Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 MIR5096-201ENST00000583713 70 ntBASIC4.9□□□□□ -1.63
TM9SF3Q9HD45 AC018695.5-201ENST00000605872 315 ntBASIC4.9□□□□□ -1.63
TM9SF3Q9HD45 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
TM9SF3Q9HD45 AL590410.1-201ENST00000617925 333 ntBASIC4.9□□□□□ -1.63
TM9SF3Q9HD45 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC4.9□□□□□ -1.63
TM9SF3Q9HD45 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.9□□□□□ -1.63
TM9SF3Q9HD45 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
TM9SF3Q9HD45 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.9□□□□□ -1.63
TM9SF3Q9HD45 Z98755.1-201ENST00000407015 1384 ntBASIC4.9□□□□□ -1.63
TM9SF3Q9HD45 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.63
TM9SF3Q9HD45 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
TM9SF3Q9HD45 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC4.89□□□□□ -1.63
TM9SF3Q9HD45 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
TM9SF3Q9HD45 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
TM9SF3Q9HD45 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
TM9SF3Q9HD45 RNU6-146P-201ENST00000384602 108 ntBASIC4.89□□□□□ -1.63
TM9SF3Q9HD45 BX510359.2-201ENST00000417920 305 ntBASIC4.89□□□□□ -1.63
TM9SF3Q9HD45 OR2AH1P-201ENST00000425717 928 ntBASIC4.89□□□□□ -1.63
TM9SF3Q9HD45 NRBF2P3-201ENST00000432731 865 ntBASIC4.89□□□□□ -1.63
TM9SF3Q9HD45 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC4.89□□□□□ -1.63
TM9SF3Q9HD45 AC004980.3-201ENST00000447046 365 ntBASIC4.89□□□□□ -1.63
TM9SF3Q9HD45 BTF3P6-201ENST00000448054 499 ntBASIC4.89□□□□□ -1.63
TM9SF3Q9HD45 CYCSP42-201ENST00000450823 238 ntBASIC4.89□□□□□ -1.63
TM9SF3Q9HD45 RN7SL385P-201ENST00000468873 276 ntBASIC4.89□□□□□ -1.63
TM9SF3Q9HD45 AC116562.1-201ENST00000485355 781 ntBASIC4.89□□□□□ -1.63
TM9SF3Q9HD45 AC111000.3-201ENST00000508057 576 ntBASIC4.89□□□□□ -1.63
TM9SF3Q9HD45 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC4.89□□□□□ -1.63
TM9SF3Q9HD45 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
TM9SF3Q9HD45 SOX5P1-201ENST00000524155 1127 ntBASIC4.89□□□□□ -1.63
TM9SF3Q9HD45 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC4.89□□□□□ -1.63
TM9SF3Q9HD45 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC4.89□□□□□ -1.63
TM9SF3Q9HD45 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC4.89□□□□□ -1.63
TM9SF3Q9HD45 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.89□□□□□ -1.63
TM9SF3Q9HD45 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.89□□□□□ -1.63
TM9SF3Q9HD45 AC011453.2-201ENST00000603737 729 ntBASIC4.89□□□□□ -1.63
TM9SF3Q9HD45 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC4.89□□□□□ -1.63
TM9SF3Q9HD45 AC019193.2-201ENST00000610012 634 ntBASIC4.89□□□□□ -1.63
TM9SF3Q9HD45 AC015914.2-201ENST00000618167 288 ntBASIC4.89□□□□□ -1.63
TM9SF3Q9HD45 AC092159.4-201ENST00000624944 550 ntBASIC4.89□□□□□ -1.63
TM9SF3Q9HD45 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
TM9SF3Q9HD45 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
TM9SF3Q9HD45 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
TM9SF3Q9HD45 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
TM9SF3Q9HD45 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
TM9SF3Q9HD45 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
TM9SF3Q9HD45 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.88□□□□□ -1.63
TM9SF3Q9HD45 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.88□□□□□ -1.63
TM9SF3Q9HD45 ECM1P2-201ENST00000503354 1577 ntBASIC4.88□□□□□ -1.63
TM9SF3Q9HD45 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.88□□□□□ -1.63
TM9SF3Q9HD45 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.88□□□□□ -1.63
TM9SF3Q9HD45 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC4.88□□□□□ -1.63
TM9SF3Q9HD45 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
TM9SF3Q9HD45 RPS3AP23-201ENST00000401762 784 ntBASIC4.88□□□□□ -1.63
TM9SF3Q9HD45 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
TM9SF3Q9HD45 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.88□□□□□ -1.63
TM9SF3Q9HD45 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC4.88□□□□□ -1.63
TM9SF3Q9HD45 COX6CP13-201ENST00000428703 226 ntBASIC4.88□□□□□ -1.63
TM9SF3Q9HD45 AL392003.1-201ENST00000434394 243 ntBASIC4.88□□□□□ -1.63
TM9SF3Q9HD45 AC005154.2-201ENST00000438110 379 ntBASIC4.88□□□□□ -1.63
TM9SF3Q9HD45 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
TM9SF3Q9HD45 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC4.88□□□□□ -1.63
TM9SF3Q9HD45 MRPL35P2-201ENST00000448009 511 ntBASIC4.88□□□□□ -1.63
TM9SF3Q9HD45 BUD31P2-201ENST00000449374 300 ntBASIC4.88□□□□□ -1.63
TM9SF3Q9HD45 HMGB1P4-201ENST00000455362 567 ntBASIC4.88□□□□□ -1.63
TM9SF3Q9HD45 snoU13.1-201ENST00000459157 104 ntBASIC4.88□□□□□ -1.63
TM9SF3Q9HD45 SEPT7P6-201ENST00000469999 1143 ntBASIC4.88□□□□□ -1.63
TM9SF3Q9HD45 STRADBP1-201ENST00000478954 1281 ntBASIC4.88□□□□□ -1.63
TM9SF3Q9HD45 METTL15P1-201ENST00000481421 1045 ntBASIC4.88□□□□□ -1.63
TM9SF3Q9HD45 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.88□□□□□ -1.63
TM9SF3Q9HD45 AC034205.1-201ENST00000520621 638 ntBASIC4.88□□□□□ -1.63
TM9SF3Q9HD45 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC4.88□□□□□ -1.63
TM9SF3Q9HD45 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC4.88□□□□□ -1.63
TM9SF3Q9HD45 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.88□□□□□ -1.63
TM9SF3Q9HD45 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC4.88□□□□□ -1.63
TM9SF3Q9HD45 MIR4284-201ENST00000578924 81 ntBASIC4.88□□□□□ -1.63
TM9SF3Q9HD45 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC4.88□□□□□ -1.63
TM9SF3Q9HD45 FAM60CP-201ENST00000591086 664 ntBASIC4.88□□□□□ -1.63
TM9SF3Q9HD45 RPL26P30-202ENST00000602923 645 ntBASIC4.88□□□□□ -1.63
TM9SF3Q9HD45 AL137246.1-201ENST00000607072 977 ntBASIC4.88□□□□□ -1.63
TM9SF3Q9HD45 NF1P10-201ENST00000613227 742 ntBASIC4.88□□□□□ -1.63
TM9SF3Q9HD45 MIR6758-201ENST00000620653 63 ntBASIC4.88□□□□□ -1.63
TM9SF3Q9HD45 AC019206.1-201ENST00000621938 425 ntBASIC4.88□□□□□ -1.63
TM9SF3Q9HD45 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
TM9SF3Q9HD45 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.88□□□□□ -1.63
TM9SF3Q9HD45 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.88□□□□□ -1.63
TM9SF3Q9HD45 AC114546.3-201ENST00000623582 1734 ntBASIC4.88□□□□□ -1.63
TM9SF3Q9HD45 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
TM9SF3Q9HD45 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC4.87□□□□□ -1.63
TM9SF3Q9HD45 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
TM9SF3Q9HD45 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC4.87□□□□□ -1.63
TM9SF3Q9HD45 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.87□□□□□ -1.63
TM9SF3Q9HD45 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
TM9SF3Q9HD45 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
TM9SF3Q9HD45 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
TM9SF3Q9HD45 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
TM9SF3Q9HD45 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
TM9SF3Q9HD45 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
TM9SF3Q9HD45 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC4.87□□□□□ -1.63
TM9SF3Q9HD45 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
TM9SF3Q9HD45 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms