Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC7.98□□□□□ -1.13
RC3H1Q5TC82 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC7.98□□□□□ -1.13
RC3H1Q5TC82 ACTG1P13-201ENST00000486987 1043 ntBASIC7.98□□□□□ -1.13
RC3H1Q5TC82 AC008638.1-201ENST00000506035 866 ntBASIC7.98□□□□□ -1.13
RC3H1Q5TC82 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC7.98□□□□□ -1.13
RC3H1Q5TC82 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC7.98□□□□□ -1.13
RC3H1Q5TC82 HSPA8P13-201ENST00000523715 472 ntBASIC7.98□□□□□ -1.13
RC3H1Q5TC82 AC022182.1-202ENST00000529234 580 ntTSL 2 BASIC7.98□□□□□ -1.13
RC3H1Q5TC82 OLR1-210ENST00000544577 924 ntTSL 5 BASIC7.98□□□□□ -1.13
RC3H1Q5TC82 AL512360.1-201ENST00000555346 234 ntBASIC7.98□□□□□ -1.13
RC3H1Q5TC82 AC051619.2-201ENST00000559063 397 ntBASIC7.98□□□□□ -1.13
RC3H1Q5TC82 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC7.98□□□□□ -1.13
RC3H1Q5TC82 MTCYBP13-201ENST00000578634 1093 ntBASIC7.98□□□□□ -1.13
RC3H1Q5TC82 SNORD95-201ENST00000579879 68 ntBASIC7.98□□□□□ -1.13
RC3H1Q5TC82 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC7.98□□□□□ -1.13
RC3H1Q5TC82 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC7.98□□□□□ -1.13
RC3H1Q5TC82 AL513218.1-201ENST00000606527 391 ntBASIC7.98□□□□□ -1.13
RC3H1Q5TC82 AL592494.3-201ENST00000609485 464 ntBASIC7.98□□□□□ -1.13
RC3H1Q5TC82 AL352984.2-201ENST00000611153 546 ntBASIC7.98□□□□□ -1.13
RC3H1Q5TC82 AC027807.2-201ENST00000616099 408 ntBASIC7.98□□□□□ -1.13
RC3H1Q5TC82 AL603758.1-201ENST00000618654 241 ntBASIC7.98□□□□□ -1.13
RC3H1Q5TC82 AL158801.5-201ENST00000623123 465 ntBASIC7.98□□□□□ -1.13
RC3H1Q5TC82 AL078596.1-201ENST00000624856 447 ntBASIC7.98□□□□□ -1.13
RC3H1Q5TC82 AL049767.1-202ENST00000637826 242 ntBASIC7.98□□□□□ -1.13
RC3H1Q5TC82 AC012078.1-201ENST00000405035 1646 ntBASIC7.98□□□□□ -1.13
RC3H1Q5TC82 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
RC3H1Q5TC82 RNF146-210ENST00000608991 2169 ntAPPRIS P3 TSL 4 BASIC7.98□□□□□ -1.13
RC3H1Q5TC82 UMAD1-206ENST00000636849 2157 ntAPPRIS P1 TSL 5 BASIC7.98□□□□□ -1.13
RC3H1Q5TC82 EIF2S3-201ENST00000253039 2858 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
RC3H1Q5TC82 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
RC3H1Q5TC82 HSPD1P7-201ENST00000447985 1686 ntBASIC7.98□□□□□ -1.13
RC3H1Q5TC82 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
RC3H1Q5TC82 CUL4AP1-201ENST00000514750 1863 ntBASIC7.98□□□□□ -1.13
RC3H1Q5TC82 MAGT1-201ENST00000358075 4047 ntAPPRIS P2 TSL 1 (best) BASIC7.98□□□□□ -1.13
RC3H1Q5TC82 CRB1-202ENST00000367399 3885 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
RC3H1Q5TC82 BBOX1-205ENST00000529202 1725 ntAPPRIS P1 TSL 5 BASIC7.98□□□□□ -1.13
RC3H1Q5TC82 KPNA1-201ENST00000344337 6830 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
RC3H1Q5TC82 FLJ42393-201ENST00000623801 2270 ntBASIC7.98□□□□□ -1.13
RC3H1Q5TC82 CXCR6-204ENST00000458629 2805 ntAPPRIS P1 BASIC7.97□□□□□ -1.13
RC3H1Q5TC82 JAM3-202ENST00000441717 3363 ntTSL 2 BASIC7.97□□□□□ -1.13
RC3H1Q5TC82 ZNF532-223ENST00000591230 4450 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
RC3H1Q5TC82 LCP1-201ENST00000323076 3787 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
RC3H1Q5TC82 INTS2-207ENST00000617492 5805 ntTSL 5 BASIC7.97□□□□□ -1.13
RC3H1Q5TC82 CHCHD7-203ENST00000396723 1550 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
RC3H1Q5TC82 LINC00652-201ENST00000412553 3299 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
RC3H1Q5TC82 FBXL13-201ENST00000313221 2744 ntTSL 2 BASIC7.97□□□□□ -1.13
RC3H1Q5TC82 AC104162.1-201ENST00000430831 2382 ntBASIC7.97□□□□□ -1.13
RC3H1Q5TC82 AC068733.2-201ENST00000605434 1418 ntBASIC7.97□□□□□ -1.13
RC3H1Q5TC82 PRND-201ENST00000305817 3980 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
RC3H1Q5TC82 OR6J1-201ENST00000540461 4165 ntAPPRIS P1 BASIC7.97□□□□□ -1.13
RC3H1Q5TC82 HABP2-201ENST00000351270 3009 ntAPPRIS P3 TSL 1 (best) BASIC7.97□□□□□ -1.13
RC3H1Q5TC82 MRO-201ENST00000256425 5166 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
RC3H1Q5TC82 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC7.97□□□□□ -1.13
RC3H1Q5TC82 MIR143-201ENST00000385300 106 ntBASIC7.97□□□□□ -1.13
RC3H1Q5TC82 SDHDP6-201ENST00000414693 480 ntBASIC7.97□□□□□ -1.13
RC3H1Q5TC82 AL389915.1-201ENST00000422463 466 ntBASIC7.97□□□□□ -1.13
RC3H1Q5TC82 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC7.97□□□□□ -1.13
RC3H1Q5TC82 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC7.97□□□□□ -1.13
RC3H1Q5TC82 CALM1P1-201ENST00000442082 433 ntBASIC7.97□□□□□ -1.13
RC3H1Q5TC82 AP000281.1-201ENST00000444036 316 ntBASIC7.97□□□□□ -1.13
RC3H1Q5TC82 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC7.97□□□□□ -1.13
RC3H1Q5TC82 HMGB1P16-201ENST00000447155 540 ntBASIC7.97□□□□□ -1.13
RC3H1Q5TC82 AL121877.1-201ENST00000453704 622 ntBASIC7.97□□□□□ -1.13
RC3H1Q5TC82 FGF7P3-201ENST00000454645 303 ntBASIC7.97□□□□□ -1.13
RC3H1Q5TC82 AC130509.1-201ENST00000464158 433 ntBASIC7.97□□□□□ -1.13
RC3H1Q5TC82 AC092865.4-201ENST00000477936 615 ntBASIC7.97□□□□□ -1.13
RC3H1Q5TC82 RN7SL629P-201ENST00000489622 285 ntBASIC7.97□□□□□ -1.13
RC3H1Q5TC82 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC7.97□□□□□ -1.13
RC3H1Q5TC82 HMGB1P29-201ENST00000505659 499 ntBASIC7.97□□□□□ -1.13
RC3H1Q5TC82 AC091965.3-201ENST00000506236 208 ntBASIC7.97□□□□□ -1.13
RC3H1Q5TC82 AC095057.1-201ENST00000507583 168 ntBASIC7.97□□□□□ -1.13
RC3H1Q5TC82 NDUFB4P2-201ENST00000509515 391 ntBASIC7.97□□□□□ -1.13
RC3H1Q5TC82 AC010486.1-201ENST00000511793 424 ntBASIC7.97□□□□□ -1.13
RC3H1Q5TC82 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC7.97□□□□□ -1.13
RC3H1Q5TC82 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC7.97□□□□□ -1.13
RC3H1Q5TC82 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC7.97□□□□□ -1.13
RC3H1Q5TC82 SOX9-AS1-208ENST00000529667 340 ntTSL 3 BASIC7.97□□□□□ -1.13
RC3H1Q5TC82 OR5AP1P-201ENST00000529730 940 ntBASIC7.97□□□□□ -1.13
RC3H1Q5TC82 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC7.97□□□□□ -1.13
RC3H1Q5TC82 AC079600.1-201ENST00000550326 297 ntBASIC7.97□□□□□ -1.13
RC3H1Q5TC82 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC7.97□□□□□ -1.13
RC3H1Q5TC82 BNIP3P8-201ENST00000597863 560 ntBASIC7.97□□□□□ -1.13
RC3H1Q5TC82 MIR6826-201ENST00000617808 98 ntBASIC7.97□□□□□ -1.13
RC3H1Q5TC82 AL445670.1-201ENST00000618889 801 ntBASIC7.97□□□□□ -1.13
RC3H1Q5TC82 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC7.97□□□□□ -1.13
RC3H1Q5TC82 ARFGAP2-230ENST00000629231 213 ntTSL 5 BASIC7.97□□□□□ -1.13
RC3H1Q5TC82 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
RC3H1Q5TC82 TMC5-206ENST00000561503 2487 ntTSL 2 BASIC7.97□□□□□ -1.13
RC3H1Q5TC82 ATR-201ENST00000350721 8249 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
RC3H1Q5TC82 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC7.97□□□□□ -1.13
RC3H1Q5TC82 SHQ1P1-201ENST00000437111 1544 ntBASIC7.97□□□□□ -1.13
RC3H1Q5TC82 OPALIN-201ENST00000371172 3557 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
RC3H1Q5TC82 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
RC3H1Q5TC82 ADAMTS9-201ENST00000295903 7060 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
RC3H1Q5TC82 SPATA31B1P-201ENST00000434692 4016 ntBASIC7.97□□□□□ -1.13
RC3H1Q5TC82 ZNF426-202ENST00000535489 2375 ntAPPRIS P3 TSL 1 (best) BASIC7.97□□□□□ -1.13
RC3H1Q5TC82 CU633906.1-201ENST00000621924 2380 ntTSL 3 BASIC7.97□□□□□ -1.13
RC3H1Q5TC82 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
RC3H1Q5TC82 IL1RAP-202ENST00000317757 5413 ntTSL 1 (best) BASIC7.96□□□□□ -1.13
RC3H1Q5TC82 ARHGAP20-203ENST00000527598 5998 ntAPPRIS ALT2 TSL 1 (best) BASIC7.96□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms