Protein–RNA interactions for Protein: Q9H6U6

BCAS3, Breast carcinoma-amplified sequence 3, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCAS3Q9H6U6 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC6.25□□□□□ -1.41
BCAS3Q9H6U6 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC6.25□□□□□ -1.41
BCAS3Q9H6U6 snoU13.29-201ENST00000459370 104 ntBASIC6.25□□□□□ -1.41
BCAS3Q9H6U6 RN7SL583P-201ENST00000475692 287 ntBASIC6.25□□□□□ -1.41
BCAS3Q9H6U6 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC6.25□□□□□ -1.41
BCAS3Q9H6U6 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
BCAS3Q9H6U6 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
BCAS3Q9H6U6 AC112198.1-201ENST00000505369 1220 ntBASIC6.25□□□□□ -1.41
BCAS3Q9H6U6 MTATP6P22-201ENST00000507369 598 ntBASIC6.25□□□□□ -1.41
BCAS3Q9H6U6 ATG10-208ENST00000513634 618 ntTSL 2 BASIC6.25□□□□□ -1.41
BCAS3Q9H6U6 Y_RNA.695-201ENST00000516715 107 ntBASIC6.25□□□□□ -1.41
BCAS3Q9H6U6 SEPT10P1-201ENST00000517342 1162 ntBASIC6.25□□□□□ -1.41
BCAS3Q9H6U6 NDUFA5P2-201ENST00000519723 344 ntBASIC6.25□□□□□ -1.41
BCAS3Q9H6U6 HIGD1AP10-201ENST00000527837 282 ntBASIC6.25□□□□□ -1.41
BCAS3Q9H6U6 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC6.25□□□□□ -1.41
BCAS3Q9H6U6 OR11H3P-201ENST00000554547 982 ntBASIC6.25□□□□□ -1.41
BCAS3Q9H6U6 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC6.25□□□□□ -1.41
BCAS3Q9H6U6 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC6.25□□□□□ -1.41
BCAS3Q9H6U6 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
BCAS3Q9H6U6 AC125494.3-201ENST00000602759 455 ntBASIC6.25□□□□□ -1.41
BCAS3Q9H6U6 AP000403.1-201ENST00000603349 851 ntBASIC6.25□□□□□ -1.41
BCAS3Q9H6U6 AC017083.3-201ENST00000609955 700 ntBASIC6.25□□□□□ -1.41
BCAS3Q9H6U6 AL136295.6-201ENST00000610486 658 ntBASIC6.25□□□□□ -1.41
BCAS3Q9H6U6 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC6.25□□□□□ -1.41
BCAS3Q9H6U6 AC025588.4-201ENST00000615802 908 ntBASIC6.25□□□□□ -1.41
BCAS3Q9H6U6 AC009509.4-201ENST00000619202 509 ntBASIC6.25□□□□□ -1.41
BCAS3Q9H6U6 AC018445.2-201ENST00000622987 260 ntBASIC6.25□□□□□ -1.41
BCAS3Q9H6U6 AC068137.3-201ENST00000639191 341 ntBASIC6.25□□□□□ -1.41
BCAS3Q9H6U6 AC073869.6-201ENST00000640656 341 ntBASIC6.25□□□□□ -1.41
BCAS3Q9H6U6 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
BCAS3Q9H6U6 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC6.25□□□□□ -1.41
BCAS3Q9H6U6 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
BCAS3Q9H6U6 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
BCAS3Q9H6U6 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
BCAS3Q9H6U6 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC6.25□□□□□ -1.41
BCAS3Q9H6U6 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
BCAS3Q9H6U6 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
BCAS3Q9H6U6 AL590763.1-201ENST00000398297 1545 ntBASIC6.25□□□□□ -1.41
BCAS3Q9H6U6 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
BCAS3Q9H6U6 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
BCAS3Q9H6U6 AL353796.1-201ENST00000561542 3241 ntBASIC6.24□□□□□ -1.41
BCAS3Q9H6U6 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
BCAS3Q9H6U6 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
BCAS3Q9H6U6 NCLP2-201ENST00000416078 1462 ntBASIC6.24□□□□□ -1.41
BCAS3Q9H6U6 RNA5SP335-201ENST00000363817 110 ntBASIC6.24□□□□□ -1.41
BCAS3Q9H6U6 RN7SKP6-201ENST00000364795 319 ntBASIC6.24□□□□□ -1.41
BCAS3Q9H6U6 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC6.24□□□□□ -1.41
BCAS3Q9H6U6 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC6.24□□□□□ -1.41
BCAS3Q9H6U6 CDC123-202ENST00000378900 933 ntTSL 5 BASIC6.24□□□□□ -1.41
BCAS3Q9H6U6 RNU6-549P-201ENST00000384433 107 ntBASIC6.24□□□□□ -1.41
BCAS3Q9H6U6 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
BCAS3Q9H6U6 SNORD65C-201ENST00000390962 71 ntBASIC6.24□□□□□ -1.41
BCAS3Q9H6U6 DNAJC19P6-201ENST00000401853 280 ntBASIC6.24□□□□□ -1.41
BCAS3Q9H6U6 AL009179.1-201ENST00000406085 265 ntBASIC6.24□□□□□ -1.41
BCAS3Q9H6U6 FIGN-202ENST00000409634 746 ntTSL 5 BASIC6.24□□□□□ -1.41
BCAS3Q9H6U6 RN7SKP279-201ENST00000411383 298 ntBASIC6.24□□□□□ -1.41
BCAS3Q9H6U6 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC6.24□□□□□ -1.41
BCAS3Q9H6U6 OR4K6P-201ENST00000416478 897 ntBASIC6.24□□□□□ -1.41
BCAS3Q9H6U6 NPM1P11-201ENST00000417106 855 ntBASIC6.24□□□□□ -1.41
BCAS3Q9H6U6 AC007394.1-201ENST00000421941 531 ntBASIC6.24□□□□□ -1.41
BCAS3Q9H6U6 DPPA2P1-201ENST00000428060 556 ntBASIC6.24□□□□□ -1.41
BCAS3Q9H6U6 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC6.24□□□□□ -1.41
BCAS3Q9H6U6 AL627308.1-201ENST00000435693 821 ntBASIC6.24□□□□□ -1.41
BCAS3Q9H6U6 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC6.24□□□□□ -1.41
BCAS3Q9H6U6 AL354941.1-201ENST00000438600 464 ntBASIC6.24□□□□□ -1.41
BCAS3Q9H6U6 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC6.24□□□□□ -1.41
BCAS3Q9H6U6 HMGB1P48-201ENST00000446155 598 ntBASIC6.24□□□□□ -1.41
BCAS3Q9H6U6 AC115223.1-201ENST00000466377 870 ntBASIC6.24□□□□□ -1.41
BCAS3Q9H6U6 RN7SL51P-201ENST00000468230 285 ntBASIC6.24□□□□□ -1.41
BCAS3Q9H6U6 CCDC75P1-201ENST00000469247 791 ntBASIC6.24□□□□□ -1.41
BCAS3Q9H6U6 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
BCAS3Q9H6U6 AC093270.2-201ENST00000486157 792 ntBASIC6.24□□□□□ -1.41
BCAS3Q9H6U6 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC6.24□□□□□ -1.41
BCAS3Q9H6U6 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
BCAS3Q9H6U6 OR5M14P-201ENST00000506803 618 ntBASIC6.24□□□□□ -1.41
BCAS3Q9H6U6 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC6.24□□□□□ -1.41
BCAS3Q9H6U6 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC6.24□□□□□ -1.41
BCAS3Q9H6U6 AC010285.3-201ENST00000511668 676 ntBASIC6.24□□□□□ -1.41
BCAS3Q9H6U6 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC6.24□□□□□ -1.41
BCAS3Q9H6U6 MTCO3P15-201ENST00000526563 574 ntBASIC6.24□□□□□ -1.41
BCAS3Q9H6U6 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
BCAS3Q9H6U6 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC6.24□□□□□ -1.41
BCAS3Q9H6U6 NPM1P5-201ENST00000557228 838 ntBASIC6.24□□□□□ -1.41
BCAS3Q9H6U6 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC6.24□□□□□ -1.41
BCAS3Q9H6U6 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC6.24□□□□□ -1.41
BCAS3Q9H6U6 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC6.24□□□□□ -1.41
BCAS3Q9H6U6 AC090181.2-201ENST00000602975 672 ntBASIC6.24□□□□□ -1.41
BCAS3Q9H6U6 AC124312.6-202ENST00000623624 418 ntBASIC6.24□□□□□ -1.41
BCAS3Q9H6U6 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC6.24□□□□□ -1.41
BCAS3Q9H6U6 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC6.24□□□□□ -1.41
BCAS3Q9H6U6 ZNF663P-202ENST00000641770 1131 ntBASIC6.24□□□□□ -1.41
BCAS3Q9H6U6 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC6.24□□□□□ -1.41
BCAS3Q9H6U6 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC6.24□□□□□ -1.41
BCAS3Q9H6U6 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC6.24□□□□□ -1.41
BCAS3Q9H6U6 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
BCAS3Q9H6U6 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
BCAS3Q9H6U6 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
BCAS3Q9H6U6 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC6.23□□□□□ -1.41
BCAS3Q9H6U6 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC6.23□□□□□ -1.41
BCAS3Q9H6U6 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC6.23□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms