Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.04□□□□□ -1.76
UBA52P62987 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC4.04□□□□□ -1.76
UBA52P62987 CCDC75P1-201ENST00000469247 791 ntBASIC4.04□□□□□ -1.76
UBA52P62987 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC4.04□□□□□ -1.76
UBA52P62987 LINC02217-201ENST00000505844 687 ntTSL 2 BASIC4.04□□□□□ -1.76
UBA52P62987 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC4.04□□□□□ -1.76
UBA52P62987 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC4.04□□□□□ -1.76
UBA52P62987 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC4.04□□□□□ -1.76
UBA52P62987 AL512782.1-201ENST00000603093 364 ntBASIC4.04□□□□□ -1.76
UBA52P62987 AL139395.1-201ENST00000603662 160 ntBASIC4.04□□□□□ -1.76
UBA52P62987 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.04□□□□□ -1.76
UBA52P62987 AP001521.2-201ENST00000608772 546 ntBASIC4.04□□□□□ -1.76
UBA52P62987 AC019193.2-201ENST00000610012 634 ntBASIC4.04□□□□□ -1.76
UBA52P62987 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.04□□□□□ -1.76
UBA52P62987 AP001005.3-201ENST00000622049 129 ntBASIC4.04□□□□□ -1.76
UBA52P62987 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
UBA52P62987 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
UBA52P62987 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
UBA52P62987 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
UBA52P62987 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.04□□□□□ -1.76
UBA52P62987 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
UBA52P62987 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
UBA52P62987 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC4.04□□□□□ -1.76
UBA52P62987 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.03□□□□□ -1.76
UBA52P62987 CA1-225ENST00000626824 2405 ntTSL 5 BASIC4.03□□□□□ -1.76
UBA52P62987 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.03□□□□□ -1.76
UBA52P62987 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC4.03□□□□□ -1.76
UBA52P62987 AL672167.2-201ENST00000377164 879 ntBASIC4.03□□□□□ -1.76
UBA52P62987 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC4.03□□□□□ -1.76
UBA52P62987 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
UBA52P62987 LRRC37BP1-201ENST00000398851 714 ntBASIC4.03□□□□□ -1.76
UBA52P62987 GLULP6-201ENST00000399502 913 ntBASIC4.03□□□□□ -1.76
UBA52P62987 AL080315.1-201ENST00000406055 466 ntBASIC4.03□□□□□ -1.76
UBA52P62987 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.03□□□□□ -1.76
UBA52P62987 RPS12P5-201ENST00000423449 371 ntBASIC4.03□□□□□ -1.76
UBA52P62987 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC4.03□□□□□ -1.76
UBA52P62987 OR1H1P-201ENST00000448731 937 ntBASIC4.03□□□□□ -1.76
UBA52P62987 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.03□□□□□ -1.76
UBA52P62987 AL356390.1-201ENST00000455684 397 ntBASIC4.03□□□□□ -1.76
UBA52P62987 NDUFAF4P3-201ENST00000456468 525 ntBASIC4.03□□□□□ -1.76
UBA52P62987 PSMC1P13-201ENST00000458195 985 ntBASIC4.03□□□□□ -1.76
UBA52P62987 RPS17P2-201ENST00000461663 408 ntBASIC4.03□□□□□ -1.76
UBA52P62987 RPL7AP10-201ENST00000481016 791 ntBASIC4.03□□□□□ -1.76
UBA52P62987 AC068587.1-201ENST00000483613 781 ntBASIC4.03□□□□□ -1.76
UBA52P62987 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.03□□□□□ -1.76
UBA52P62987 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC4.03□□□□□ -1.76
UBA52P62987 PPM1AP1-201ENST00000502740 1135 ntBASIC4.03□□□□□ -1.76
UBA52P62987 AC093720.1-201ENST00000505681 714 ntBASIC4.03□□□□□ -1.76
UBA52P62987 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC4.03□□□□□ -1.76
UBA52P62987 IGKV2D-10-201ENST00000520194 281 ntBASIC4.03□□□□□ -1.76
UBA52P62987 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
UBA52P62987 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC4.03□□□□□ -1.76
UBA52P62987 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC4.03□□□□□ -1.76
UBA52P62987 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC4.03□□□□□ -1.76
UBA52P62987 AC027455.1-201ENST00000574104 594 ntBASIC4.03□□□□□ -1.76
UBA52P62987 MIR4284-201ENST00000578924 81 ntBASIC4.03□□□□□ -1.76
UBA52P62987 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4.03□□□□□ -1.76
UBA52P62987 AC104687.2-201ENST00000604442 342 ntBASIC4.03□□□□□ -1.76
UBA52P62987 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC4.03□□□□□ -1.76
UBA52P62987 AC009704.2-201ENST00000618739 483 ntBASIC4.03□□□□□ -1.76
UBA52P62987 RMST_9.1-201ENST00000619945 193 ntBASIC4.03□□□□□ -1.76
UBA52P62987 AL356121.2-201ENST00000624715 780 ntBASIC4.03□□□□□ -1.76
UBA52P62987 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC4.03□□□□□ -1.76
UBA52P62987 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
UBA52P62987 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.03□□□□□ -1.76
UBA52P62987 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
UBA52P62987 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
UBA52P62987 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
UBA52P62987 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.03□□□□□ -1.76
UBA52P62987 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
UBA52P62987 SAMMSON-226ENST00000642089 1582 ntBASIC4.02□□□□□ -1.77
UBA52P62987 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
UBA52P62987 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
UBA52P62987 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.02□□□□□ -1.77
UBA52P62987 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
UBA52P62987 AL133243.3-201ENST00000617415 3004 ntBASIC4.02□□□□□ -1.77
UBA52P62987 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
UBA52P62987 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.02□□□□□ -1.77
UBA52P62987 RNA5SP191-201ENST00000362585 102 ntBASIC4.02□□□□□ -1.77
UBA52P62987 SNORD74.4-201ENST00000364129 80 ntBASIC4.02□□□□□ -1.77
UBA52P62987 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
UBA52P62987 HMGB3P7-201ENST00000400214 611 ntBASIC4.02□□□□□ -1.77
UBA52P62987 MIR298-201ENST00000401212 88 ntBASIC4.02□□□□□ -1.77
UBA52P62987 AF186996.5-201ENST00000418098 904 ntBASIC4.02□□□□□ -1.77
UBA52P62987 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC4.02□□□□□ -1.77
UBA52P62987 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.02□□□□□ -1.77
UBA52P62987 SKP1P3-201ENST00000429280 487 ntBASIC4.02□□□□□ -1.77
UBA52P62987 RPL7P33-201ENST00000444159 742 ntBASIC4.02□□□□□ -1.77
UBA52P62987 AC104651.2-201ENST00000447549 528 ntBASIC4.02□□□□□ -1.77
UBA52P62987 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC4.02□□□□□ -1.77
UBA52P62987 IGHV5-78-201ENST00000450948 295 ntBASIC4.02□□□□□ -1.77
UBA52P62987 SSR3-206ENST00000476217 807 ntTSL 3 BASIC4.02□□□□□ -1.77
UBA52P62987 AC011005.3-201ENST00000491624 395 ntBASIC4.02□□□□□ -1.77
UBA52P62987 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.02□□□□□ -1.77
UBA52P62987 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC4.02□□□□□ -1.77
UBA52P62987 MRPS33P2-201ENST00000507850 322 ntBASIC4.02□□□□□ -1.77
UBA52P62987 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC4.02□□□□□ -1.77
UBA52P62987 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
UBA52P62987 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
UBA52P62987 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms