Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 AC135068.5-201ENST00000624197 983 ntBASIC4.4□□□□□ -1.71
SSX3Q99909 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC4.4□□□□□ -1.71
SSX3Q99909 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.4□□□□□ -1.71
SSX3Q99909 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC4.4□□□□□ -1.71
SSX3Q99909 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
SSX3Q99909 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
SSX3Q99909 AC114947.2-201ENST00000565748 2125 ntBASIC4.4□□□□□ -1.71
SSX3Q99909 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.4□□□□□ -1.71
SSX3Q99909 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
SSX3Q99909 ATP5A1P1-201ENST00000454088 1321 ntBASIC4.4□□□□□ -1.71
SSX3Q99909 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
SSX3Q99909 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC4.4□□□□□ -1.71
SSX3Q99909 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.71
SSX3Q99909 AL592437.2-201ENST00000421655 2434 ntBASIC4.4□□□□□ -1.71
SSX3Q99909 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.39□□□□□ -1.71
SSX3Q99909 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
SSX3Q99909 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SSX3Q99909 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.39□□□□□ -1.71
SSX3Q99909 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
SSX3Q99909 RNU1-94P-201ENST00000362627 173 ntBASIC4.39□□□□□ -1.71
SSX3Q99909 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
SSX3Q99909 RPL21P67-201ENST00000402896 478 ntBASIC4.39□□□□□ -1.71
SSX3Q99909 AL133388.1-201ENST00000404509 287 ntBASIC4.39□□□□□ -1.71
SSX3Q99909 RN7SKP278-201ENST00000410504 342 ntBASIC4.39□□□□□ -1.71
SSX3Q99909 RPSAP35-201ENST00000413753 818 ntBASIC4.39□□□□□ -1.71
SSX3Q99909 XKRYP4-201ENST00000414395 483 ntBASIC4.39□□□□□ -1.71
SSX3Q99909 GAPDHP49-201ENST00000421421 961 ntBASIC4.39□□□□□ -1.71
SSX3Q99909 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC4.39□□□□□ -1.71
SSX3Q99909 IPMKP1-201ENST00000425988 855 ntBASIC4.39□□□□□ -1.71
SSX3Q99909 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
SSX3Q99909 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC4.39□□□□□ -1.71
SSX3Q99909 AL035458.1-201ENST00000433096 585 ntBASIC4.39□□□□□ -1.71
SSX3Q99909 GSTM5P1-201ENST00000434751 660 ntBASIC4.39□□□□□ -1.71
SSX3Q99909 AC073465.2-201ENST00000440938 498 ntBASIC4.39□□□□□ -1.71
SSX3Q99909 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC4.39□□□□□ -1.71
SSX3Q99909 XKRYP5-201ENST00000449659 483 ntBASIC4.39□□□□□ -1.71
SSX3Q99909 RN7SL172P-201ENST00000460535 303 ntBASIC4.39□□□□□ -1.71
SSX3Q99909 RPL7AP28-201ENST00000464513 571 ntBASIC4.39□□□□□ -1.71
SSX3Q99909 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
SSX3Q99909 COPS8P2-201ENST00000473228 627 ntBASIC4.39□□□□□ -1.71
SSX3Q99909 RPL23AP37-201ENST00000479658 549 ntBASIC4.39□□□□□ -1.71
SSX3Q99909 UBA52P7-201ENST00000486088 380 ntBASIC4.39□□□□□ -1.71
SSX3Q99909 HMGB1P44-201ENST00000508597 572 ntBASIC4.39□□□□□ -1.71
SSX3Q99909 AC027338.1-201ENST00000514840 825 ntBASIC4.39□□□□□ -1.71
SSX3Q99909 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC4.39□□□□□ -1.71
SSX3Q99909 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC4.39□□□□□ -1.71
SSX3Q99909 AC092709.1-201ENST00000521355 1045 ntBASIC4.39□□□□□ -1.71
SSX3Q99909 HMGB1P40-201ENST00000525121 540 ntBASIC4.39□□□□□ -1.71
SSX3Q99909 OR10G5P-201ENST00000532733 358 ntBASIC4.39□□□□□ -1.71
SSX3Q99909 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC4.39□□□□□ -1.71
SSX3Q99909 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC4.39□□□□□ -1.71
SSX3Q99909 OR4U1P-201ENST00000554958 912 ntBASIC4.39□□□□□ -1.71
SSX3Q99909 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC4.39□□□□□ -1.71
SSX3Q99909 AC016180.1-201ENST00000567945 403 ntBASIC4.39□□□□□ -1.71
SSX3Q99909 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC4.39□□□□□ -1.71
SSX3Q99909 MIR4458-201ENST00000578872 75 ntBASIC4.39□□□□□ -1.71
SSX3Q99909 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SSX3Q99909 PRPF19P1-201ENST00000584766 898 ntBASIC4.39□□□□□ -1.71
SSX3Q99909 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC4.39□□□□□ -1.71
SSX3Q99909 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC4.39□□□□□ -1.71
SSX3Q99909 VN1R84P-201ENST00000593697 235 ntBASIC4.39□□□□□ -1.71
SSX3Q99909 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC4.39□□□□□ -1.71
SSX3Q99909 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SSX3Q99909 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC4.39□□□□□ -1.71
SSX3Q99909 Z73965.1-201ENST00000623412 2297 ntBASIC4.39□□□□□ -1.71
SSX3Q99909 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SSX3Q99909 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
SSX3Q99909 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC4.39□□□□□ -1.71
SSX3Q99909 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
SSX3Q99909 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC4.39□□□□□ -1.71
SSX3Q99909 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
SSX3Q99909 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
SSX3Q99909 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
SSX3Q99909 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
SSX3Q99909 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
SSX3Q99909 AC018529.3-201ENST00000624212 2254 ntBASIC4.38□□□□□ -1.71
SSX3Q99909 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC4.38□□□□□ -1.71
SSX3Q99909 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
SSX3Q99909 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
SSX3Q99909 AL590763.1-201ENST00000398297 1545 ntBASIC4.38□□□□□ -1.71
SSX3Q99909 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC4.38□□□□□ -1.71
SSX3Q99909 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC4.38□□□□□ -1.71
SSX3Q99909 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC4.38□□□□□ -1.71
SSX3Q99909 PABPC1P6-201ENST00000445594 1829 ntBASIC4.38□□□□□ -1.71
SSX3Q99909 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
SSX3Q99909 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
SSX3Q99909 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
SSX3Q99909 AC005294.1-201ENST00000355509 281 ntBASIC4.38□□□□□ -1.71
SSX3Q99909 MIR133B-201ENST00000362210 119 ntBASIC4.38□□□□□ -1.71
SSX3Q99909 AC007618.1-201ENST00000366455 732 ntBASIC4.38□□□□□ -1.71
SSX3Q99909 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
SSX3Q99909 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC4.38□□□□□ -1.71
SSX3Q99909 SNORA16A-201ENST00000384342 137 ntBASIC4.38□□□□□ -1.71
SSX3Q99909 RNU6-171P-201ENST00000384354 107 ntBASIC4.38□□□□□ -1.71
SSX3Q99909 AL121834.1-202ENST00000404494 277 ntBASIC4.38□□□□□ -1.71
SSX3Q99909 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC4.38□□□□□ -1.71
SSX3Q99909 SRSF1P1-201ENST00000424058 520 ntBASIC4.38□□□□□ -1.71
SSX3Q99909 RPL30P3-201ENST00000424262 333 ntBASIC4.38□□□□□ -1.71
SSX3Q99909 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
SSX3Q99909 FO393419.3-201ENST00000428741 282 ntBASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 214.9 ms