Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 RSL24D1P1-201ENST00000404972 493 ntBASIC4.95□□□□□ -1.62
SLC44A1Q8WWI5 SNORA11B-201ENST00000408175 129 ntBASIC4.95□□□□□ -1.62
SLC44A1Q8WWI5 STAT4-203ENST00000409995 709 ntTSL 5 BASIC4.95□□□□□ -1.62
SLC44A1Q8WWI5 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC4.95□□□□□ -1.62
SLC44A1Q8WWI5 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC4.95□□□□□ -1.62
SLC44A1Q8WWI5 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC4.95□□□□□ -1.62
SLC44A1Q8WWI5 AC006065.1-201ENST00000422539 802 ntBASIC4.95□□□□□ -1.62
SLC44A1Q8WWI5 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC4.95□□□□□ -1.62
SLC44A1Q8WWI5 TMX2P1-201ENST00000436507 708 ntBASIC4.95□□□□□ -1.62
SLC44A1Q8WWI5 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.95□□□□□ -1.62
SLC44A1Q8WWI5 AC107015.1-201ENST00000466902 747 ntBASIC4.95□□□□□ -1.62
SLC44A1Q8WWI5 OR2AO1P-201ENST00000476497 403 ntBASIC4.95□□□□□ -1.62
SLC44A1Q8WWI5 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
SLC44A1Q8WWI5 Y_RNA.719-201ENST00000517156 106 ntBASIC4.95□□□□□ -1.62
SLC44A1Q8WWI5 MTCYBP19-201ENST00000517463 1124 ntBASIC4.95□□□□□ -1.62
SLC44A1Q8WWI5 AP003355.1-201ENST00000518956 587 ntBASIC4.95□□□□□ -1.62
SLC44A1Q8WWI5 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC4.95□□□□□ -1.62
SLC44A1Q8WWI5 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC4.95□□□□□ -1.62
SLC44A1Q8WWI5 OR1AB1P-201ENST00000585564 761 ntBASIC4.95□□□□□ -1.62
SLC44A1Q8WWI5 SNX6P1-201ENST00000601728 1224 ntBASIC4.95□□□□□ -1.62
SLC44A1Q8WWI5 AC095055.1-201ENST00000603472 1113 ntBASIC4.95□□□□□ -1.62
SLC44A1Q8WWI5 AC105254.2-201ENST00000603636 436 ntBASIC4.95□□□□□ -1.62
SLC44A1Q8WWI5 AC017076.1-201ENST00000607613 578 ntBASIC4.95□□□□□ -1.62
SLC44A1Q8WWI5 AL135786.2-201ENST00000608422 615 ntBASIC4.95□□□□□ -1.62
SLC44A1Q8WWI5 SNORD91B-202ENST00000608459 222 ntBASIC4.95□□□□□ -1.62
SLC44A1Q8WWI5 AP001005.3-201ENST00000622049 129 ntBASIC4.95□□□□□ -1.62
SLC44A1Q8WWI5 MIR6719-201ENST00000622428 87 ntBASIC4.95□□□□□ -1.62
SLC44A1Q8WWI5 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
SLC44A1Q8WWI5 CASC19-264ENST00000641912 1184 ntBASIC4.95□□□□□ -1.62
SLC44A1Q8WWI5 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
SLC44A1Q8WWI5 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
SLC44A1Q8WWI5 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
SLC44A1Q8WWI5 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC4.95□□□□□ -1.62
SLC44A1Q8WWI5 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
SLC44A1Q8WWI5 AL359922.3-201ENST00000624779 1670 ntBASIC4.95□□□□□ -1.62
SLC44A1Q8WWI5 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC4.95□□□□□ -1.62
SLC44A1Q8WWI5 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
SLC44A1Q8WWI5 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
SLC44A1Q8WWI5 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
SLC44A1Q8WWI5 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
SLC44A1Q8WWI5 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC4.94□□□□□ -1.62
SLC44A1Q8WWI5 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
SLC44A1Q8WWI5 MIR16-2-201ENST00000362117 81 ntBASIC4.94□□□□□ -1.62
SLC44A1Q8WWI5 SNORA17.1-201ENST00000362945 126 ntBASIC4.94□□□□□ -1.62
SLC44A1Q8WWI5 RNU6-252P-201ENST00000363232 107 ntBASIC4.94□□□□□ -1.62
SLC44A1Q8WWI5 RNU1-83P-201ENST00000363426 164 ntBASIC4.94□□□□□ -1.62
SLC44A1Q8WWI5 RNU6-729P-201ENST00000384399 107 ntBASIC4.94□□□□□ -1.62
SLC44A1Q8WWI5 MIR1286-201ENST00000408112 78 ntBASIC4.94□□□□□ -1.62
SLC44A1Q8WWI5 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
SLC44A1Q8WWI5 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC4.94□□□□□ -1.62
SLC44A1Q8WWI5 VN1R37P-201ENST00000419096 748 ntBASIC4.94□□□□□ -1.62
SLC44A1Q8WWI5 VN1R42P-201ENST00000424651 344 ntBASIC4.94□□□□□ -1.62
SLC44A1Q8WWI5 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC4.94□□□□□ -1.62
SLC44A1Q8WWI5 LYPLA1P1-201ENST00000434514 622 ntBASIC4.94□□□□□ -1.62
SLC44A1Q8WWI5 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC4.94□□□□□ -1.62
SLC44A1Q8WWI5 PA2G4P6-201ENST00000438325 1197 ntBASIC4.94□□□□□ -1.62
SLC44A1Q8WWI5 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
SLC44A1Q8WWI5 MYO5BP2-201ENST00000449815 1277 ntBASIC4.94□□□□□ -1.62
SLC44A1Q8WWI5 COPS8P2-201ENST00000473228 627 ntBASIC4.94□□□□□ -1.62
SLC44A1Q8WWI5 RPL21P6-201ENST00000479171 504 ntBASIC4.94□□□□□ -1.62
SLC44A1Q8WWI5 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC4.94□□□□□ -1.62
SLC44A1Q8WWI5 PGAM1P13-201ENST00000507497 754 ntBASIC4.94□□□□□ -1.62
SLC44A1Q8WWI5 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC4.94□□□□□ -1.62
SLC44A1Q8WWI5 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC4.94□□□□□ -1.62
SLC44A1Q8WWI5 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC4.94□□□□□ -1.62
SLC44A1Q8WWI5 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.94□□□□□ -1.62
SLC44A1Q8WWI5 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.94□□□□□ -1.62
SLC44A1Q8WWI5 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC4.94□□□□□ -1.62
SLC44A1Q8WWI5 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC4.94□□□□□ -1.62
SLC44A1Q8WWI5 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC4.94□□□□□ -1.62
SLC44A1Q8WWI5 AC051619.2-201ENST00000559063 397 ntBASIC4.94□□□□□ -1.62
SLC44A1Q8WWI5 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC4.94□□□□□ -1.62
SLC44A1Q8WWI5 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC4.94□□□□□ -1.62
SLC44A1Q8WWI5 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.94□□□□□ -1.62
SLC44A1Q8WWI5 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC4.94□□□□□ -1.62
SLC44A1Q8WWI5 OR7E18P-201ENST00000592589 702 ntBASIC4.94□□□□□ -1.62
SLC44A1Q8WWI5 AC245884.10-201ENST00000597355 337 ntBASIC4.94□□□□□ -1.62
SLC44A1Q8WWI5 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC4.94□□□□□ -1.62
SLC44A1Q8WWI5 BX323046.1-201ENST00000610145 535 ntBASIC4.94□□□□□ -1.62
SLC44A1Q8WWI5 AC022960.3-201ENST00000619794 441 ntBASIC4.94□□□□□ -1.62
SLC44A1Q8WWI5 WWOX-217ENST00000620008 450 ntTSL 2 BASIC4.94□□□□□ -1.62
SLC44A1Q8WWI5 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
SLC44A1Q8WWI5 AC093875.1-201ENST00000623688 504 ntBASIC4.94□□□□□ -1.62
SLC44A1Q8WWI5 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC4.94□□□□□ -1.62
SLC44A1Q8WWI5 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.94□□□□□ -1.62
SLC44A1Q8WWI5 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
SLC44A1Q8WWI5 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
SLC44A1Q8WWI5 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4.94□□□□□ -1.62
SLC44A1Q8WWI5 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC4.94□□□□□ -1.62
SLC44A1Q8WWI5 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
SLC44A1Q8WWI5 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
SLC44A1Q8WWI5 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.94□□□□□ -1.62
SLC44A1Q8WWI5 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
SLC44A1Q8WWI5 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
SLC44A1Q8WWI5 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC4.94□□□□□ -1.62
SLC44A1Q8WWI5 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
SLC44A1Q8WWI5 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
SLC44A1Q8WWI5 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SLC44A1Q8WWI5 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SLC44A1Q8WWI5 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.93□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 72.9 ms