Protein–RNA interactions for Protein: Q3LFD5

USP41, Putative ubiquitin carboxyl-terminal hydrolase 41, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP41Q3LFD5 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
USP41Q3LFD5 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC5.29□□□□□ -1.56
USP41Q3LFD5 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC5.29□□□□□ -1.56
USP41Q3LFD5 AL512310.9-201ENST00000553311 948 ntBASIC5.29□□□□□ -1.56
USP41Q3LFD5 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
USP41Q3LFD5 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC5.29□□□□□ -1.56
USP41Q3LFD5 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC5.29□□□□□ -1.56
USP41Q3LFD5 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC5.29□□□□□ -1.56
USP41Q3LFD5 SNX6P1-201ENST00000601728 1224 ntBASIC5.29□□□□□ -1.56
USP41Q3LFD5 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC5.29□□□□□ -1.56
USP41Q3LFD5 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC5.29□□□□□ -1.56
USP41Q3LFD5 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC5.29□□□□□ -1.56
USP41Q3LFD5 MIR7641-1-201ENST00000627518 61 ntBASIC5.29□□□□□ -1.56
USP41Q3LFD5 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC5.29□□□□□ -1.56
USP41Q3LFD5 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
USP41Q3LFD5 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
USP41Q3LFD5 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
USP41Q3LFD5 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.29□□□□□ -1.56
USP41Q3LFD5 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
USP41Q3LFD5 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
USP41Q3LFD5 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
USP41Q3LFD5 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC5.29□□□□□ -1.56
USP41Q3LFD5 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.29□□□□□ -1.56
USP41Q3LFD5 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
USP41Q3LFD5 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.29□□□□□ -1.56
USP41Q3LFD5 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
USP41Q3LFD5 TRIM51GP-201ENST00000534741 1350 ntBASIC5.29□□□□□ -1.56
USP41Q3LFD5 AL731566.1-201ENST00000620490 1937 ntBASIC5.29□□□□□ -1.56
USP41Q3LFD5 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
USP41Q3LFD5 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
USP41Q3LFD5 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
USP41Q3LFD5 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.28□□□□□ -1.56
USP41Q3LFD5 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
USP41Q3LFD5 RNU6-729P-201ENST00000384399 107 ntBASIC5.28□□□□□ -1.56
USP41Q3LFD5 AL035079.1-201ENST00000405210 287 ntBASIC5.28□□□□□ -1.56
USP41Q3LFD5 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC5.28□□□□□ -1.56
USP41Q3LFD5 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
USP41Q3LFD5 AC004074.1-201ENST00000421810 1063 ntBASIC5.28□□□□□ -1.56
USP41Q3LFD5 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC5.28□□□□□ -1.56
USP41Q3LFD5 NDUFA5P10-201ENST00000432147 357 ntBASIC5.28□□□□□ -1.56
USP41Q3LFD5 AC093716.1-201ENST00000435923 377 ntBASIC5.28□□□□□ -1.56
USP41Q3LFD5 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC5.28□□□□□ -1.56
USP41Q3LFD5 CREM-220ENST00000463314 964 ntTSL 2 BASIC5.28□□□□□ -1.56
USP41Q3LFD5 RN7SL459P-201ENST00000481078 302 ntBASIC5.28□□□□□ -1.56
USP41Q3LFD5 AC116562.1-201ENST00000485355 781 ntBASIC5.28□□□□□ -1.56
USP41Q3LFD5 RPL23AP72-201ENST00000492447 435 ntBASIC5.28□□□□□ -1.56
USP41Q3LFD5 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC5.28□□□□□ -1.56
USP41Q3LFD5 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC5.28□□□□□ -1.56
USP41Q3LFD5 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC5.28□□□□□ -1.56
USP41Q3LFD5 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC5.28□□□□□ -1.56
USP41Q3LFD5 AC068339.2-201ENST00000534395 618 ntBASIC5.28□□□□□ -1.56
USP41Q3LFD5 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC5.28□□□□□ -1.56
USP41Q3LFD5 AC021483.2-201ENST00000567415 758 ntBASIC5.28□□□□□ -1.56
USP41Q3LFD5 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC5.28□□□□□ -1.56
USP41Q3LFD5 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC5.28□□□□□ -1.56
USP41Q3LFD5 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC5.28□□□□□ -1.56
USP41Q3LFD5 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC5.28□□□□□ -1.56
USP41Q3LFD5 AC105148.1-201ENST00000604961 409 ntBASIC5.28□□□□□ -1.56
USP41Q3LFD5 AC073137.1-201ENST00000605636 634 ntBASIC5.28□□□□□ -1.56
USP41Q3LFD5 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC5.28□□□□□ -1.56
USP41Q3LFD5 AC004241.3-201ENST00000611728 517 ntBASIC5.28□□□□□ -1.56
USP41Q3LFD5 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
USP41Q3LFD5 AC108359.1-201ENST00000616451 1211 ntBASIC5.28□□□□□ -1.56
USP41Q3LFD5 AC019206.1-201ENST00000621938 425 ntBASIC5.28□□□□□ -1.56
USP41Q3LFD5 CR381572.2-201ENST00000624852 397 ntBASIC5.28□□□□□ -1.56
USP41Q3LFD5 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC5.28□□□□□ -1.56
USP41Q3LFD5 FRG1DP-201ENST00000635586 771 ntBASIC5.28□□□□□ -1.56
USP41Q3LFD5 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC5.28□□□□□ -1.56
USP41Q3LFD5 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
USP41Q3LFD5 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
USP41Q3LFD5 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC5.28□□□□□ -1.56
USP41Q3LFD5 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
USP41Q3LFD5 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC5.28□□□□□ -1.56
USP41Q3LFD5 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
USP41Q3LFD5 AC104623.2-202ENST00000623477 4002 ntBASIC5.27□□□□□ -1.57
USP41Q3LFD5 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
USP41Q3LFD5 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
USP41Q3LFD5 MFSD8-216ENST00000641147 4009 ntBASIC5.27□□□□□ -1.57
USP41Q3LFD5 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
USP41Q3LFD5 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
USP41Q3LFD5 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
USP41Q3LFD5 RNA5SP505-201ENST00000364748 108 ntBASIC5.27□□□□□ -1.57
USP41Q3LFD5 AC007618.1-201ENST00000366455 732 ntBASIC5.27□□□□□ -1.57
USP41Q3LFD5 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC5.27□□□□□ -1.57
USP41Q3LFD5 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
USP41Q3LFD5 TAF9BP2-201ENST00000400856 499 ntBASIC5.27□□□□□ -1.57
USP41Q3LFD5 MIR298-201ENST00000401212 88 ntBASIC5.27□□□□□ -1.57
USP41Q3LFD5 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC5.27□□□□□ -1.57
USP41Q3LFD5 AL354692.1-201ENST00000423044 315 ntBASIC5.27□□□□□ -1.57
USP41Q3LFD5 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
USP41Q3LFD5 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC5.27□□□□□ -1.57
USP41Q3LFD5 AL512661.1-201ENST00000434586 1253 ntBASIC5.27□□□□□ -1.57
USP41Q3LFD5 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC5.27□□□□□ -1.57
USP41Q3LFD5 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC5.27□□□□□ -1.57
USP41Q3LFD5 TXNP5-201ENST00000441043 315 ntBASIC5.27□□□□□ -1.57
USP41Q3LFD5 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
USP41Q3LFD5 MOB1AP2-201ENST00000446060 614 ntBASIC5.27□□□□□ -1.57
USP41Q3LFD5 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC5.27□□□□□ -1.57
USP41Q3LFD5 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC5.27□□□□□ -1.57
USP41Q3LFD5 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms