Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.82□□□□□ -1.64
TRIM4Q9C037 AL121873.1-201ENST00000616013 524 ntBASIC4.82□□□□□ -1.64
TRIM4Q9C037 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC4.82□□□□□ -1.64
TRIM4Q9C037 AC239809.3-202ENST00000628902 686 ntTSL 5 BASIC4.82□□□□□ -1.64
TRIM4Q9C037 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
TRIM4Q9C037 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
TRIM4Q9C037 AL445487.1-201ENST00000415694 1580 ntBASIC4.82□□□□□ -1.64
TRIM4Q9C037 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC4.82□□□□□ -1.64
TRIM4Q9C037 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
TRIM4Q9C037 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC4.82□□□□□ -1.64
TRIM4Q9C037 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.82□□□□□ -1.64
TRIM4Q9C037 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC4.81□□□□□ -1.64
TRIM4Q9C037 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC4.81□□□□□ -1.64
TRIM4Q9C037 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
TRIM4Q9C037 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC4.81□□□□□ -1.64
TRIM4Q9C037 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC4.81□□□□□ -1.64
TRIM4Q9C037 AC019155.1-201ENST00000382242 574 ntBASIC4.81□□□□□ -1.64
TRIM4Q9C037 MIR195-201ENST00000385194 87 ntBASIC4.81□□□□□ -1.64
TRIM4Q9C037 MIR137-201ENST00000385223 102 ntBASIC4.81□□□□□ -1.64
TRIM4Q9C037 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC4.81□□□□□ -1.64
TRIM4Q9C037 TMBIM7P-201ENST00000418074 855 ntBASIC4.81□□□□□ -1.64
TRIM4Q9C037 AC004448.2-201ENST00000422360 586 ntBASIC4.81□□□□□ -1.64
TRIM4Q9C037 PDSS1P1-201ENST00000422953 1114 ntBASIC4.81□□□□□ -1.64
TRIM4Q9C037 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC4.81□□□□□ -1.64
TRIM4Q9C037 BMS1P19-201ENST00000433925 393 ntBASIC4.81□□□□□ -1.64
TRIM4Q9C037 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC4.81□□□□□ -1.64
TRIM4Q9C037 RPS29P10-201ENST00000439197 166 ntBASIC4.81□□□□□ -1.64
TRIM4Q9C037 RPS26P2-201ENST00000440331 348 ntBASIC4.81□□□□□ -1.64
TRIM4Q9C037 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
TRIM4Q9C037 GEMIN8P3-201ENST00000445417 720 ntBASIC4.81□□□□□ -1.64
TRIM4Q9C037 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC4.81□□□□□ -1.64
TRIM4Q9C037 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC4.81□□□□□ -1.64
TRIM4Q9C037 AC093166.2-201ENST00000455969 1017 ntBASIC4.81□□□□□ -1.64
TRIM4Q9C037 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.81□□□□□ -1.64
TRIM4Q9C037 AC083829.1-201ENST00000503756 657 ntBASIC4.81□□□□□ -1.64
TRIM4Q9C037 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC4.81□□□□□ -1.64
TRIM4Q9C037 GTF2F2P1-201ENST00000511083 675 ntBASIC4.81□□□□□ -1.64
TRIM4Q9C037 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC4.81□□□□□ -1.64
TRIM4Q9C037 AC090281.1-201ENST00000523019 276 ntBASIC4.81□□□□□ -1.64
TRIM4Q9C037 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC4.81□□□□□ -1.64
TRIM4Q9C037 BNIP3P5-201ENST00000562290 498 ntBASIC4.81□□□□□ -1.64
TRIM4Q9C037 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC4.81□□□□□ -1.64
TRIM4Q9C037 MIR4277-201ENST00000578298 84 ntBASIC4.81□□□□□ -1.64
TRIM4Q9C037 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC4.81□□□□□ -1.64
TRIM4Q9C037 AC011453.2-201ENST00000603737 729 ntBASIC4.81□□□□□ -1.64
TRIM4Q9C037 AL139041.1-201ENST00000605480 610 ntBASIC4.81□□□□□ -1.64
TRIM4Q9C037 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC4.81□□□□□ -1.64
TRIM4Q9C037 AP001521.2-201ENST00000608772 546 ntBASIC4.81□□□□□ -1.64
TRIM4Q9C037 AC026368.1-201ENST00000614934 690 ntBASIC4.81□□□□□ -1.64
TRIM4Q9C037 MIR6780A-201ENST00000615089 68 ntBASIC4.81□□□□□ -1.64
TRIM4Q9C037 AP003499.2-201ENST00000624100 483 ntBASIC4.81□□□□□ -1.64
TRIM4Q9C037 MIR6830-201ENST00000636015 70 ntBASIC4.81□□□□□ -1.64
TRIM4Q9C037 AC135068.12-201ENST00000637370 931 ntBASIC4.81□□□□□ -1.64
TRIM4Q9C037 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC4.81□□□□□ -1.64
TRIM4Q9C037 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.81□□□□□ -1.64
TRIM4Q9C037 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.81□□□□□ -1.64
TRIM4Q9C037 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.81□□□□□ -1.64
TRIM4Q9C037 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.81□□□□□ -1.64
TRIM4Q9C037 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.81□□□□□ -1.64
TRIM4Q9C037 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
TRIM4Q9C037 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
TRIM4Q9C037 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
TRIM4Q9C037 RNU1-108P-201ENST00000362556 161 ntBASIC4.8□□□□□ -1.64
TRIM4Q9C037 RNU6-984P-201ENST00000363236 109 ntBASIC4.8□□□□□ -1.64
TRIM4Q9C037 CEACAMP8-201ENST00000413902 580 ntBASIC4.8□□□□□ -1.64
TRIM4Q9C037 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC4.8□□□□□ -1.64
TRIM4Q9C037 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.8□□□□□ -1.64
TRIM4Q9C037 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC4.8□□□□□ -1.64
TRIM4Q9C037 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC4.8□□□□□ -1.64
TRIM4Q9C037 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC4.8□□□□□ -1.64
TRIM4Q9C037 AC112498.1-201ENST00000444401 332 ntBASIC4.8□□□□□ -1.64
TRIM4Q9C037 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC4.8□□□□□ -1.64
TRIM4Q9C037 RPS17P2-201ENST00000461663 408 ntBASIC4.8□□□□□ -1.64
TRIM4Q9C037 AC107015.1-201ENST00000466902 747 ntBASIC4.8□□□□□ -1.64
TRIM4Q9C037 AC135999.1-201ENST00000478962 479 ntBASIC4.8□□□□□ -1.64
TRIM4Q9C037 AC111000.3-201ENST00000508057 576 ntBASIC4.8□□□□□ -1.64
TRIM4Q9C037 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC4.8□□□□□ -1.64
TRIM4Q9C037 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC4.8□□□□□ -1.64
TRIM4Q9C037 RN7SKP21-201ENST00000516503 220 ntBASIC4.8□□□□□ -1.64
TRIM4Q9C037 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC4.8□□□□□ -1.64
TRIM4Q9C037 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC4.8□□□□□ -1.64
TRIM4Q9C037 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC4.8□□□□□ -1.64
TRIM4Q9C037 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC4.8□□□□□ -1.64
TRIM4Q9C037 CYCSP40-201ENST00000575927 294 ntBASIC4.8□□□□□ -1.64
TRIM4Q9C037 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC4.8□□□□□ -1.64
TRIM4Q9C037 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC4.8□□□□□ -1.64
TRIM4Q9C037 AC092653.1-201ENST00000608509 531 ntBASIC4.8□□□□□ -1.64
TRIM4Q9C037 AC234782.5-201ENST00000617723 324 ntBASIC4.8□□□□□ -1.64
TRIM4Q9C037 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC4.8□□□□□ -1.64
TRIM4Q9C037 BMS1P21-201ENST00000634565 365 ntBASIC4.8□□□□□ -1.64
TRIM4Q9C037 ZNRD1ASP-221ENST00000637794 1074 ntBASIC4.8□□□□□ -1.64
TRIM4Q9C037 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.8□□□□□ -1.64
TRIM4Q9C037 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC4.8□□□□□ -1.64
TRIM4Q9C037 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.8□□□□□ -1.64
TRIM4Q9C037 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
TRIM4Q9C037 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
TRIM4Q9C037 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
TRIM4Q9C037 ALB-214ENST00000509063 1911 ntTSL 5 BASIC4.8□□□□□ -1.64
TRIM4Q9C037 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
TRIM4Q9C037 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms