Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC5.75□□□□□ -1.49
COL20A1Q9P218 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.75□□□□□ -1.49
COL20A1Q9P218 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
COL20A1Q9P218 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
COL20A1Q9P218 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC5.75□□□□□ -1.49
COL20A1Q9P218 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC5.75□□□□□ -1.49
COL20A1Q9P218 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
COL20A1Q9P218 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
COL20A1Q9P218 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC5.75□□□□□ -1.49
COL20A1Q9P218 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
COL20A1Q9P218 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
COL20A1Q9P218 AP002530.1-201ENST00000405705 684 ntBASIC5.75□□□□□ -1.49
COL20A1Q9P218 AL390316.1-201ENST00000406279 553 ntBASIC5.75□□□□□ -1.49
COL20A1Q9P218 AF186996.5-201ENST00000418098 904 ntBASIC5.75□□□□□ -1.49
COL20A1Q9P218 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC5.75□□□□□ -1.49
COL20A1Q9P218 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC5.75□□□□□ -1.49
COL20A1Q9P218 NPM1P18-201ENST00000434232 732 ntBASIC5.75□□□□□ -1.49
COL20A1Q9P218 AC006466.1-201ENST00000438721 289 ntBASIC5.75□□□□□ -1.49
COL20A1Q9P218 AL353093.1-201ENST00000441292 436 ntBASIC5.75□□□□□ -1.49
COL20A1Q9P218 OR7E125P-201ENST00000443450 846 ntBASIC5.75□□□□□ -1.49
COL20A1Q9P218 AL137845.2-201ENST00000444292 988 ntBASIC5.75□□□□□ -1.49
COL20A1Q9P218 AC112498.1-201ENST00000444401 332 ntBASIC5.75□□□□□ -1.49
COL20A1Q9P218 BX842559.2-201ENST00000451418 605 ntBASIC5.75□□□□□ -1.49
COL20A1Q9P218 RPL7P32-201ENST00000457119 744 ntBASIC5.75□□□□□ -1.49
COL20A1Q9P218 SSR3-206ENST00000476217 807 ntTSL 3 BASIC5.75□□□□□ -1.49
COL20A1Q9P218 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC5.75□□□□□ -1.49
COL20A1Q9P218 AC020699.1-201ENST00000505161 445 ntBASIC5.75□□□□□ -1.49
COL20A1Q9P218 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC5.75□□□□□ -1.49
COL20A1Q9P218 PRELID3BP5-201ENST00000508612 460 ntBASIC5.75□□□□□ -1.49
COL20A1Q9P218 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.75□□□□□ -1.49
COL20A1Q9P218 CDH12P4-201ENST00000517835 295 ntBASIC5.75□□□□□ -1.49
COL20A1Q9P218 CDH12P3-201ENST00000517935 295 ntBASIC5.75□□□□□ -1.49
COL20A1Q9P218 CDH12P1-201ENST00000518435 295 ntBASIC5.75□□□□□ -1.49
COL20A1Q9P218 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC5.75□□□□□ -1.49
COL20A1Q9P218 EEF1A1P37-201ENST00000522748 715 ntBASIC5.75□□□□□ -1.49
COL20A1Q9P218 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC5.75□□□□□ -1.49
COL20A1Q9P218 OR10V3P-201ENST00000525712 725 ntBASIC5.75□□□□□ -1.49
COL20A1Q9P218 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC5.75□□□□□ -1.49
COL20A1Q9P218 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC5.75□□□□□ -1.49
COL20A1Q9P218 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC5.75□□□□□ -1.49
COL20A1Q9P218 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.75□□□□□ -1.49
COL20A1Q9P218 NMNAT1P1-201ENST00000554095 876 ntBASIC5.75□□□□□ -1.49
COL20A1Q9P218 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC5.75□□□□□ -1.49
COL20A1Q9P218 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC5.75□□□□□ -1.49
COL20A1Q9P218 RNU4-5P-201ENST00000607255 135 ntBASIC5.75□□□□□ -1.49
COL20A1Q9P218 AC108359.1-201ENST00000616451 1211 ntBASIC5.75□□□□□ -1.49
COL20A1Q9P218 AL121890.3-201ENST00000618494 516 ntBASIC5.75□□□□□ -1.49
COL20A1Q9P218 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC5.75□□□□□ -1.49
COL20A1Q9P218 AC004232.3-201ENST00000622977 525 ntBASIC5.75□□□□□ -1.49
COL20A1Q9P218 AC009120.7-201ENST00000623452 780 ntBASIC5.75□□□□□ -1.49
COL20A1Q9P218 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC5.75□□□□□ -1.49
COL20A1Q9P218 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
COL20A1Q9P218 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
COL20A1Q9P218 MAPK10-338ENST00000641647 3362 ntBASIC5.75□□□□□ -1.49
COL20A1Q9P218 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
COL20A1Q9P218 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
COL20A1Q9P218 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
COL20A1Q9P218 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
COL20A1Q9P218 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
COL20A1Q9P218 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC5.74□□□□□ -1.49
COL20A1Q9P218 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
COL20A1Q9P218 MTCO1P15-201ENST00000529569 1526 ntBASIC5.74□□□□□ -1.49
COL20A1Q9P218 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
COL20A1Q9P218 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
COL20A1Q9P218 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
COL20A1Q9P218 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC5.74□□□□□ -1.49
COL20A1Q9P218 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
COL20A1Q9P218 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
COL20A1Q9P218 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC5.74□□□□□ -1.49
COL20A1Q9P218 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
COL20A1Q9P218 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC5.74□□□□□ -1.49
COL20A1Q9P218 RN7SKP113-201ENST00000363891 295 ntBASIC5.74□□□□□ -1.49
COL20A1Q9P218 RNVU1-6-201ENST00000364688 164 ntBASIC5.74□□□□□ -1.49
COL20A1Q9P218 SNORA56-201ENST00000383966 129 ntBASIC5.74□□□□□ -1.49
COL20A1Q9P218 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
COL20A1Q9P218 CYB5AP4-201ENST00000396692 399 ntBASIC5.74□□□□□ -1.49
COL20A1Q9P218 AL035419.1-201ENST00000397037 564 ntBASIC5.74□□□□□ -1.49
COL20A1Q9P218 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC5.74□□□□□ -1.49
COL20A1Q9P218 HMGB3P7-201ENST00000400214 611 ntBASIC5.74□□□□□ -1.49
COL20A1Q9P218 GPS2P1-201ENST00000411761 986 ntBASIC5.74□□□□□ -1.49
COL20A1Q9P218 OR51B3P-201ENST00000412287 913 ntBASIC5.74□□□□□ -1.49
COL20A1Q9P218 VTA1P1-201ENST00000414044 866 ntBASIC5.74□□□□□ -1.49
COL20A1Q9P218 SLC4A1APP1-201ENST00000419995 602 ntBASIC5.74□□□□□ -1.49
COL20A1Q9P218 SLC9B1P4-201ENST00000421957 1288 ntBASIC5.74□□□□□ -1.49
COL20A1Q9P218 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC5.74□□□□□ -1.49
COL20A1Q9P218 FABP7P2-201ENST00000429946 379 ntBASIC5.74□□□□□ -1.49
COL20A1Q9P218 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC5.74□□□□□ -1.49
COL20A1Q9P218 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC5.74□□□□□ -1.49
COL20A1Q9P218 MTCO1P52-201ENST00000433928 531 ntBASIC5.74□□□□□ -1.49
COL20A1Q9P218 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC5.74□□□□□ -1.49
COL20A1Q9P218 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC5.74□□□□□ -1.49
COL20A1Q9P218 AC005412.2-201ENST00000492004 341 ntBASIC5.74□□□□□ -1.49
COL20A1Q9P218 RPL21P131-201ENST00000497298 483 ntBASIC5.74□□□□□ -1.49
COL20A1Q9P218 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC5.74□□□□□ -1.49
COL20A1Q9P218 AL671862.1-201ENST00000515851 349 ntBASIC5.74□□□□□ -1.49
COL20A1Q9P218 RNU6-311P-201ENST00000516224 102 ntBASIC5.74□□□□□ -1.49
COL20A1Q9P218 AC012339.2-201ENST00000523996 453 ntBASIC5.74□□□□□ -1.49
COL20A1Q9P218 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC5.74□□□□□ -1.49
COL20A1Q9P218 OR5AK3P-201ENST00000527486 1297 ntBASIC5.74□□□□□ -1.49
COL20A1Q9P218 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms