Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 AC100784.1-201ENST00000522790 310 ntBASIC4.67□□□□□ -1.66
SEC61A1P61619 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC4.67□□□□□ -1.66
SEC61A1P61619 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC4.67□□□□□ -1.66
SEC61A1P61619 OR7E128P-201ENST00000532736 1024 ntBASIC4.67□□□□□ -1.66
SEC61A1P61619 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC4.67□□□□□ -1.66
SEC61A1P61619 SMARCE1P3-201ENST00000553649 1231 ntBASIC4.67□□□□□ -1.66
SEC61A1P61619 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC4.67□□□□□ -1.66
SEC61A1P61619 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC4.67□□□□□ -1.66
SEC61A1P61619 AC007225.2-201ENST00000562529 256 ntBASIC4.67□□□□□ -1.66
SEC61A1P61619 AC233702.9-201ENST00000581528 203 ntBASIC4.67□□□□□ -1.66
SEC61A1P61619 MIR3176-201ENST00000582210 90 ntBASIC4.67□□□□□ -1.66
SEC61A1P61619 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC4.67□□□□□ -1.66
SEC61A1P61619 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC4.67□□□□□ -1.66
SEC61A1P61619 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC4.67□□□□□ -1.66
SEC61A1P61619 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC4.67□□□□□ -1.66
SEC61A1P61619 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC4.67□□□□□ -1.66
SEC61A1P61619 AC021171.1-201ENST00000603137 706 ntBASIC4.67□□□□□ -1.66
SEC61A1P61619 AL353778.1-201ENST00000603149 408 ntBASIC4.67□□□□□ -1.66
SEC61A1P61619 AL359513.1-201ENST00000614364 557 ntBASIC4.67□□□□□ -1.66
SEC61A1P61619 AC007204.2-201ENST00000615022 616 ntBASIC4.67□□□□□ -1.66
SEC61A1P61619 AP004607.9-201ENST00000618202 316 ntBASIC4.67□□□□□ -1.66
SEC61A1P61619 AC078883.4-201ENST00000623218 367 ntBASIC4.67□□□□□ -1.66
SEC61A1P61619 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC4.67□□□□□ -1.66
SEC61A1P61619 CGA-206ENST00000630630 832 ntTSL 2 BASIC4.67□□□□□ -1.66
SEC61A1P61619 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC4.67□□□□□ -1.66
SEC61A1P61619 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
SEC61A1P61619 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SEC61A1P61619 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SEC61A1P61619 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC4.67□□□□□ -1.66
SEC61A1P61619 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC4.67□□□□□ -1.66
SEC61A1P61619 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SEC61A1P61619 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC4.67□□□□□ -1.66
SEC61A1P61619 STX3-208ENST00000641815 3236 ntBASIC4.67□□□□□ -1.66
SEC61A1P61619 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.66□□□□□ -1.66
SEC61A1P61619 CASC19-248ENST00000641674 1356 ntBASIC4.66□□□□□ -1.66
SEC61A1P61619 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
SEC61A1P61619 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC4.66□□□□□ -1.66
SEC61A1P61619 MT-RNR2-201ENST00000387347 1559 ntBASIC4.66□□□□□ -1.66
SEC61A1P61619 AC019072.1-201ENST00000604535 1551 ntBASIC4.66□□□□□ -1.66
SEC61A1P61619 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
SEC61A1P61619 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC4.66□□□□□ -1.66
SEC61A1P61619 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC4.66□□□□□ -1.66
SEC61A1P61619 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
SEC61A1P61619 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SEC61A1P61619 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC4.66□□□□□ -1.66
SEC61A1P61619 RN7SKP162-201ENST00000363605 345 ntBASIC4.66□□□□□ -1.66
SEC61A1P61619 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SEC61A1P61619 CD2-201ENST00000369477 478 ntTSL 2 BASIC4.66□□□□□ -1.66
SEC61A1P61619 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
SEC61A1P61619 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC4.66□□□□□ -1.66
SEC61A1P61619 SNORD56.6-201ENST00000384569 71 ntBASIC4.66□□□□□ -1.66
SEC61A1P61619 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SEC61A1P61619 AL009179.1-201ENST00000406085 265 ntBASIC4.66□□□□□ -1.66
SEC61A1P61619 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC4.66□□□□□ -1.66
SEC61A1P61619 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC4.66□□□□□ -1.66
SEC61A1P61619 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
SEC61A1P61619 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC4.66□□□□□ -1.66
SEC61A1P61619 RPL35AP24-201ENST00000413846 330 ntBASIC4.66□□□□□ -1.66
SEC61A1P61619 RPS24P7-201ENST00000416921 246 ntBASIC4.66□□□□□ -1.66
SEC61A1P61619 OR6C64P-201ENST00000419708 825 ntBASIC4.66□□□□□ -1.66
SEC61A1P61619 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC4.66□□□□□ -1.66
SEC61A1P61619 RPS6P15-201ENST00000431996 751 ntBASIC4.66□□□□□ -1.66
SEC61A1P61619 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC4.66□□□□□ -1.66
SEC61A1P61619 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC4.66□□□□□ -1.66
SEC61A1P61619 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
SEC61A1P61619 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC4.66□□□□□ -1.66
SEC61A1P61619 HSPE1P22-201ENST00000456856 327 ntBASIC4.66□□□□□ -1.66
SEC61A1P61619 RPS20P4-201ENST00000461659 355 ntBASIC4.66□□□□□ -1.66
SEC61A1P61619 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC4.66□□□□□ -1.66
SEC61A1P61619 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC4.66□□□□□ -1.66
SEC61A1P61619 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC4.66□□□□□ -1.66
SEC61A1P61619 NRBF2P4-201ENST00000520874 850 ntBASIC4.66□□□□□ -1.66
SEC61A1P61619 IGKV2-18-201ENST00000522607 343 ntBASIC4.66□□□□□ -1.66
SEC61A1P61619 AC135279.1-201ENST00000543493 504 ntBASIC4.66□□□□□ -1.66
SEC61A1P61619 AP003717.3-201ENST00000544832 1180 ntBASIC4.66□□□□□ -1.66
SEC61A1P61619 AC008126.1-201ENST00000549019 480 ntBASIC4.66□□□□□ -1.66
SEC61A1P61619 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC4.66□□□□□ -1.66
SEC61A1P61619 SETP1-201ENST00000556014 845 ntBASIC4.66□□□□□ -1.66
SEC61A1P61619 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC4.66□□□□□ -1.66
SEC61A1P61619 RN7SL435P-201ENST00000584418 282 ntBASIC4.66□□□□□ -1.66
SEC61A1P61619 CCDC58P3-201ENST00000590792 430 ntBASIC4.66□□□□□ -1.66
SEC61A1P61619 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC4.66□□□□□ -1.66
SEC61A1P61619 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC4.66□□□□□ -1.66
SEC61A1P61619 AC079610.2-201ENST00000604818 690 ntBASIC4.66□□□□□ -1.66
SEC61A1P61619 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC4.66□□□□□ -1.66
SEC61A1P61619 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC4.66□□□□□ -1.66
SEC61A1P61619 AC011815.3-201ENST00000624194 473 ntBASIC4.66□□□□□ -1.66
SEC61A1P61619 AC079416.3-201ENST00000624479 549 ntBASIC4.66□□□□□ -1.66
SEC61A1P61619 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC4.66□□□□□ -1.66
SEC61A1P61619 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC4.66□□□□□ -1.66
SEC61A1P61619 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.66□□□□□ -1.66
SEC61A1P61619 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
SEC61A1P61619 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
SEC61A1P61619 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SEC61A1P61619 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SEC61A1P61619 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
SEC61A1P61619 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
SEC61A1P61619 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.66
SEC61A1P61619 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
SEC61A1P61619 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms