Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 ARPP21-207ENST00000417925 3086 ntTSL 2 BASIC8□□□□□ -1.13
VARS2Q5ST30 UNC79-201ENST00000256339 8400 ntAPPRIS P2 TSL 5 BASIC8□□□□□ -1.13
VARS2Q5ST30 SOX6-211ENST00000528429 2656 ntAPPRIS ALT2 TSL 1 (best) BASIC8□□□□□ -1.13
VARS2Q5ST30 FAM120B-203ENST00000537664 3212 ntAPPRIS ALT2 TSL 2 BASIC8□□□□□ -1.13
VARS2Q5ST30 USP9YP4-201ENST00000424401 1745 ntBASIC8□□□□□ -1.13
VARS2Q5ST30 KALRN-202ENST00000291478 10888 ntTSL 1 (best) BASIC8□□□□□ -1.13
VARS2Q5ST30 MAPK10-279ENST00000641157 2449 ntBASIC8□□□□□ -1.13
VARS2Q5ST30 SPA17-204ENST00000532692 4949 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
VARS2Q5ST30 JAZF1-201ENST00000283928 3125 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
VARS2Q5ST30 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC8□□□□□ -1.13
VARS2Q5ST30 AC018765.1-201ENST00000623357 3446 ntBASIC8□□□□□ -1.13
VARS2Q5ST30 C7-201ENST00000313164 4257 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
VARS2Q5ST30 ELOVL5-207ENST00000542638 2875 ntTSL 1 (best) BASIC8□□□□□ -1.13
VARS2Q5ST30 ZNF90-201ENST00000418063 2310 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
VARS2Q5ST30 ZNF200-203ENST00000396871 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC8□□□□□ -1.13
VARS2Q5ST30 MARF1-201ENST00000396368 7743 ntAPPRIS P3 TSL 1 (best) BASIC7.99□□□□□ -1.13
VARS2Q5ST30 PCDH15-226ENST00000613657 6329 ntAPPRIS ALT2 TSL 5 BASIC7.99□□□□□ -1.13
VARS2Q5ST30 ZNF793-208ENST00000588578 4549 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
VARS2Q5ST30 CTNND1-202ENST00000361332 6295 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
VARS2Q5ST30 RIF1-205ENST00000444746 7897 ntAPPRIS P3 TSL 1 (best) BASIC7.99□□□□□ -1.13
VARS2Q5ST30 IRAK4-201ENST00000431837 4147 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
VARS2Q5ST30 C14orf166-201ENST00000261700 7075 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
VARS2Q5ST30 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC7.99□□□□□ -1.13
VARS2Q5ST30 AC121333.1-201ENST00000567488 2709 ntBASIC7.99□□□□□ -1.13
VARS2Q5ST30 CDC42SE1-201ENST00000357235 3045 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
VARS2Q5ST30 CTSL3P-201ENST00000354530 657 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
VARS2Q5ST30 ZSCAN12-201ENST00000361028 5495 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
VARS2Q5ST30 RN7SKP36-201ENST00000363997 312 ntBASIC7.99□□□□□ -1.13
VARS2Q5ST30 RNU4-31P-201ENST00000384211 141 ntBASIC7.99□□□□□ -1.13
VARS2Q5ST30 AL157702.1-201ENST00000398764 426 ntBASIC7.99□□□□□ -1.13
VARS2Q5ST30 AL359715.1-201ENST00000404330 555 ntBASIC7.99□□□□□ -1.13
VARS2Q5ST30 Y_RNA.793-201ENST00000411222 111 ntBASIC7.99□□□□□ -1.13
VARS2Q5ST30 RBPJP6-201ENST00000411556 1431 ntBASIC7.99□□□□□ -1.13
VARS2Q5ST30 AL355862.1-201ENST00000412705 353 ntBASIC7.99□□□□□ -1.13
VARS2Q5ST30 RPSAP35-201ENST00000413753 818 ntBASIC7.99□□□□□ -1.13
VARS2Q5ST30 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC7.99□□□□□ -1.13
VARS2Q5ST30 ELOCP20-201ENST00000422460 345 ntBASIC7.99□□□□□ -1.13
VARS2Q5ST30 AC097468.2-201ENST00000429343 553 ntTSL 4 BASIC7.99□□□□□ -1.13
VARS2Q5ST30 PCBP2P1-201ENST00000437262 977 ntBASIC7.99□□□□□ -1.13
VARS2Q5ST30 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC7.99□□□□□ -1.13
VARS2Q5ST30 AC099786.1-201ENST00000446238 670 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
VARS2Q5ST30 AC016831.3-201ENST00000446451 1723 ntBASIC7.99□□□□□ -1.13
VARS2Q5ST30 AC133473.1-201ENST00000455173 299 ntBASIC7.99□□□□□ -1.13
VARS2Q5ST30 AC015820.1-201ENST00000473882 321 ntBASIC7.99□□□□□ -1.13
VARS2Q5ST30 AC092349.1-201ENST00000504903 310 ntBASIC7.99□□□□□ -1.13
VARS2Q5ST30 HSPD1P15-201ENST00000505573 1122 ntBASIC7.99□□□□□ -1.13
VARS2Q5ST30 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC7.99□□□□□ -1.13
VARS2Q5ST30 AC079600.3-201ENST00000547898 447 ntTSL 5 BASIC7.99□□□□□ -1.13
VARS2Q5ST30 AC010547.7-201ENST00000570323 333 ntBASIC7.99□□□□□ -1.13
VARS2Q5ST30 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC7.99□□□□□ -1.13
VARS2Q5ST30 HNRNPA3P9-201ENST00000604913 979 ntBASIC7.99□□□□□ -1.13
VARS2Q5ST30 RN7SL778P-201ENST00000607160 297 ntBASIC7.99□□□□□ -1.13
VARS2Q5ST30 AC064801.1-201ENST00000612025 407 ntBASIC7.99□□□□□ -1.13
VARS2Q5ST30 NPPA-AS1_1.1-201ENST00000622391 173 ntBASIC7.99□□□□□ -1.13
VARS2Q5ST30 AL160396.1-201ENST00000637433 575 ntTSL 4 BASIC7.99□□□□□ -1.13
VARS2Q5ST30 MTPN-201ENST00000393085 3738 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
VARS2Q5ST30 IKZF3-203ENST00000346872 9667 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
VARS2Q5ST30 ADAM3A-205ENST00000481351 2379 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
VARS2Q5ST30 NTRK3-212ENST00000558676 4670 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
VARS2Q5ST30 MAVS-201ENST00000416600 11596 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
VARS2Q5ST30 C15orf41-202ENST00000437989 2240 ntAPPRIS P3 TSL 1 (best) BASIC7.99□□□□□ -1.13
VARS2Q5ST30 CD46-208ENST00000367042 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC7.99□□□□□ -1.13
VARS2Q5ST30 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC7.99□□□□□ -1.13
VARS2Q5ST30 AC006019.2-201ENST00000451116 3044 ntTSL 2 BASIC7.99□□□□□ -1.13
VARS2Q5ST30 ODF2L-201ENST00000294678 4267 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
VARS2Q5ST30 OR10AD1-201ENST00000310248 1305 ntAPPRIS P1 BASIC7.99□□□□□ -1.13
VARS2Q5ST30 COBLL1-203ENST00000392717 9523 ntAPPRIS ALT2 TSL 5 BASIC7.99□□□□□ -1.13
VARS2Q5ST30 PTBP3-204ENST00000374255 3413 ntAPPRIS P3 TSL 5 BASIC7.99□□□□□ -1.13
VARS2Q5ST30 PLS3-202ENST00000355899 3280 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
VARS2Q5ST30 TEX11-204ENST00000395889 3133 ntAPPRIS P3 TSL 2 BASIC7.98□□□□□ -1.13
VARS2Q5ST30 OR2T11-202ENST00000641193 3770 ntAPPRIS P1 BASIC7.98□□□□□ -1.13
VARS2Q5ST30 RERE-203ENST00000400907 2973 ntTSL 5 BASIC7.98□□□□□ -1.13
VARS2Q5ST30 FAM107A-202ENST00000394481 3465 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
VARS2Q5ST30 WDR44-201ENST00000254029 4111 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
VARS2Q5ST30 KIAA1324L-203ENST00000416314 3179 ntAPPRIS P3 TSL 2 BASIC7.98□□□□□ -1.13
VARS2Q5ST30 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
VARS2Q5ST30 MITF-203ENST00000328528 4680 ntTSL 5 BASIC7.98□□□□□ -1.13
VARS2Q5ST30 LNPEP-201ENST00000231368 12752 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
VARS2Q5ST30 ZNF674-207ENST00000523374 4073 ntAPPRIS P3 TSL 1 (best) BASIC7.98□□□□□ -1.13
VARS2Q5ST30 ADGRE1-201ENST00000250572 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC7.98□□□□□ -1.13
VARS2Q5ST30 NBPF15-206ENST00000581897 4272 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
VARS2Q5ST30 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
VARS2Q5ST30 INTS6-202ENST00000398119 7041 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
VARS2Q5ST30 MIR498-201ENST00000385134 124 ntBASIC7.98□□□□□ -1.13
VARS2Q5ST30 TRBV9-201ENST00000390363 390 ntAPPRIS P1 BASIC7.98□□□□□ -1.13
VARS2Q5ST30 SNORD58.1-201ENST00000391313 66 ntBASIC7.98□□□□□ -1.13
VARS2Q5ST30 FLG-AS1-202ENST00000392688 2995 ntTSL 2 BASIC7.98□□□□□ -1.13
VARS2Q5ST30 AL034417.1-201ENST00000399343 800 ntBASIC7.98□□□□□ -1.13
VARS2Q5ST30 BRD8-203ENST00000402931 2982 ntTSL 5 BASIC7.98□□□□□ -1.13
VARS2Q5ST30 GAPDHP69-201ENST00000425504 1008 ntBASIC7.98□□□□□ -1.13
VARS2Q5ST30 PTCSC2-201ENST00000430058 204 ntTSL 2 BASIC7.98□□□□□ -1.13
VARS2Q5ST30 FGF12-AS3-201ENST00000452848 291 ntTSL 3 BASIC7.98□□□□□ -1.13
VARS2Q5ST30 AL353752.1-201ENST00000454946 260 ntBASIC7.98□□□□□ -1.13
VARS2Q5ST30 AC009411.2-201ENST00000458359 539 ntTSL 4 BASIC7.98□□□□□ -1.13
VARS2Q5ST30 SNORA35.1-201ENST00000458908 128 ntBASIC7.98□□□□□ -1.13
VARS2Q5ST30 TUBBP11-201ENST00000472255 252 ntBASIC7.98□□□□□ -1.13
VARS2Q5ST30 AC005550.2-201ENST00000476382 318 ntBASIC7.98□□□□□ -1.13
VARS2Q5ST30 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC7.98□□□□□ -1.13
VARS2Q5ST30 AC022447.4-201ENST00000504053 364 ntBASIC7.98□□□□□ -1.13
VARS2Q5ST30 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC7.98□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 130.9 ms