Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
HIST1H1AQ02539 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC3.58□□□□□ -1.84
HIST1H1AQ02539 U8.4-201ENST00000363626 134 ntBASIC3.58□□□□□ -1.84
HIST1H1AQ02539 RNU4-4P-201ENST00000364588 130 ntBASIC3.58□□□□□ -1.84
HIST1H1AQ02539 RNU6-1279P-201ENST00000383917 103 ntBASIC3.58□□□□□ -1.84
HIST1H1AQ02539 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
HIST1H1AQ02539 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
HIST1H1AQ02539 RNA5SP345-201ENST00000410646 108 ntBASIC3.58□□□□□ -1.84
HIST1H1AQ02539 RN7SKP273-201ENST00000411392 314 ntBASIC3.58□□□□□ -1.84
HIST1H1AQ02539 GSTM3P2-201ENST00000412746 530 ntBASIC3.58□□□□□ -1.84
HIST1H1AQ02539 AL450992.3-201ENST00000413192 568 ntBASIC3.58□□□□□ -1.84
HIST1H1AQ02539 RPL7P57-201ENST00000423238 740 ntBASIC3.58□□□□□ -1.84
HIST1H1AQ02539 NANOGP6-201ENST00000429190 847 ntBASIC3.58□□□□□ -1.84
HIST1H1AQ02539 BX119904.1-201ENST00000432026 348 ntBASIC3.58□□□□□ -1.84
HIST1H1AQ02539 NAP1L4P3-201ENST00000432820 1147 ntBASIC3.58□□□□□ -1.84
HIST1H1AQ02539 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC3.58□□□□□ -1.84
HIST1H1AQ02539 TDGF1P1-201ENST00000445734 527 ntBASIC3.58□□□□□ -1.84
HIST1H1AQ02539 AC073850.1-201ENST00000449243 255 ntBASIC3.58□□□□□ -1.84
HIST1H1AQ02539 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC3.58□□□□□ -1.84
HIST1H1AQ02539 IFNWP4-201ENST00000453148 294 ntBASIC3.58□□□□□ -1.84
HIST1H1AQ02539 SEPT14P1-201ENST00000458703 648 ntBASIC3.58□□□□□ -1.84
HIST1H1AQ02539 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC3.58□□□□□ -1.84
HIST1H1AQ02539 AC006499.3-201ENST00000506077 748 ntBASIC3.58□□□□□ -1.84
HIST1H1AQ02539 AC147055.3-201ENST00000510547 851 ntBASIC3.58□□□□□ -1.84
HIST1H1AQ02539 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
HIST1H1AQ02539 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
HIST1H1AQ02539 RNA5SP34-201ENST00000516887 130 ntBASIC3.58□□□□□ -1.84
HIST1H1AQ02539 AC133555.2-201ENST00000550213 292 ntBASIC3.58□□□□□ -1.84
HIST1H1AQ02539 AC093249.4-201ENST00000564755 259 ntBASIC3.58□□□□□ -1.84
HIST1H1AQ02539 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC3.58□□□□□ -1.84
HIST1H1AQ02539 HMGB2P1-201ENST00000591146 634 ntBASIC3.58□□□□□ -1.84
HIST1H1AQ02539 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC3.58□□□□□ -1.84
HIST1H1AQ02539 AC005520.3-201ENST00000602874 370 ntBASIC3.58□□□□□ -1.84
HIST1H1AQ02539 AC130352.1-201ENST00000602979 661 ntBASIC3.58□□□□□ -1.84
HIST1H1AQ02539 OR7A19P-201ENST00000608051 733 ntBASIC3.58□□□□□ -1.84
HIST1H1AQ02539 AP001521.2-201ENST00000608772 546 ntBASIC3.58□□□□□ -1.84
HIST1H1AQ02539 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
HIST1H1AQ02539 AP006248.2-201ENST00000623309 592 ntBASIC3.58□□□□□ -1.84
HIST1H1AQ02539 CGA-206ENST00000630630 832 ntTSL 2 BASIC3.58□□□□□ -1.84
HIST1H1AQ02539 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
HIST1H1AQ02539 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC3.58□□□□□ -1.84
HIST1H1AQ02539 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
HIST1H1AQ02539 AP001002.1-201ENST00000625148 1513 ntBASIC3.58□□□□□ -1.84
HIST1H1AQ02539 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC3.58□□□□□ -1.84
HIST1H1AQ02539 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
HIST1H1AQ02539 AC134882.1-201ENST00000603738 1676 ntBASIC3.58□□□□□ -1.84
HIST1H1AQ02539 AL049555.1-201ENST00000562834 1933 ntBASIC3.58□□□□□ -1.84
HIST1H1AQ02539 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC3.58□□□□□ -1.84
HIST1H1AQ02539 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
HIST1H1AQ02539 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
HIST1H1AQ02539 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
HIST1H1AQ02539 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.57□□□□□ -1.84
HIST1H1AQ02539 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
HIST1H1AQ02539 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC3.57□□□□□ -1.84
HIST1H1AQ02539 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
HIST1H1AQ02539 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
HIST1H1AQ02539 SNORD74.4-201ENST00000364129 80 ntBASIC3.57□□□□□ -1.84
HIST1H1AQ02539 MIR3074-201ENST00000384885 81 ntBASIC3.57□□□□□ -1.84
HIST1H1AQ02539 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC3.57□□□□□ -1.84
HIST1H1AQ02539 RN7SKP213-201ENST00000410746 298 ntBASIC3.57□□□□□ -1.84
HIST1H1AQ02539 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC3.57□□□□□ -1.84
HIST1H1AQ02539 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC3.57□□□□□ -1.84
HIST1H1AQ02539 CHEK2P3-201ENST00000416118 248 ntBASIC3.57□□□□□ -1.84
HIST1H1AQ02539 GTF3AP1-201ENST00000416942 1004 ntBASIC3.57□□□□□ -1.84
HIST1H1AQ02539 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
HIST1H1AQ02539 AL592437.2-201ENST00000421655 2434 ntBASIC3.57□□□□□ -1.84
HIST1H1AQ02539 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
HIST1H1AQ02539 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC3.57□□□□□ -1.84
HIST1H1AQ02539 RPL12P46-201ENST00000436610 195 ntBASIC3.57□□□□□ -1.84
HIST1H1AQ02539 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC3.57□□□□□ -1.84
HIST1H1AQ02539 MYO5BP2-201ENST00000449815 1277 ntBASIC3.57□□□□□ -1.84
HIST1H1AQ02539 EIF4A2P2-201ENST00000455776 1070 ntBASIC3.57□□□□□ -1.84
HIST1H1AQ02539 RPSAP50-201ENST00000481955 852 ntBASIC3.57□□□□□ -1.84
HIST1H1AQ02539 AC146944.2-203ENST00000502493 354 ntBASIC3.57□□□□□ -1.84
HIST1H1AQ02539 MRPS33P2-201ENST00000507850 322 ntBASIC3.57□□□□□ -1.84
HIST1H1AQ02539 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC3.57□□□□□ -1.84
HIST1H1AQ02539 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC3.57□□□□□ -1.84
HIST1H1AQ02539 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC3.57□□□□□ -1.84
HIST1H1AQ02539 PPBPP1-201ENST00000510807 373 ntBASIC3.57□□□□□ -1.84
HIST1H1AQ02539 AC139495.1-202ENST00000513164 354 ntBASIC3.57□□□□□ -1.84
HIST1H1AQ02539 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
HIST1H1AQ02539 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC3.57□□□□□ -1.84
HIST1H1AQ02539 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC3.57□□□□□ -1.84
HIST1H1AQ02539 AC135001.1-201ENST00000544546 283 ntBASIC3.57□□□□□ -1.84
HIST1H1AQ02539 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC3.57□□□□□ -1.84
HIST1H1AQ02539 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC3.57□□□□□ -1.84
HIST1H1AQ02539 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC3.57□□□□□ -1.84
HIST1H1AQ02539 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC3.57□□□□□ -1.84
HIST1H1AQ02539 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC3.57□□□□□ -1.84
HIST1H1AQ02539 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC3.57□□□□□ -1.84
HIST1H1AQ02539 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC3.57□□□□□ -1.84
HIST1H1AQ02539 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
HIST1H1AQ02539 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC3.57□□□□□ -1.84
HIST1H1AQ02539 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC3.57□□□□□ -1.84
HIST1H1AQ02539 AC067838.1-201ENST00000606064 577 ntBASIC3.57□□□□□ -1.84
HIST1H1AQ02539 AC017076.1-201ENST00000607613 578 ntBASIC3.57□□□□□ -1.84
HIST1H1AQ02539 OR6R2P-201ENST00000609216 300 ntBASIC3.57□□□□□ -1.84
HIST1H1AQ02539 AC004825.2-201ENST00000616634 455 ntBASIC3.57□□□□□ -1.84
HIST1H1AQ02539 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC3.57□□□□□ -1.84
HIST1H1AQ02539 AC009951.1-201ENST00000623674 2614 ntBASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 87 ms