Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 AL133216.2-202ENST00000634512 349 ntBASIC7.41□□□□□ -1.22
HLA-CQ95604 AC126773.4-201ENST00000612545 3043 ntBASIC7.41□□□□□ -1.22
HLA-CQ95604 MAPK10-242ENST00000639242 3088 ntAPPRIS P2 TSL 5 BASIC7.41□□□□□ -1.22
HLA-CQ95604 TMEM169-201ENST00000295658 3342 ntAPPRIS P1 TSL 2 BASIC7.41□□□□□ -1.22
HLA-CQ95604 AC245177.1-201ENST00000375625 2369 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
HLA-CQ95604 AC239585.1-201ENST00000375644 2369 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
HLA-CQ95604 ITPR1-202ENST00000354582 10242 ntTSL 5 BASIC7.41□□□□□ -1.22
HLA-CQ95604 LIMK2-201ENST00000331728 3670 ntAPPRIS P4 TSL 1 (best) BASIC7.41□□□□□ -1.22
HLA-CQ95604 TRPM3-208ENST00000377105 5957 ntAPPRIS ALT2 TSL 5 BASIC7.41□□□□□ -1.22
HLA-CQ95604 AL136981.1-203ENST00000451452 3844 ntBASIC7.41□□□□□ -1.22
HLA-CQ95604 TENM4-201ENST00000278550 14000 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
HLA-CQ95604 CCDC73-203ENST00000531481 4381 ntAPPRIS ALT2 TSL 2 BASIC7.41□□□□□ -1.22
HLA-CQ95604 TMCC1P1-201ENST00000518897 1980 ntBASIC7.4□□□□□ -1.22
HLA-CQ95604 FAM13C-215ENST00000614220 3388 ntAPPRIS ALT2 TSL 5 BASIC7.4□□□□□ -1.22
HLA-CQ95604 AGXT2-206ENST00000618015 2181 ntTSL 5 BASIC7.4□□□□□ -1.22
HLA-CQ95604 DNAJC18-201ENST00000302060 5103 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
HLA-CQ95604 FRYL-210ENST00000507711 5277 ntTSL 2 BASIC7.4□□□□□ -1.22
HLA-CQ95604 SPRY1-201ENST00000339241 2348 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
HLA-CQ95604 NLRP3-206ENST00000391828 3853 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
HLA-CQ95604 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
HLA-CQ95604 ZFP42-203ENST00000618147 2338 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
HLA-CQ95604 AC010894.3-201ENST00000442996 2400 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
HLA-CQ95604 TMED8-201ENST00000216468 7784 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
HLA-CQ95604 FARP1-219ENST00000596580 13532 ntTSL 5 BASIC7.4□□□□□ -1.22
HLA-CQ95604 ABCB1-210ENST00000543898 4524 ntTSL 5 BASIC7.4□□□□□ -1.22
HLA-CQ95604 CACNA1D-211ENST00000636570 6441 ntAPPRIS ALT2 TSL 5 BASIC7.4□□□□□ -1.22
HLA-CQ95604 CHN2-208ENST00000412711 2991 ntTSL 2 BASIC7.4□□□□□ -1.22
HLA-CQ95604 CFAP54-202ENST00000524981 9766 ntAPPRIS P2 TSL 5 BASIC7.4□□□□□ -1.22
HLA-CQ95604 LIPG-201ENST00000261292 10441 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
HLA-CQ95604 BANF2-201ENST00000246090 595 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
HLA-CQ95604 HIST1H2BA-201ENST00000274764 516 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
HLA-CQ95604 Y_RNA.31-201ENST00000362574 102 ntBASIC7.4□□□□□ -1.22
HLA-CQ95604 PARD3-204ENST00000374768 799 ntTSL 3 BASIC7.4□□□□□ -1.22
HLA-CQ95604 SNORA70G-201ENST00000383923 142 ntBASIC7.4□□□□□ -1.22
HLA-CQ95604 RNU6-505P-201ENST00000384427 107 ntBASIC7.4□□□□□ -1.22
HLA-CQ95604 AL590762.1-201ENST00000391782 432 ntBASIC7.4□□□□□ -1.22
HLA-CQ95604 AL591416.1-201ENST00000404015 867 ntBASIC7.4□□□□□ -1.22
HLA-CQ95604 RN7SKP222-201ENST00000410651 315 ntBASIC7.4□□□□□ -1.22
HLA-CQ95604 RNU2-6P-201ENST00000411404 190 ntBASIC7.4□□□□□ -1.22
HLA-CQ95604 METTL15P3-201ENST00000415522 1221 ntBASIC7.4□□□□□ -1.22
HLA-CQ95604 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC7.4□□□□□ -1.22
HLA-CQ95604 MTCYBP10-201ENST00000424905 650 ntBASIC7.4□□□□□ -1.22
HLA-CQ95604 AC137499.1-201ENST00000427602 88 ntBASIC7.4□□□□□ -1.22
HLA-CQ95604 AC018804.1-201ENST00000430381 618 ntBASIC7.4□□□□□ -1.22
HLA-CQ95604 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC7.4□□□□□ -1.22
HLA-CQ95604 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC7.4□□□□□ -1.22
HLA-CQ95604 HMGB3P10-201ENST00000434734 572 ntBASIC7.4□□□□□ -1.22
HLA-CQ95604 AL645939.3-201ENST00000435408 225 ntBASIC7.4□□□□□ -1.22
HLA-CQ95604 RPS3AP52-201ENST00000435639 297 ntBASIC7.4□□□□□ -1.22
HLA-CQ95604 AMYP1-201ENST00000440059 1023 ntBASIC7.4□□□□□ -1.22
HLA-CQ95604 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC7.4□□□□□ -1.22
HLA-CQ95604 MORF4-201ENST00000447135 971 ntBASIC7.4□□□□□ -1.22
HLA-CQ95604 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC7.4□□□□□ -1.22
HLA-CQ95604 AL162427.1-201ENST00000450399 439 ntTSL 5 BASIC7.4□□□□□ -1.22
HLA-CQ95604 HMGB1P7-201ENST00000450921 612 ntBASIC7.4□□□□□ -1.22
HLA-CQ95604 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
HLA-CQ95604 MTND3P16-201ENST00000452205 344 ntBASIC7.4□□□□□ -1.22
HLA-CQ95604 Z83838.1-202ENST00000456225 839 ntBASIC7.4□□□□□ -1.22
HLA-CQ95604 AC093627.1-201ENST00000465755 877 ntTSL 3 BASIC7.4□□□□□ -1.22
HLA-CQ95604 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC7.4□□□□□ -1.22
HLA-CQ95604 HMGN1P16-201ENST00000508308 283 ntBASIC7.4□□□□□ -1.22
HLA-CQ95604 OR4D12P-201ENST00000509361 911 ntBASIC7.4□□□□□ -1.22
HLA-CQ95604 RNU4ATAC8P-201ENST00000516196 109 ntBASIC7.4□□□□□ -1.22
HLA-CQ95604 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC7.4□□□□□ -1.22
HLA-CQ95604 COPS8P3-201ENST00000526024 482 ntBASIC7.4□□□□□ -1.22
HLA-CQ95604 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC7.4□□□□□ -1.22
HLA-CQ95604 AP000435.1-201ENST00000528539 496 ntBASIC7.4□□□□□ -1.22
HLA-CQ95604 AL161670.1-201ENST00000554348 137 ntBASIC7.4□□□□□ -1.22
HLA-CQ95604 AC090607.2-201ENST00000560331 695 ntBASIC7.4□□□□□ -1.22
HLA-CQ95604 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC7.4□□□□□ -1.22
HLA-CQ95604 AC063977.7-201ENST00000594454 337 ntBASIC7.4□□□□□ -1.22
HLA-CQ95604 SNX29P2-204ENST00000603801 875 ntBASIC7.4□□□□□ -1.22
HLA-CQ95604 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC7.4□□□□□ -1.22
HLA-CQ95604 OAZ3-211ENST00000639906 708 ntAPPRIS P2 TSL 5 BASIC7.4□□□□□ -1.22
HLA-CQ95604 SYTL4-204ENST00000372989 3885 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
HLA-CQ95604 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC7.4□□□□□ -1.22
HLA-CQ95604 CYP4Z2P-202ENST00000505841 1436 ntTSL 2 BASIC7.4□□□□□ -1.22
HLA-CQ95604 SHPRH-203ENST00000367505 7201 ntAPPRIS P2 TSL 5 BASIC7.4□□□□□ -1.22
HLA-CQ95604 ACO1-201ENST00000309951 7466 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
HLA-CQ95604 ZNF827-203ENST00000508784 7463 ntAPPRIS ALT2 TSL 1 (best) BASIC7.4□□□□□ -1.22
HLA-CQ95604 IKZF5-201ENST00000368886 4555 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
HLA-CQ95604 WDR95P-201ENST00000425638 1542 ntBASIC7.4□□□□□ -1.22
HLA-CQ95604 LINC01653-201ENST00000456026 1728 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
HLA-CQ95604 RRN3-202ENST00000327307 2039 ntTSL 2 BASIC7.4□□□□□ -1.23
HLA-CQ95604 DIO2-210ENST00000557010 6367 ntAPPRIS P1 TSL 2 BASIC7.4□□□□□ -1.23
HLA-CQ95604 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC7.4□□□□□ -1.23
HLA-CQ95604 RXFP1-207ENST00000470033 2175 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
HLA-CQ95604 SEC62-201ENST00000337002 6568 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
HLA-CQ95604 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
HLA-CQ95604 KCNIP4-202ENST00000382148 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC7.4□□□□□ -1.23
HLA-CQ95604 TRIM6-203ENST00000380107 2590 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
HLA-CQ95604 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC7.4□□□□□ -1.23
HLA-CQ95604 PROX1-203ENST00000435016 3075 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
HLA-CQ95604 IQCA1-204ENST00000409907 3281 ntAPPRIS P3 TSL 1 (best) BASIC7.4□□□□□ -1.23
HLA-CQ95604 AC091544.5-201ENST00000620192 3815 ntBASIC7.4□□□□□ -1.23
HLA-CQ95604 SEC31A-207ENST00000443462 4042 ntTSL 2 BASIC7.4□□□□□ -1.23
HLA-CQ95604 DDX24-209ENST00000621632 5612 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
HLA-CQ95604 KLHL8-203ENST00000498875 5175 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
HLA-CQ95604 GIMAP8-201ENST00000307271 4184 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
HLA-CQ95604 WBP1L-201ENST00000369889 4107 ntAPPRIS P3 TSL 1 (best) BASIC7.39□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms