Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 Y_RNA.402-201ENST00000383972 102 ntBASIC6.84□□□□□ -1.31
CNTN3Q9P232 MT-TD-201ENST00000387419 68 ntBASIC6.84□□□□□ -1.31
CNTN3Q9P232 METTL5-204ENST00000409340 472 ntTSL 5 BASIC6.84□□□□□ -1.31
CNTN3Q9P232 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC6.84□□□□□ -1.31
CNTN3Q9P232 AC114814.2-201ENST00000419195 485 ntBASIC6.84□□□□□ -1.31
CNTN3Q9P232 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC6.84□□□□□ -1.31
CNTN3Q9P232 RPS7P14-201ENST00000426405 583 ntBASIC6.84□□□□□ -1.31
CNTN3Q9P232 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC6.84□□□□□ -1.31
CNTN3Q9P232 DPPA3P1-201ENST00000448050 469 ntBASIC6.84□□□□□ -1.31
CNTN3Q9P232 FDX1P2-201ENST00000450769 375 ntBASIC6.84□□□□□ -1.31
CNTN3Q9P232 HMGB1P7-201ENST00000450921 612 ntBASIC6.84□□□□□ -1.31
CNTN3Q9P232 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC6.84□□□□□ -1.31
CNTN3Q9P232 AL133351.3-201ENST00000454998 193 ntBASIC6.84□□□□□ -1.31
CNTN3Q9P232 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC6.84□□□□□ -1.31
CNTN3Q9P232 UCK2-205ENST00000469256 753 ntTSL 3 BASIC6.84□□□□□ -1.31
CNTN3Q9P232 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC6.84□□□□□ -1.31
CNTN3Q9P232 FTH1P8-201ENST00000498161 514 ntBASIC6.84□□□□□ -1.31
CNTN3Q9P232 AC091951.2-201ENST00000500762 203 ntBASIC6.84□□□□□ -1.31
CNTN3Q9P232 MTCO2P30-201ENST00000503662 364 ntBASIC6.84□□□□□ -1.31
CNTN3Q9P232 MTND3P22-201ENST00000510932 243 ntBASIC6.84□□□□□ -1.31
CNTN3Q9P232 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC6.84□□□□□ -1.31
CNTN3Q9P232 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC6.84□□□□□ -1.31
CNTN3Q9P232 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC6.84□□□□□ -1.31
CNTN3Q9P232 OR5AQ1P-201ENST00000527596 927 ntBASIC6.84□□□□□ -1.31
CNTN3Q9P232 OR5AL2P-201ENST00000532185 920 ntBASIC6.84□□□□□ -1.31
CNTN3Q9P232 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC6.84□□□□□ -1.31
CNTN3Q9P232 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC6.84□□□□□ -1.31
CNTN3Q9P232 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
CNTN3Q9P232 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC6.84□□□□□ -1.31
CNTN3Q9P232 KPNA2P3-201ENST00000584190 848 ntBASIC6.84□□□□□ -1.31
CNTN3Q9P232 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC6.84□□□□□ -1.31
CNTN3Q9P232 UBE2V2P2-201ENST00000587677 504 ntBASIC6.84□□□□□ -1.31
CNTN3Q9P232 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
CNTN3Q9P232 AL499605.1-201ENST00000604628 403 ntBASIC6.84□□□□□ -1.31
CNTN3Q9P232 AL049634.3-201ENST00000604968 457 ntBASIC6.84□□□□□ -1.31
CNTN3Q9P232 UBE2Q2P2-203ENST00000613592 761 ntBASIC6.84□□□□□ -1.31
CNTN3Q9P232 AC234782.5-201ENST00000617723 324 ntBASIC6.84□□□□□ -1.31
CNTN3Q9P232 AC073488.6-201ENST00000632293 754 ntBASIC6.84□□□□□ -1.31
CNTN3Q9P232 MIPOL1-201ENST00000327441 7185 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
CNTN3Q9P232 AC105235.1-201ENST00000623208 1816 ntBASIC6.84□□□□□ -1.31
CNTN3Q9P232 GAPVD1-202ENST00000297933 6003 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
CNTN3Q9P232 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC6.84□□□□□ -1.31
CNTN3Q9P232 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC6.84□□□□□ -1.31
CNTN3Q9P232 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.31
CNTN3Q9P232 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
CNTN3Q9P232 ACPP-202ENST00000351273 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
CNTN3Q9P232 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
CNTN3Q9P232 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
CNTN3Q9P232 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC6.84□□□□□ -1.31
CNTN3Q9P232 ZNF680P1-201ENST00000436625 1469 ntBASIC6.84□□□□□ -1.31
CNTN3Q9P232 AC015689.2-201ENST00000528172 1738 ntBASIC6.84□□□□□ -1.31
CNTN3Q9P232 MAP4K4-221ENST00000634702 3800 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
CNTN3Q9P232 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC6.84□□□□□ -1.32
CNTN3Q9P232 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.32
CNTN3Q9P232 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC6.84□□□□□ -1.32
CNTN3Q9P232 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC6.83□□□□□ -1.32
CNTN3Q9P232 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
CNTN3Q9P232 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
CNTN3Q9P232 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC6.83□□□□□ -1.32
CNTN3Q9P232 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
CNTN3Q9P232 CASC19-280ENST00000642102 1351 ntBASIC6.83□□□□□ -1.32
CNTN3Q9P232 DCLK1-208ENST00000615680 7592 ntTSL 2 BASIC6.83□□□□□ -1.32
CNTN3Q9P232 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
CNTN3Q9P232 RLIMP2-201ENST00000427891 1563 ntBASIC6.83□□□□□ -1.32
CNTN3Q9P232 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
CNTN3Q9P232 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
CNTN3Q9P232 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC6.83□□□□□ -1.32
CNTN3Q9P232 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC6.83□□□□□ -1.32
CNTN3Q9P232 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
CNTN3Q9P232 CLSTN2-201ENST00000458420 14202 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
CNTN3Q9P232 B3GALT5-203ENST00000380620 13170 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
CNTN3Q9P232 ADAMTS9-AS2-203ENST00000481312 1970 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
CNTN3Q9P232 RNU6-433P-201ENST00000363216 104 ntBASIC6.83□□□□□ -1.32
CNTN3Q9P232 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC6.83□□□□□ -1.32
CNTN3Q9P232 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC6.83□□□□□ -1.32
CNTN3Q9P232 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
CNTN3Q9P232 GCNT1P4-201ENST00000404096 329 ntBASIC6.83□□□□□ -1.32
CNTN3Q9P232 RN7SKP121-201ENST00000410842 305 ntBASIC6.83□□□□□ -1.32
CNTN3Q9P232 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC6.83□□□□□ -1.32
CNTN3Q9P232 AL121878.1-201ENST00000418638 859 ntBASIC6.83□□□□□ -1.32
CNTN3Q9P232 B3GALNT1P1-201ENST00000420569 975 ntBASIC6.83□□□□□ -1.32
CNTN3Q9P232 RPS27AP14-201ENST00000422868 454 ntBASIC6.83□□□□□ -1.32
CNTN3Q9P232 AL354707.3-201ENST00000427308 331 ntBASIC6.83□□□□□ -1.32
CNTN3Q9P232 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
CNTN3Q9P232 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC6.83□□□□□ -1.32
CNTN3Q9P232 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC6.83□□□□□ -1.32
CNTN3Q9P232 AL513175.1-201ENST00000431492 780 ntBASIC6.83□□□□□ -1.32
CNTN3Q9P232 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
CNTN3Q9P232 AC007679.3-201ENST00000434035 414 ntBASIC6.83□□□□□ -1.32
CNTN3Q9P232 OR7E125P-201ENST00000443450 846 ntBASIC6.83□□□□□ -1.32
CNTN3Q9P232 ANKRD30BP3-201ENST00000444850 1070 ntBASIC6.83□□□□□ -1.32
CNTN3Q9P232 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC6.83□□□□□ -1.32
CNTN3Q9P232 RPL39P6-201ENST00000448289 150 ntBASIC6.83□□□□□ -1.32
CNTN3Q9P232 VN1R38P-201ENST00000450265 887 ntBASIC6.83□□□□□ -1.32
CNTN3Q9P232 AL935212.3-201ENST00000450729 284 ntBASIC6.83□□□□□ -1.32
CNTN3Q9P232 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC6.83□□□□□ -1.32
CNTN3Q9P232 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC6.83□□□□□ -1.32
CNTN3Q9P232 RPL12P30-201ENST00000488389 499 ntBASIC6.83□□□□□ -1.32
CNTN3Q9P232 AC069439.1-201ENST00000494739 167 ntBASIC6.83□□□□□ -1.32
CNTN3Q9P232 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC6.83□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 69.8 ms