Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 AL390774.1-201ENST00000411924 246 ntBASIC4.85□□□□□ -1.63
VPS33AQ96AX1 HMGB3P31-201ENST00000413333 595 ntBASIC4.85□□□□□ -1.63
VPS33AQ96AX1 AC092570.3-201ENST00000420113 693 ntBASIC4.85□□□□□ -1.63
VPS33AQ96AX1 AL133325.1-201ENST00000421090 382 ntBASIC4.85□□□□□ -1.63
VPS33AQ96AX1 AC104843.2-201ENST00000427666 297 ntBASIC4.85□□□□□ -1.63
VPS33AQ96AX1 AC093422.3-201ENST00000428506 305 ntBASIC4.85□□□□□ -1.63
VPS33AQ96AX1 DYNLL1P7-201ENST00000429273 258 ntBASIC4.85□□□□□ -1.63
VPS33AQ96AX1 FGF12-202ENST00000430714 603 ntTSL 2 BASIC4.85□□□□□ -1.63
VPS33AQ96AX1 CYCSP6-201ENST00000434498 302 ntBASIC4.85□□□□□ -1.63
VPS33AQ96AX1 AL512661.1-201ENST00000434586 1253 ntBASIC4.85□□□□□ -1.63
VPS33AQ96AX1 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC4.85□□□□□ -1.63
VPS33AQ96AX1 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC4.85□□□□□ -1.63
VPS33AQ96AX1 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.85□□□□□ -1.63
VPS33AQ96AX1 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC4.85□□□□□ -1.63
VPS33AQ96AX1 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
VPS33AQ96AX1 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
VPS33AQ96AX1 AC004980.3-201ENST00000447046 365 ntBASIC4.85□□□□□ -1.63
VPS33AQ96AX1 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC4.85□□□□□ -1.63
VPS33AQ96AX1 RPS26P41-201ENST00000450370 284 ntBASIC4.85□□□□□ -1.63
VPS33AQ96AX1 YWHAEP1-201ENST00000453697 763 ntBASIC4.85□□□□□ -1.63
VPS33AQ96AX1 RPL7P45-201ENST00000455851 743 ntBASIC4.85□□□□□ -1.63
VPS33AQ96AX1 APOOP2-201ENST00000461561 539 ntBASIC4.85□□□□□ -1.63
VPS33AQ96AX1 SETP6-201ENST00000479329 568 ntBASIC4.85□□□□□ -1.63
VPS33AQ96AX1 RPL7P6-201ENST00000480903 738 ntBASIC4.85□□□□□ -1.63
VPS33AQ96AX1 UBA52P3-201ENST00000491303 382 ntBASIC4.85□□□□□ -1.63
VPS33AQ96AX1 AC073358.1-201ENST00000505671 684 ntBASIC4.85□□□□□ -1.63
VPS33AQ96AX1 RFESD-208ENST00000513950 464 ntTSL 5 BASIC4.85□□□□□ -1.63
VPS33AQ96AX1 RNA5SP249-201ENST00000516127 99 ntBASIC4.85□□□□□ -1.63
VPS33AQ96AX1 RNA5SP360-201ENST00000516555 118 ntBASIC4.85□□□□□ -1.63
VPS33AQ96AX1 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC4.85□□□□□ -1.63
VPS33AQ96AX1 RPL23AP53-201ENST00000521854 457 ntBASIC4.85□□□□□ -1.63
VPS33AQ96AX1 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC4.85□□□□□ -1.63
VPS33AQ96AX1 OR4R2P-201ENST00000530815 597 ntBASIC4.85□□□□□ -1.63
VPS33AQ96AX1 AC022882.1-201ENST00000532142 501 ntBASIC4.85□□□□□ -1.63
VPS33AQ96AX1 AC005868.1-201ENST00000536421 331 ntBASIC4.85□□□□□ -1.63
VPS33AQ96AX1 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC4.85□□□□□ -1.63
VPS33AQ96AX1 AC068446.3-201ENST00000555285 382 ntBASIC4.85□□□□□ -1.63
VPS33AQ96AX1 NDUFB4P11-201ENST00000560510 395 ntBASIC4.85□□□□□ -1.63
VPS33AQ96AX1 AC093510.2-201ENST00000562820 896 ntBASIC4.85□□□□□ -1.63
VPS33AQ96AX1 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC4.85□□□□□ -1.63
VPS33AQ96AX1 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC4.85□□□□□ -1.63
VPS33AQ96AX1 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC4.85□□□□□ -1.63
VPS33AQ96AX1 AC233280.2-201ENST00000603917 1070 ntBASIC4.85□□□□□ -1.63
VPS33AQ96AX1 SUGT1P3-202ENST00000604259 383 ntBASIC4.85□□□□□ -1.63
VPS33AQ96AX1 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC4.85□□□□□ -1.63
VPS33AQ96AX1 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC4.85□□□□□ -1.63
VPS33AQ96AX1 MIR8084-201ENST00000614105 89 ntBASIC4.85□□□□□ -1.63
VPS33AQ96AX1 MIR8080-201ENST00000622224 89 ntBASIC4.85□□□□□ -1.63
VPS33AQ96AX1 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC4.85□□□□□ -1.63
VPS33AQ96AX1 AP003072.4-201ENST00000624580 310 ntBASIC4.85□□□□□ -1.63
VPS33AQ96AX1 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC4.85□□□□□ -1.63
VPS33AQ96AX1 MIR1910-201ENST00000636955 80 ntBASIC4.85□□□□□ -1.63
VPS33AQ96AX1 AC135068.12-201ENST00000637370 931 ntBASIC4.85□□□□□ -1.63
VPS33AQ96AX1 AC074101.1-201ENST00000637861 241 ntBASIC4.85□□□□□ -1.63
VPS33AQ96AX1 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.85□□□□□ -1.63
VPS33AQ96AX1 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
VPS33AQ96AX1 ST7-212ENST00000422922 1887 ntTSL 5 BASIC4.85□□□□□ -1.63
VPS33AQ96AX1 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.85□□□□□ -1.63
VPS33AQ96AX1 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
VPS33AQ96AX1 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
VPS33AQ96AX1 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
VPS33AQ96AX1 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
VPS33AQ96AX1 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
VPS33AQ96AX1 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
VPS33AQ96AX1 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
VPS33AQ96AX1 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
VPS33AQ96AX1 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
VPS33AQ96AX1 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC4.84□□□□□ -1.63
VPS33AQ96AX1 AL672167.1-205ENST00000641112 3080 ntBASIC4.84□□□□□ -1.63
VPS33AQ96AX1 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
VPS33AQ96AX1 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
VPS33AQ96AX1 USP9YP4-201ENST00000424401 1745 ntBASIC4.84□□□□□ -1.63
VPS33AQ96AX1 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
VPS33AQ96AX1 SSXP3-201ENST00000442971 1300 ntBASIC4.84□□□□□ -1.63
VPS33AQ96AX1 MFSD8-213ENST00000641134 1327 ntBASIC4.84□□□□□ -1.63
VPS33AQ96AX1 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
VPS33AQ96AX1 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
VPS33AQ96AX1 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC4.84□□□□□ -1.63
VPS33AQ96AX1 MIR16-2-201ENST00000362117 81 ntBASIC4.84□□□□□ -1.63
VPS33AQ96AX1 MRRF-207ENST00000373729 870 ntTSL 3 BASIC4.84□□□□□ -1.63
VPS33AQ96AX1 RNU6-1005P-201ENST00000384519 107 ntBASIC4.84□□□□□ -1.63
VPS33AQ96AX1 RNU6ATAC18P-201ENST00000408413 101 ntBASIC4.84□□□□□ -1.63
VPS33AQ96AX1 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC4.84□□□□□ -1.63
VPS33AQ96AX1 RN7SKP125-201ENST00000410481 302 ntBASIC4.84□□□□□ -1.63
VPS33AQ96AX1 SDHDP6-201ENST00000414693 480 ntBASIC4.84□□□□□ -1.63
VPS33AQ96AX1 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC4.84□□□□□ -1.63
VPS33AQ96AX1 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC4.84□□□□□ -1.63
VPS33AQ96AX1 RPL24P2-201ENST00000421023 475 ntBASIC4.84□□□□□ -1.63
VPS33AQ96AX1 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC4.84□□□□□ -1.63
VPS33AQ96AX1 AC073310.1-201ENST00000423226 1033 ntBASIC4.84□□□□□ -1.63
VPS33AQ96AX1 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC4.84□□□□□ -1.63
VPS33AQ96AX1 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
VPS33AQ96AX1 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC4.84□□□□□ -1.63
VPS33AQ96AX1 CYCSP12-201ENST00000437729 300 ntBASIC4.84□□□□□ -1.63
VPS33AQ96AX1 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC4.84□□□□□ -1.63
VPS33AQ96AX1 ACTR3P2-201ENST00000439585 1257 ntBASIC4.84□□□□□ -1.63
VPS33AQ96AX1 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC4.84□□□□□ -1.63
VPS33AQ96AX1 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC4.84□□□□□ -1.63
VPS33AQ96AX1 GEMIN8P3-201ENST00000445417 720 ntBASIC4.84□□□□□ -1.63
VPS33AQ96AX1 RPL6P5-201ENST00000445678 828 ntBASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms