Protein–RNA interactions for Protein: Q15475

SIX1, Homeobox protein SIX1, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX1Q15475 AC139769.1-204ENST00000472297 1931 ntBASIC4.69□□□□□ -1.66
SIX1Q15475 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SIX1Q15475 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
SIX1Q15475 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.69□□□□□ -1.66
SIX1Q15475 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
SIX1Q15475 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
SIX1Q15475 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.69□□□□□ -1.66
SIX1Q15475 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SIX1Q15475 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SIX1Q15475 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SIX1Q15475 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC4.68□□□□□ -1.66
SIX1Q15475 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SIX1Q15475 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.68□□□□□ -1.66
SIX1Q15475 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
SIX1Q15475 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.68□□□□□ -1.66
SIX1Q15475 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SIX1Q15475 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
SIX1Q15475 AC067945.1-201ENST00000342609 618 ntBASIC4.68□□□□□ -1.66
SIX1Q15475 RNU1-108P-201ENST00000362556 161 ntBASIC4.68□□□□□ -1.66
SIX1Q15475 RN7SKP115-201ENST00000363177 317 ntBASIC4.68□□□□□ -1.66
SIX1Q15475 MIR659-201ENST00000384963 97 ntBASIC4.68□□□□□ -1.66
SIX1Q15475 AL078604.1-201ENST00000404609 466 ntBASIC4.68□□□□□ -1.66
SIX1Q15475 RN7SKP216-201ENST00000411050 312 ntBASIC4.68□□□□□ -1.66
SIX1Q15475 GSTM3P2-201ENST00000412746 530 ntBASIC4.68□□□□□ -1.66
SIX1Q15475 AL139128.1-201ENST00000413921 941 ntBASIC4.68□□□□□ -1.66
SIX1Q15475 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC4.68□□□□□ -1.66
SIX1Q15475 OR13Z1P-201ENST00000416141 834 ntBASIC4.68□□□□□ -1.66
SIX1Q15475 BX510359.2-201ENST00000417920 305 ntBASIC4.68□□□□□ -1.66
SIX1Q15475 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.68□□□□□ -1.66
SIX1Q15475 AC062016.2-201ENST00000420950 676 ntBASIC4.68□□□□□ -1.66
SIX1Q15475 MTND2P11-201ENST00000423638 648 ntBASIC4.68□□□□□ -1.66
SIX1Q15475 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC4.68□□□□□ -1.66
SIX1Q15475 AC012497.1-201ENST00000429392 575 ntBASIC4.68□□□□□ -1.66
SIX1Q15475 ARL6IP1P2-201ENST00000431356 563 ntBASIC4.68□□□□□ -1.66
SIX1Q15475 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC4.68□□□□□ -1.66
SIX1Q15475 RAB9AP5-201ENST00000437794 597 ntBASIC4.68□□□□□ -1.66
SIX1Q15475 RAB9AP2-201ENST00000443911 597 ntBASIC4.68□□□□□ -1.66
SIX1Q15475 RPL36AP15-201ENST00000444514 266 ntBASIC4.68□□□□□ -1.66
SIX1Q15475 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC4.68□□□□□ -1.66
SIX1Q15475 OR1H1P-201ENST00000448731 937 ntBASIC4.68□□□□□ -1.66
SIX1Q15475 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC4.68□□□□□ -1.66
SIX1Q15475 EIF2S2P5-201ENST00000457635 968 ntBASIC4.68□□□□□ -1.66
SIX1Q15475 AC079804.1-201ENST00000461922 436 ntBASIC4.68□□□□□ -1.66
SIX1Q15475 AC104763.1-201ENST00000475274 360 ntBASIC4.68□□□□□ -1.66
SIX1Q15475 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SIX1Q15475 MTND4LP2-201ENST00000502312 285 ntBASIC4.68□□□□□ -1.66
SIX1Q15475 PANCR-201ENST00000503456 493 ntTSL 5 BASIC4.68□□□□□ -1.66
SIX1Q15475 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC4.68□□□□□ -1.66
SIX1Q15475 CDV3-208ENST00000511392 554 ntTSL 5 BASIC4.68□□□□□ -1.66
SIX1Q15475 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC4.68□□□□□ -1.66
SIX1Q15475 MAL2-201ENST00000522112 573 ntTSL 4 BASIC4.68□□□□□ -1.66
SIX1Q15475 SOX5P1-201ENST00000524155 1127 ntBASIC4.68□□□□□ -1.66
SIX1Q15475 OR5D15P-201ENST00000531671 942 ntBASIC4.68□□□□□ -1.66
SIX1Q15475 GLRXP2-201ENST00000555594 321 ntBASIC4.68□□□□□ -1.66
SIX1Q15475 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC4.68□□□□□ -1.66
SIX1Q15475 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC4.68□□□□□ -1.66
SIX1Q15475 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC4.68□□□□□ -1.66
SIX1Q15475 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC4.68□□□□□ -1.66
SIX1Q15475 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC4.68□□□□□ -1.66
SIX1Q15475 AC006272.2-201ENST00000594725 163 ntBASIC4.68□□□□□ -1.66
SIX1Q15475 BPIFA4P-203ENST00000603168 689 ntBASIC4.68□□□□□ -1.66
SIX1Q15475 AL049539.1-201ENST00000611964 459 ntBASIC4.68□□□□□ -1.66
SIX1Q15475 MIR6853-201ENST00000619642 74 ntBASIC4.68□□□□□ -1.66
SIX1Q15475 VN2R3P-201ENST00000422626 1412 ntBASIC4.68□□□□□ -1.66
SIX1Q15475 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
SIX1Q15475 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
SIX1Q15475 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SIX1Q15475 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
SIX1Q15475 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SIX1Q15475 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.68□□□□□ -1.66
SIX1Q15475 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SIX1Q15475 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SIX1Q15475 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.67□□□□□ -1.66
SIX1Q15475 CROT-204ENST00000442291 1993 ntTSL 5 BASIC4.67□□□□□ -1.66
SIX1Q15475 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SIX1Q15475 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SIX1Q15475 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.67□□□□□ -1.66
SIX1Q15475 MFSD4BP1-201ENST00000513330 1552 ntBASIC4.67□□□□□ -1.66
SIX1Q15475 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SIX1Q15475 AC010928.1-201ENST00000592477 1447 ntBASIC4.67□□□□□ -1.66
SIX1Q15475 RBPJP2-201ENST00000618187 1444 ntBASIC4.67□□□□□ -1.66
SIX1Q15475 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC4.67□□□□□ -1.66
SIX1Q15475 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SIX1Q15475 RNU6-618P-201ENST00000363518 112 ntBASIC4.67□□□□□ -1.66
SIX1Q15475 RN7SKP103-201ENST00000363848 320 ntBASIC4.67□□□□□ -1.66
SIX1Q15475 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC4.67□□□□□ -1.66
SIX1Q15475 MAST4-207ENST00000407621 559 ntTSL 2 BASIC4.67□□□□□ -1.66
SIX1Q15475 GLS-203ENST00000409215 632 ntTSL 4 BASIC4.67□□□□□ -1.66
SIX1Q15475 SNORA74C-2-201ENST00000411179 201 ntBASIC4.67□□□□□ -1.66
SIX1Q15475 COX6B1P1-201ENST00000415962 213 ntBASIC4.67□□□□□ -1.66
SIX1Q15475 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC4.67□□□□□ -1.66
SIX1Q15475 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC4.67□□□□□ -1.66
SIX1Q15475 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC4.67□□□□□ -1.66
SIX1Q15475 AL590762.4-201ENST00000425885 253 ntBASIC4.67□□□□□ -1.66
SIX1Q15475 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC4.67□□□□□ -1.66
SIX1Q15475 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC4.67□□□□□ -1.66
SIX1Q15475 YWHAZP2-201ENST00000440317 728 ntBASIC4.67□□□□□ -1.66
SIX1Q15475 SUMO2P1-206ENST00000445436 284 ntBASIC4.67□□□□□ -1.66
SIX1Q15475 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC4.67□□□□□ -1.66
SIX1Q15475 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 113.4 ms