4.45□□□□□ -1.7
CHD7Q9P2D1 PACRG-211ENST00000621363 360 ntTSL 5 BASIC4.45□□□□□ -1.7
CHD7Q9P2D1 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.45□□□□□ -1.7
CHD7Q9P2D1 USP9YP4-201ENST00000424401 1745 ntBASIC4.45□□□□□ -1.7
CHD7Q9P2D1 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC4.45□□□□□ -1.7
CHD7Q9P2D1 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC4.45□□□□□ -1.7
CHD7Q9P2D1 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CHD7Q9P2D1 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CHD7Q9P2D1 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.44□□□□□ -1.7
CHD7Q9P2D1 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
CHD7Q9P2D1 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CHD7Q9P2D1 SNORA74C-2-201ENST00000411179 201 ntBASIC4.44□□□□□ -1.7
CHD7Q9P2D1 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
CHD7Q9P2D1 AC104978.1-201ENST00000449387 391 ntBASIC4.44□□□□□ -1.7
CHD7Q9P2D1 MIR5684-201ENST00000585074 65 ntBASIC4.44□□□□□ -1.7
CHD7Q9P2D1 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC4.44□□□□□ -1.7
CHD7Q9P2D1 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CHD7Q9P2D1 USP47-203ENST00000399455 7396 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
CHD7Q9P2D1 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CHD7Q9P2D1 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CHD7Q9P2D1 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC4.44□□□□□ -1.7
CHD7Q9P2D1 SF3B3-201ENST00000302516 9720 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CHD7Q9P2D1 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CHD7Q9P2D1 MGAM-208ENST00000549489 6525 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CHD7Q9P2D1 PDE4DIP-206ENST00000369356 8307 ntAPPRIS P4 TSL 1 (best) BASIC4.44□□□□□ -1.7
CHD7Q9P2D1 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
CHD7Q9P2D1 GLS-204ENST00000409428 816 ntTSL 2 BASIC4.44□□□□□ -1.7
CHD7Q9P2D1 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC4.44□□□□□ -1.7
CHD7Q9P2D1 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CHD7Q9P2D1 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CHD7Q9P2D1 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC4.44□□□□□ -1.7
CHD7Q9P2D1 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC4.44□□□□□ -1.7
CHD7Q9P2D1 Z98200.1-201ENST00000607298 470 ntBASIC4.44□□□□□ -1.7
CHD7Q9P2D1 AL159169.3-201ENST00000608871 561 ntBASIC4.44□□□□□ -1.7
CHD7Q9P2D1 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
CHD7Q9P2D1 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CHD7Q9P2D1 MAPK10-349ENST00000641767 3661 ntBASIC4.44□□□□□ -1.7
CHD7Q9P2D1 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CHD7Q9P2D1 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CHD7Q9P2D1 RUNX1T1-205ENST00000436581 7454 ntTSL 5 BASIC4.44□□□□□ -1.7
CHD7Q9P2D1 NXPH1-205ENST00000602349 1953 ntBASIC4.44□□□□□ -1.7
CHD7Q9P2D1 STS-201ENST00000217961 6521 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CHD7Q9P2D1 AC073346.2-201ENST00000624724 2058 ntBASIC4.44□□□□□ -1.7
CHD7Q9P2D1 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
CHD7Q9P2D1 KCNMA1-203ENST00000354353 5732 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
CHD7Q9P2D1 EYA3-204ENST00000436342 5943 ntTSL 2 BASIC4.44□□□□□ -1.7
CHD7Q9P2D1 SERPINA7P1-201ENST00000443077 631 ntBASIC4.44□□□□□ -1.7
CHD7Q9P2D1 OR9M1P-201ENST00000459641 921 ntBASIC4.44□□□□□ -1.7
CHD7Q9P2D1 ATP1B1P1-201ENST00000509767 915 ntBASIC4.44□□□□□ -1.7
CHD7Q9P2D1 AC093853.1-201ENST00000515689 483 ntBASIC4.44□□□□□ -1.7
CHD7Q9P2D1 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC4.44□□□□□ -1.7
CHD7Q9P2D1 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC4.44□□□□□ -1.7
CHD7Q9P2D1 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.44□□□□□ -1.7
CHD7Q9P2D1 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC4.44□□□□□ -1.7
CHD7Q9P2D1 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CHD7Q9P2D1 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.43□□□□□ -1.7
CHD7Q9P2D1 ZNF81-204ENST00000376954 7933 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
CHD7Q9P2D1 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CHD7Q9P2D1 AC239868.2-201ENST00000564237 4527 ntBASIC4.43□□□□□ -1.7
CHD7Q9P2D1 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
CHD7Q9P2D1 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms