Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC5.8□□□□□ -1.48
VPS11Q9H270 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC5.8□□□□□ -1.48
VPS11Q9H270 AC011611.5-201ENST00000552477 578 ntBASIC5.8□□□□□ -1.48
VPS11Q9H270 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
VPS11Q9H270 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC5.8□□□□□ -1.48
VPS11Q9H270 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC5.8□□□□□ -1.48
VPS11Q9H270 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC5.8□□□□□ -1.48
VPS11Q9H270 RNU4-89P-201ENST00000607443 133 ntBASIC5.8□□□□□ -1.48
VPS11Q9H270 AC073114.1-201ENST00000612027 490 ntBASIC5.8□□□□□ -1.48
VPS11Q9H270 AC008083.4-201ENST00000615076 444 ntBASIC5.8□□□□□ -1.48
VPS11Q9H270 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC5.8□□□□□ -1.48
VPS11Q9H270 AC104985.2-201ENST00000620598 500 ntBASIC5.8□□□□□ -1.48
VPS11Q9H270 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
VPS11Q9H270 AL138693.1-201ENST00000622219 129 ntBASIC5.8□□□□□ -1.48
VPS11Q9H270 AC007490.1-201ENST00000624321 703 ntBASIC5.8□□□□□ -1.48
VPS11Q9H270 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC5.8□□□□□ -1.48
VPS11Q9H270 AC073488.6-201ENST00000632293 754 ntBASIC5.8□□□□□ -1.48
VPS11Q9H270 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.8□□□□□ -1.48
VPS11Q9H270 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.8□□□□□ -1.48
VPS11Q9H270 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.8□□□□□ -1.48
VPS11Q9H270 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
VPS11Q9H270 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.8□□□□□ -1.48
VPS11Q9H270 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
VPS11Q9H270 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC5.8□□□□□ -1.48
VPS11Q9H270 ZNF849P-201ENST00000594711 1566 ntBASIC5.8□□□□□ -1.48
VPS11Q9H270 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
VPS11Q9H270 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
VPS11Q9H270 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
VPS11Q9H270 AC004158.1-201ENST00000564508 4319 ntBASIC5.8□□□□□ -1.48
VPS11Q9H270 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
VPS11Q9H270 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
VPS11Q9H270 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
VPS11Q9H270 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC5.79□□□□□ -1.48
VPS11Q9H270 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
VPS11Q9H270 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.79□□□□□ -1.48
VPS11Q9H270 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.79□□□□□ -1.48
VPS11Q9H270 DDX18P4-201ENST00000511690 1966 ntBASIC5.79□□□□□ -1.48
VPS11Q9H270 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
VPS11Q9H270 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC5.79□□□□□ -1.48
VPS11Q9H270 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.79□□□□□ -1.48
VPS11Q9H270 SELENOWP1-201ENST00000322792 252 ntBASIC5.79□□□□□ -1.48
VPS11Q9H270 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
VPS11Q9H270 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
VPS11Q9H270 Y_RNA.813-201ENST00000364639 102 ntBASIC5.79□□□□□ -1.48
VPS11Q9H270 Y_RNA.303-201ENST00000364998 94 ntBASIC5.79□□□□□ -1.48
VPS11Q9H270 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
VPS11Q9H270 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
VPS11Q9H270 RNU6-83P-201ENST00000384568 112 ntBASIC5.79□□□□□ -1.48
VPS11Q9H270 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
VPS11Q9H270 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
VPS11Q9H270 AL035422.1-201ENST00000414193 397 ntBASIC5.79□□□□□ -1.48
VPS11Q9H270 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC5.79□□□□□ -1.48
VPS11Q9H270 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC5.79□□□□□ -1.48
VPS11Q9H270 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC5.79□□□□□ -1.48
VPS11Q9H270 ZNF863P-201ENST00000426746 417 ntBASIC5.79□□□□□ -1.48
VPS11Q9H270 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC5.79□□□□□ -1.48
VPS11Q9H270 Z74696.2-201ENST00000436514 498 ntBASIC5.79□□□□□ -1.48
VPS11Q9H270 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC5.79□□□□□ -1.48
VPS11Q9H270 AL353662.1-201ENST00000439099 327 ntBASIC5.79□□□□□ -1.48
VPS11Q9H270 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC5.79□□□□□ -1.48
VPS11Q9H270 AP000936.2-201ENST00000447151 681 ntBASIC5.79□□□□□ -1.48
VPS11Q9H270 EPS15P1-201ENST00000448836 336 ntBASIC5.79□□□□□ -1.48
VPS11Q9H270 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC5.79□□□□□ -1.48
VPS11Q9H270 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC5.79□□□□□ -1.48
VPS11Q9H270 AL035407.2-201ENST00000454090 378 ntBASIC5.79□□□□□ -1.48
VPS11Q9H270 RPL7AP52-201ENST00000458096 790 ntBASIC5.79□□□□□ -1.48
VPS11Q9H270 AC104687.1-201ENST00000485829 412 ntBASIC5.79□□□□□ -1.48
VPS11Q9H270 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC5.79□□□□□ -1.48
VPS11Q9H270 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC5.79□□□□□ -1.48
VPS11Q9H270 RNU6-232P-201ENST00000517144 64 ntBASIC5.79□□□□□ -1.48
VPS11Q9H270 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC5.79□□□□□ -1.48
VPS11Q9H270 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC5.79□□□□□ -1.48
VPS11Q9H270 FAU-203ENST00000525297 355 ntTSL 5 BASIC5.79□□□□□ -1.48
VPS11Q9H270 ERP27-202ENST00000540097 993 ntTSL 2 BASIC5.79□□□□□ -1.48
VPS11Q9H270 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC5.79□□□□□ -1.48
VPS11Q9H270 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC5.79□□□□□ -1.48
VPS11Q9H270 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC5.79□□□□□ -1.48
VPS11Q9H270 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC5.79□□□□□ -1.48
VPS11Q9H270 AC019322.1-201ENST00000571869 389 ntBASIC5.79□□□□□ -1.48
VPS11Q9H270 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.79□□□□□ -1.48
VPS11Q9H270 MIR4701-201ENST00000583094 63 ntBASIC5.79□□□□□ -1.48
VPS11Q9H270 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC5.79□□□□□ -1.48
VPS11Q9H270 RN7SL622P-201ENST00000585292 275 ntBASIC5.79□□□□□ -1.48
VPS11Q9H270 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC5.79□□□□□ -1.48
VPS11Q9H270 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC5.79□□□□□ -1.48
VPS11Q9H270 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
VPS11Q9H270 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC5.79□□□□□ -1.48
VPS11Q9H270 Z82195.1-201ENST00000604558 398 ntBASIC5.79□□□□□ -1.48
VPS11Q9H270 AC024060.1-201ENST00000607052 494 ntBASIC5.79□□□□□ -1.48
VPS11Q9H270 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC5.79□□□□□ -1.48
VPS11Q9H270 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
VPS11Q9H270 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
VPS11Q9H270 AL162574.1-201ENST00000615702 950 ntBASIC5.79□□□□□ -1.48
VPS11Q9H270 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC5.79□□□□□ -1.48
VPS11Q9H270 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC5.79□□□□□ -1.48
VPS11Q9H270 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC5.79□□□□□ -1.48
VPS11Q9H270 OR8G3P-202ENST00000641572 1255 ntBASIC5.79□□□□□ -1.48
VPS11Q9H270 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC5.79□□□□□ -1.48
VPS11Q9H270 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC5.79□□□□□ -1.48
VPS11Q9H270 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC5.79□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 328.3 ms