Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 AC015722.2-201ENST00000622210 551 ntBASIC1.41□□□□□ -2.18
SYNE1Q8NF91 AC011815.3-201ENST00000624194 473 ntBASIC1.41□□□□□ -2.18
SYNE1Q8NF91 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC1.41□□□□□ -2.18
SYNE1Q8NF91 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
SYNE1Q8NF91 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
SYNE1Q8NF91 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
SYNE1Q8NF91 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC1.41□□□□□ -2.18
SYNE1Q8NF91 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC1.41□□□□□ -2.18
SYNE1Q8NF91 NRK-204ENST00000540278 1687 ntTSL 2 BASIC1.41□□□□□ -2.18
SYNE1Q8NF91 AL603750.1-201ENST00000624216 1717 ntBASIC1.41□□□□□ -2.18
SYNE1Q8NF91 AC100778.3-201ENST00000580060 1750 ntBASIC1.41□□□□□ -2.18
SYNE1Q8NF91 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
SYNE1Q8NF91 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC1.41□□□□□ -2.18
SYNE1Q8NF91 NAMPTP1-201ENST00000440465 2514 ntBASIC1.41□□□□□ -2.18
SYNE1Q8NF91 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC1.41□□□□□ -2.18
SYNE1Q8NF91 AL137845.2-201ENST00000444292 988 ntBASIC1.41□□□□□ -2.18
SYNE1Q8NF91 RPL23AP43-201ENST00000446445 471 ntBASIC1.41□□□□□ -2.18
SYNE1Q8NF91 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
SYNE1Q8NF91 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
SYNE1Q8NF91 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC1.41□□□□□ -2.18
SYNE1Q8NF91 AC020634.1-201ENST00000608701 549 ntBASIC1.41□□□□□ -2.18
SYNE1Q8NF91 MIR6853-201ENST00000619642 74 ntBASIC1.41□□□□□ -2.18
SYNE1Q8NF91 RNA5SP196-201ENST00000625967 102 ntBASIC1.41□□□□□ -2.18
SYNE1Q8NF91 OR8B1P-202ENST00000641132 1178 ntBASIC1.41□□□□□ -2.18
SYNE1Q8NF91 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
SYNE1Q8NF91 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC1.41□□□□□ -2.18
SYNE1Q8NF91 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC1.41□□□□□ -2.18
SYNE1Q8NF91 RNU1-13P-201ENST00000384499 162 ntBASIC1.41□□□□□ -2.18
SYNE1Q8NF91 U3.32-201ENST00000408116 212 ntBASIC1.41□□□□□ -2.18
SYNE1Q8NF91 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
SYNE1Q8NF91 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC1.41□□□□□ -2.18
SYNE1Q8NF91 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC1.41□□□□□ -2.18
SYNE1Q8NF91 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC1.41□□□□□ -2.18
SYNE1Q8NF91 AC010266.2-201ENST00000564741 3255 ntBASIC1.41□□□□□ -2.18
SYNE1Q8NF91 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC1.41□□□□□ -2.18
SYNE1Q8NF91 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
SYNE1Q8NF91 AL034374.2-201ENST00000605281 548 ntBASIC1.41□□□□□ -2.18
SYNE1Q8NF91 AL450472.3-201ENST00000615578 367 ntBASIC1.41□□□□□ -2.18
SYNE1Q8NF91 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC1.41□□□□□ -2.18
SYNE1Q8NF91 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC1.41□□□□□ -2.18
SYNE1Q8NF91 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC1.41□□□□□ -2.18
SYNE1Q8NF91 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC1.41□□□□□ -2.18
SYNE1Q8NF91 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
SYNE1Q8NF91 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
SYNE1Q8NF91 AL731566.1-201ENST00000620490 1937 ntBASIC1.41□□□□□ -2.18
SYNE1Q8NF91 AC002525.1-201ENST00000624392 1622 ntBASIC1.41□□□□□ -2.18
SYNE1Q8NF91 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC1.41□□□□□ -2.18
SYNE1Q8NF91 TRIM51GP-201ENST00000534741 1350 ntBASIC1.41□□□□□ -2.18
SYNE1Q8NF91 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC1.41□□□□□ -2.18
SYNE1Q8NF91 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC1.41□□□□□ -2.18
SYNE1Q8NF91 MIR372-201ENST00000362225 67 ntBASIC1.41□□□□□ -2.18
SYNE1Q8NF91 PHBP16-201ENST00000446318 950 ntBASIC1.41□□□□□ -2.18
SYNE1Q8NF91 TAAR4P-201ENST00000454843 1039 ntBASIC1.41□□□□□ -2.18
SYNE1Q8NF91 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC1.41□□□□□ -2.18
SYNE1Q8NF91 AC006499.6-201ENST00000511169 607 ntBASIC1.41□□□□□ -2.18
SYNE1Q8NF91 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC1.41□□□□□ -2.18
SYNE1Q8NF91 MED28P5-201ENST00000528254 438 ntBASIC1.41□□□□□ -2.18
SYNE1Q8NF91 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC1.41□□□□□ -2.18
SYNE1Q8NF91 AC009643.1-201ENST00000532030 391 ntBASIC1.41□□□□□ -2.18
SYNE1Q8NF91 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC1.41□□□□□ -2.18
SYNE1Q8NF91 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC1.41□□□□□ -2.18
SYNE1Q8NF91 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
SYNE1Q8NF91 ZNF181-204ENST00000492450 5086 ntAPPRIS P3 TSL 1 (best) BASIC1.41□□□□□ -2.18
SYNE1Q8NF91 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC1.41□□□□□ -2.18
SYNE1Q8NF91 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
SYNE1Q8NF91 OR56B2P-202ENST00000641377 2453 ntBASIC1.41□□□□□ -2.18
SYNE1Q8NF91 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC1.41□□□□□ -2.18
SYNE1Q8NF91 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
SYNE1Q8NF91 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC1.41□□□□□ -2.18
SYNE1Q8NF91 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
SYNE1Q8NF91 AC008549.2-201ENST00000333482 706 ntBASIC1.41□□□□□ -2.18
SYNE1Q8NF91 U3.28-201ENST00000391249 210 ntBASIC1.41□□□□□ -2.18
SYNE1Q8NF91 AC097374.1-203ENST00000400783 485 ntBASIC1.41□□□□□ -2.18
SYNE1Q8NF91 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC1.41□□□□□ -2.18
SYNE1Q8NF91 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC1.41□□□□□ -2.18
SYNE1Q8NF91 AC068196.1-201ENST00000456895 833 ntTSL 3 BASIC1.41□□□□□ -2.18
SYNE1Q8NF91 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC1.41□□□□□ -2.18
SYNE1Q8NF91 SNX18P1Y-201ENST00000616231 511 ntBASIC1.41□□□□□ -2.18
SYNE1Q8NF91 MIR6075-201ENST00000620782 95 ntBASIC1.41□□□□□ -2.18
SYNE1Q8NF91 uc_338.7-201ENST00000621834 124 ntBASIC1.41□□□□□ -2.18
SYNE1Q8NF91 LYST-202ENST00000389794 12985 ntTSL 5 BASIC1.4□□□□□ -2.18
SYNE1Q8NF91 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC1.4□□□□□ -2.18
SYNE1Q8NF91 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC1.4□□□□□ -2.18
SYNE1Q8NF91 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC1.4□□□□□ -2.18
SYNE1Q8NF91 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC1.4□□□□□ -2.18
SYNE1Q8NF91 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC1.4□□□□□ -2.18
SYNE1Q8NF91 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC1.4□□□□□ -2.18
SYNE1Q8NF91 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC1.4□□□□□ -2.18
SYNE1Q8NF91 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.18
SYNE1Q8NF91 AL021331.1-201ENST00000402817 582 ntBASIC1.4□□□□□ -2.18
SYNE1Q8NF91 AC233289.1-201ENST00000403700 508 ntBASIC1.4□□□□□ -2.18
SYNE1Q8NF91 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC1.4□□□□□ -2.18
SYNE1Q8NF91 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC1.4□□□□□ -2.18
SYNE1Q8NF91 AC006133.1-201ENST00000617106 264 ntBASIC1.4□□□□□ -2.18
SYNE1Q8NF91 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC1.4□□□□□ -2.18
SYNE1Q8NF91 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC1.4□□□□□ -2.18
SYNE1Q8NF91 MAPK10-320ENST00000641462 6696 ntBASIC1.4□□□□□ -2.18
SYNE1Q8NF91 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC1.4□□□□□ -2.18
SYNE1Q8NF91 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC1.4□□□□□ -2.18
SYNE1Q8NF91 AL627171.1-201ENST00000618845 1308 ntBASIC1.4□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 90.8 ms