Protein–RNA interactions for Protein: Q9P1Y6

PHRF1, PHD and RING finger domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 1,649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1Q9P1Y6 TMEM30CP-203ENST00000637814 1035 ntBASIC5.88□□□□□ -1.47
PHRF1Q9P1Y6 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
PHRF1Q9P1Y6 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC5.88□□□□□ -1.47
PHRF1Q9P1Y6 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
PHRF1Q9P1Y6 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
PHRF1Q9P1Y6 5S_rRNA.1-201ENST00000364415 116 ntBASIC5.88□□□□□ -1.47
PHRF1Q9P1Y6 RNU6ATAC-201ENST00000408749 126 ntBASIC5.88□□□□□ -1.47
PHRF1Q9P1Y6 RNA5SP36-201ENST00000410197 133 ntBASIC5.88□□□□□ -1.47
PHRF1Q9P1Y6 RN7SKP202-201ENST00000410439 330 ntBASIC5.88□□□□□ -1.47
PHRF1Q9P1Y6 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC5.88□□□□□ -1.47
PHRF1Q9P1Y6 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC5.88□□□□□ -1.47
PHRF1Q9P1Y6 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC5.88□□□□□ -1.47
PHRF1Q9P1Y6 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
PHRF1Q9P1Y6 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.88□□□□□ -1.47
PHRF1Q9P1Y6 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC5.88□□□□□ -1.47
PHRF1Q9P1Y6 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC5.88□□□□□ -1.47
PHRF1Q9P1Y6 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC5.88□□□□□ -1.47
PHRF1Q9P1Y6 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.88□□□□□ -1.47
PHRF1Q9P1Y6 AC010503.3-201ENST00000594355 540 ntBASIC5.88□□□□□ -1.47
PHRF1Q9P1Y6 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
PHRF1Q9P1Y6 AC008013.2-202ENST00000637965 364 ntBASIC5.88□□□□□ -1.47
PHRF1Q9P1Y6 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC5.88□□□□□ -1.47
PHRF1Q9P1Y6 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
PHRF1Q9P1Y6 AC104623.2-202ENST00000623477 4002 ntBASIC5.88□□□□□ -1.47
PHRF1Q9P1Y6 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC5.88□□□□□ -1.47
PHRF1Q9P1Y6 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC5.88□□□□□ -1.47
PHRF1Q9P1Y6 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
PHRF1Q9P1Y6 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC5.87□□□□□ -1.47
PHRF1Q9P1Y6 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
PHRF1Q9P1Y6 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
PHRF1Q9P1Y6 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC5.87□□□□□ -1.47
PHRF1Q9P1Y6 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
PHRF1Q9P1Y6 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
PHRF1Q9P1Y6 NPM1P37-201ENST00000403105 874 ntBASIC5.87□□□□□ -1.47
PHRF1Q9P1Y6 FCF1P5-201ENST00000406490 482 ntBASIC5.87□□□□□ -1.47
PHRF1Q9P1Y6 RPS20P14-201ENST00000412545 360 ntBASIC5.87□□□□□ -1.47
PHRF1Q9P1Y6 BX119904.3-201ENST00000428194 957 ntBASIC5.87□□□□□ -1.47
PHRF1Q9P1Y6 RPEP2-201ENST00000432149 701 ntBASIC5.87□□□□□ -1.47
PHRF1Q9P1Y6 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC5.87□□□□□ -1.47
PHRF1Q9P1Y6 AC012671.1-201ENST00000451912 203 ntBASIC5.87□□□□□ -1.47
PHRF1Q9P1Y6 RPL23AP2-201ENST00000471227 466 ntBASIC5.87□□□□□ -1.47
PHRF1Q9P1Y6 DSTNP2-201ENST00000504533 515 ntBASIC5.87□□□□□ -1.47
PHRF1Q9P1Y6 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC5.87□□□□□ -1.47
PHRF1Q9P1Y6 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC5.87□□□□□ -1.47
PHRF1Q9P1Y6 AC026726.1-201ENST00000512859 601 ntBASIC5.87□□□□□ -1.47
PHRF1Q9P1Y6 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC5.87□□□□□ -1.47
PHRF1Q9P1Y6 AC087477.6-201ENST00000559595 843 ntBASIC5.87□□□□□ -1.47
PHRF1Q9P1Y6 OCLM-201ENST00000574641 884 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
PHRF1Q9P1Y6 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC5.87□□□□□ -1.47
PHRF1Q9P1Y6 AC015726.1-202ENST00000602532 475 ntTSL 5 BASIC5.87□□□□□ -1.47
PHRF1Q9P1Y6 AL136164.3-201ENST00000624429 3978 ntBASIC5.87□□□□□ -1.47
PHRF1Q9P1Y6 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
PHRF1Q9P1Y6 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5.87□□□□□ -1.47
PHRF1Q9P1Y6 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
PHRF1Q9P1Y6 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
PHRF1Q9P1Y6 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC5.87□□□□□ -1.47
PHRF1Q9P1Y6 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
PHRF1Q9P1Y6 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
PHRF1Q9P1Y6 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.87□□□□□ -1.47
PHRF1Q9P1Y6 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC5.86□□□□□ -1.47
PHRF1Q9P1Y6 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
PHRF1Q9P1Y6 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
PHRF1Q9P1Y6 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC5.86□□□□□ -1.47
PHRF1Q9P1Y6 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
PHRF1Q9P1Y6 AL133243.3-201ENST00000617415 3004 ntBASIC5.86□□□□□ -1.47
PHRF1Q9P1Y6 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.86□□□□□ -1.47
PHRF1Q9P1Y6 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC5.86□□□□□ -1.47
PHRF1Q9P1Y6 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
PHRF1Q9P1Y6 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.86□□□□□ -1.47
PHRF1Q9P1Y6 AL355852.1-201ENST00000454081 1771 ntBASIC5.86□□□□□ -1.47
PHRF1Q9P1Y6 TPT1P2-201ENST00000413105 503 ntBASIC5.86□□□□□ -1.47
PHRF1Q9P1Y6 UBE2V1P3-201ENST00000439651 417 ntBASIC5.86□□□□□ -1.47
PHRF1Q9P1Y6 PRSS3P4-201ENST00000453323 162 ntBASIC5.86□□□□□ -1.47
PHRF1Q9P1Y6 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
PHRF1Q9P1Y6 AC090602.1-201ENST00000469695 252 ntBASIC5.86□□□□□ -1.47
PHRF1Q9P1Y6 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC5.86□□□□□ -1.47
PHRF1Q9P1Y6 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC5.86□□□□□ -1.47
PHRF1Q9P1Y6 AC053481.4-201ENST00000583164 216 ntBASIC5.86□□□□□ -1.47
PHRF1Q9P1Y6 ADAD1P2-201ENST00000588476 646 ntBASIC5.86□□□□□ -1.47
PHRF1Q9P1Y6 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC5.86□□□□□ -1.47
PHRF1Q9P1Y6 FP325313.1-201ENST00000638228 703 ntBASIC5.86□□□□□ -1.47
PHRF1Q9P1Y6 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.86□□□□□ -1.47
PHRF1Q9P1Y6 AP000641.1-201ENST00000531988 1639 ntBASIC5.86□□□□□ -1.47
PHRF1Q9P1Y6 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC5.86□□□□□ -1.47
PHRF1Q9P1Y6 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
PHRF1Q9P1Y6 AC068870.3-201ENST00000625077 2536 ntBASIC5.86□□□□□ -1.47
PHRF1Q9P1Y6 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
PHRF1Q9P1Y6 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
PHRF1Q9P1Y6 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
PHRF1Q9P1Y6 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
PHRF1Q9P1Y6 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
PHRF1Q9P1Y6 AC106871.1-201ENST00000568324 3102 ntBASIC5.86□□□□□ -1.47
PHRF1Q9P1Y6 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC5.85□□□□□ -1.47
PHRF1Q9P1Y6 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC5.85□□□□□ -1.47
PHRF1Q9P1Y6 GPATCH2-202ENST00000366935 5851 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
PHRF1Q9P1Y6 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
PHRF1Q9P1Y6 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
PHRF1Q9P1Y6 SNORA62.3-201ENST00000365110 153 ntBASIC5.85□□□□□ -1.47
PHRF1Q9P1Y6 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC5.85□□□□□ -1.47
PHRF1Q9P1Y6 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC5.85□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 126.8 ms