Protein–RNA interactions for Protein: Q9BY11

PACSIN1, Protein kinase C and casein kinase substrate in neurons protein 1, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN1Q9BY11 MIR589-201ENST00000385238 99 ntBASIC5.65□□□□□ -1.5
PACSIN1Q9BY11 AC013404.1-201ENST00000413068 249 ntBASIC5.65□□□□□ -1.5
PACSIN1Q9BY11 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC5.65□□□□□ -1.5
PACSIN1Q9BY11 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC5.65□□□□□ -1.5
PACSIN1Q9BY11 HMGN2P27-201ENST00000427352 270 ntBASIC5.65□□□□□ -1.5
PACSIN1Q9BY11 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC5.65□□□□□ -1.5
PACSIN1Q9BY11 YWHAEP5-201ENST00000431545 765 ntBASIC5.65□□□□□ -1.5
PACSIN1Q9BY11 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC5.65□□□□□ -1.5
PACSIN1Q9BY11 MTCO1P52-201ENST00000433928 531 ntBASIC5.65□□□□□ -1.5
PACSIN1Q9BY11 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
PACSIN1Q9BY11 AL008629.1-201ENST00000438615 184 ntBASIC5.65□□□□□ -1.5
PACSIN1Q9BY11 AC092170.1-201ENST00000440211 356 ntBASIC5.65□□□□□ -1.5
PACSIN1Q9BY11 AL390119.1-201ENST00000440329 312 ntBASIC5.65□□□□□ -1.5
PACSIN1Q9BY11 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.65□□□□□ -1.5
PACSIN1Q9BY11 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
PACSIN1Q9BY11 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC5.65□□□□□ -1.5
PACSIN1Q9BY11 AC233982.1-201ENST00000451247 436 ntBASIC5.65□□□□□ -1.5
PACSIN1Q9BY11 AC104634.1-201ENST00000452720 462 ntBASIC5.65□□□□□ -1.5
PACSIN1Q9BY11 AC021660.1-201ENST00000465006 554 ntBASIC5.65□□□□□ -1.5
PACSIN1Q9BY11 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC5.65□□□□□ -1.5
PACSIN1Q9BY11 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC5.65□□□□□ -1.5
PACSIN1Q9BY11 AC091860.1-201ENST00000505723 432 ntBASIC5.65□□□□□ -1.5
PACSIN1Q9BY11 HMGB1P44-201ENST00000508597 572 ntBASIC5.65□□□□□ -1.5
PACSIN1Q9BY11 AC008565.1-201ENST00000509046 885 ntBASIC5.65□□□□□ -1.5
PACSIN1Q9BY11 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC5.65□□□□□ -1.5
PACSIN1Q9BY11 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC5.65□□□□□ -1.5
PACSIN1Q9BY11 NRBF2P4-201ENST00000520874 850 ntBASIC5.65□□□□□ -1.5
PACSIN1Q9BY11 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC5.65□□□□□ -1.5
PACSIN1Q9BY11 MTCO3P15-201ENST00000526563 574 ntBASIC5.65□□□□□ -1.5
PACSIN1Q9BY11 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.65□□□□□ -1.5
PACSIN1Q9BY11 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC5.65□□□□□ -1.5
PACSIN1Q9BY11 AC090695.1-201ENST00000561269 1222 ntBASIC5.65□□□□□ -1.5
PACSIN1Q9BY11 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC5.65□□□□□ -1.5
PACSIN1Q9BY11 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC5.65□□□□□ -1.5
PACSIN1Q9BY11 CYP2C60P-201ENST00000566088 139 ntBASIC5.65□□□□□ -1.5
PACSIN1Q9BY11 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC5.65□□□□□ -1.5
PACSIN1Q9BY11 AC109446.2-201ENST00000567872 497 ntBASIC5.65□□□□□ -1.5
PACSIN1Q9BY11 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC5.65□□□□□ -1.5
PACSIN1Q9BY11 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC5.65□□□□□ -1.5
PACSIN1Q9BY11 MIR4271-201ENST00000582451 67 ntBASIC5.65□□□□□ -1.5
PACSIN1Q9BY11 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC5.65□□□□□ -1.5
PACSIN1Q9BY11 AP001269.3-201ENST00000588718 329 ntBASIC5.65□□□□□ -1.5
PACSIN1Q9BY11 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC5.65□□□□□ -1.5
PACSIN1Q9BY11 AP000255.1-201ENST00000610276 676 ntBASIC5.65□□□□□ -1.5
PACSIN1Q9BY11 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
PACSIN1Q9BY11 AL158163.2-201ENST00000619110 700 ntBASIC5.65□□□□□ -1.5
PACSIN1Q9BY11 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
PACSIN1Q9BY11 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
PACSIN1Q9BY11 AP000676.3-201ENST00000623299 569 ntBASIC5.65□□□□□ -1.5
PACSIN1Q9BY11 LGI1-209ENST00000627699 664 ntTSL 3 BASIC5.65□□□□□ -1.5
PACSIN1Q9BY11 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
PACSIN1Q9BY11 AC073055.1-201ENST00000456901 1621 ntBASIC5.65□□□□□ -1.51
PACSIN1Q9BY11 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.51
PACSIN1Q9BY11 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.51
PACSIN1Q9BY11 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC5.65□□□□□ -1.51
PACSIN1Q9BY11 AC114947.2-201ENST00000565748 2125 ntBASIC5.65□□□□□ -1.51
PACSIN1Q9BY11 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC5.65□□□□□ -1.51
PACSIN1Q9BY11 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.65□□□□□ -1.51
PACSIN1Q9BY11 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
PACSIN1Q9BY11 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC5.64□□□□□ -1.51
PACSIN1Q9BY11 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
PACSIN1Q9BY11 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
PACSIN1Q9BY11 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
PACSIN1Q9BY11 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC5.64□□□□□ -1.51
PACSIN1Q9BY11 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.64□□□□□ -1.51
PACSIN1Q9BY11 BMPR1APS1-201ENST00000403332 1598 ntBASIC5.64□□□□□ -1.51
PACSIN1Q9BY11 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
PACSIN1Q9BY11 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC5.64□□□□□ -1.51
PACSIN1Q9BY11 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
PACSIN1Q9BY11 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
PACSIN1Q9BY11 NAP1L4P1-201ENST00000319092 1157 ntBASIC5.64□□□□□ -1.51
PACSIN1Q9BY11 OR9K1P-201ENST00000326513 941 ntBASIC5.64□□□□□ -1.51
PACSIN1Q9BY11 SNORD113-6-201ENST00000363345 75 ntBASIC5.64□□□□□ -1.51
PACSIN1Q9BY11 RNA5SP234-201ENST00000363916 119 ntBASIC5.64□□□□□ -1.51
PACSIN1Q9BY11 RNU6-532P-201ENST00000384318 107 ntBASIC5.64□□□□□ -1.51
PACSIN1Q9BY11 OOSP1-201ENST00000398992 1270 ntBASIC5.64□□□□□ -1.51
PACSIN1Q9BY11 RPL21P67-201ENST00000402896 478 ntBASIC5.64□□□□□ -1.51
PACSIN1Q9BY11 AL590084.1-201ENST00000407885 387 ntBASIC5.64□□□□□ -1.51
PACSIN1Q9BY11 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC5.64□□□□□ -1.51
PACSIN1Q9BY11 AC090960.1-201ENST00000421072 306 ntBASIC5.64□□□□□ -1.51
PACSIN1Q9BY11 RPL34P3-201ENST00000421454 338 ntBASIC5.64□□□□□ -1.51
PACSIN1Q9BY11 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC5.64□□□□□ -1.51
PACSIN1Q9BY11 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC5.64□□□□□ -1.51
PACSIN1Q9BY11 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC5.64□□□□□ -1.51
PACSIN1Q9BY11 FGF7P5-201ENST00000441829 291 ntBASIC5.64□□□□□ -1.51
PACSIN1Q9BY11 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC5.64□□□□□ -1.51
PACSIN1Q9BY11 RSL24D1P3-201ENST00000449255 495 ntBASIC5.64□□□□□ -1.51
PACSIN1Q9BY11 GAPDHP14-201ENST00000450472 937 ntBASIC5.64□□□□□ -1.51
PACSIN1Q9BY11 CDC42P1-201ENST00000456658 548 ntBASIC5.64□□□□□ -1.51
PACSIN1Q9BY11 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC5.64□□□□□ -1.51
PACSIN1Q9BY11 NDUFA5P5-201ENST00000468361 342 ntBASIC5.64□□□□□ -1.51
PACSIN1Q9BY11 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC5.64□□□□□ -1.51
PACSIN1Q9BY11 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC5.64□□□□□ -1.51
PACSIN1Q9BY11 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC5.64□□□□□ -1.51
PACSIN1Q9BY11 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC5.64□□□□□ -1.51
PACSIN1Q9BY11 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC5.64□□□□□ -1.51
PACSIN1Q9BY11 MRPS33P3-201ENST00000513456 322 ntBASIC5.64□□□□□ -1.51
PACSIN1Q9BY11 SNORD46.2-201ENST00000516021 102 ntBASIC5.64□□□□□ -1.51
PACSIN1Q9BY11 RN7SKP99-201ENST00000517028 307 ntBASIC5.64□□□□□ -1.51
PACSIN1Q9BY11 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms