Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 AC100770.1-201ENST00000532310 322 ntBASIC4.07□□□□□ -1.76
ACTBP60709 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
ACTBP60709 OR11J2P-201ENST00000555298 907 ntBASIC4.07□□□□□ -1.76
ACTBP60709 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC4.07□□□□□ -1.76
ACTBP60709 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC4.07□□□□□ -1.76
ACTBP60709 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
ACTBP60709 AC015912.2-201ENST00000571053 181 ntBASIC4.07□□□□□ -1.76
ACTBP60709 MTND6P33-201ENST00000571794 183 ntBASIC4.07□□□□□ -1.76
ACTBP60709 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC4.07□□□□□ -1.76
ACTBP60709 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.07□□□□□ -1.76
ACTBP60709 AL121873.1-201ENST00000616013 524 ntBASIC4.07□□□□□ -1.76
ACTBP60709 AL035461.2-201ENST00000619201 524 ntBASIC4.07□□□□□ -1.76
ACTBP60709 AL353662.3-201ENST00000625131 237 ntBASIC4.07□□□□□ -1.76
ACTBP60709 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC4.07□□□□□ -1.76
ACTBP60709 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
ACTBP60709 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.07□□□□□ -1.76
ACTBP60709 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC4.07□□□□□ -1.76
ACTBP60709 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.07□□□□□ -1.76
ACTBP60709 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC4.07□□□□□ -1.76
ACTBP60709 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.06□□□□□ -1.76
ACTBP60709 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
ACTBP60709 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
ACTBP60709 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
ACTBP60709 RN7SKP44-201ENST00000363602 316 ntBASIC4.06□□□□□ -1.76
ACTBP60709 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
ACTBP60709 AL357515.1-201ENST00000402967 542 ntBASIC4.06□□□□□ -1.76
ACTBP60709 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.06□□□□□ -1.76
ACTBP60709 AC096644.3-201ENST00000416788 338 ntBASIC4.06□□□□□ -1.76
ACTBP60709 RPS6P12-201ENST00000432491 726 ntBASIC4.06□□□□□ -1.76
ACTBP60709 AC011753.3-201ENST00000443436 406 ntBASIC4.06□□□□□ -1.76
ACTBP60709 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC4.06□□□□□ -1.76
ACTBP60709 AC110749.1-201ENST00000462007 357 ntBASIC4.06□□□□□ -1.76
ACTBP60709 RN7SL97P-201ENST00000486780 299 ntBASIC4.06□□□□□ -1.76
ACTBP60709 RN7SL629P-201ENST00000489622 285 ntBASIC4.06□□□□□ -1.76
ACTBP60709 RPS4XP14-201ENST00000493072 781 ntBASIC4.06□□□□□ -1.76
ACTBP60709 SNORD116-26-201ENST00000516006 96 ntBASIC4.06□□□□□ -1.76
ACTBP60709 RNA5SP92-201ENST00000516437 110 ntBASIC4.06□□□□□ -1.76
ACTBP60709 RNA5SP34-201ENST00000516887 130 ntBASIC4.06□□□□□ -1.76
ACTBP60709 AC090151.1-201ENST00000520784 730 ntBASIC4.06□□□□□ -1.76
ACTBP60709 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC4.06□□□□□ -1.76
ACTBP60709 IGHVIII-67-4-201ENST00000524281 296 ntBASIC4.06□□□□□ -1.76
ACTBP60709 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC4.06□□□□□ -1.76
ACTBP60709 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC4.06□□□□□ -1.76
ACTBP60709 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC4.06□□□□□ -1.76
ACTBP60709 AP000919.1-201ENST00000582850 985 ntBASIC4.06□□□□□ -1.76
ACTBP60709 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.06□□□□□ -1.76
ACTBP60709 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC4.06□□□□□ -1.76
ACTBP60709 AC105254.2-201ENST00000603636 436 ntBASIC4.06□□□□□ -1.76
ACTBP60709 AC008966.2-201ENST00000606157 453 ntBASIC4.06□□□□□ -1.76
ACTBP60709 AL121612.2-201ENST00000612261 482 ntBASIC4.06□□□□□ -1.76
ACTBP60709 AL356274.1-201ENST00000617064 410 ntBASIC4.06□□□□□ -1.76
ACTBP60709 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
ACTBP60709 AL669942.2-201ENST00000620352 697 ntBASIC4.06□□□□□ -1.76
ACTBP60709 MIR7154-201ENST00000620673 73 ntBASIC4.06□□□□□ -1.76
ACTBP60709 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC4.06□□□□□ -1.76
ACTBP60709 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
ACTBP60709 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
ACTBP60709 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
ACTBP60709 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.06□□□□□ -1.76
ACTBP60709 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
ACTBP60709 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
ACTBP60709 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.06□□□□□ -1.76
ACTBP60709 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.06□□□□□ -1.76
ACTBP60709 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.06□□□□□ -1.76
ACTBP60709 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
ACTBP60709 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.06□□□□□ -1.76
ACTBP60709 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
ACTBP60709 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
ACTBP60709 ARHGAP42P1-201ENST00000507474 1976 ntBASIC4.05□□□□□ -1.76
ACTBP60709 KPNA2P2-201ENST00000419546 1489 ntBASIC4.05□□□□□ -1.76
ACTBP60709 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
ACTBP60709 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.05□□□□□ -1.76
ACTBP60709 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
ACTBP60709 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
ACTBP60709 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
ACTBP60709 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.05□□□□□ -1.76
ACTBP60709 RPL23P2-201ENST00000320371 421 ntBASIC4.05□□□□□ -1.76
ACTBP60709 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
ACTBP60709 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
ACTBP60709 Z97832.1-201ENST00000402490 328 ntBASIC4.05□□□□□ -1.76
ACTBP60709 ARL4AP5-201ENST00000404372 599 ntBASIC4.05□□□□□ -1.76
ACTBP60709 AL603766.1-201ENST00000407763 664 ntBASIC4.05□□□□□ -1.76
ACTBP60709 RNA5SP345-201ENST00000410646 108 ntBASIC4.05□□□□□ -1.76
ACTBP60709 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC4.05□□□□□ -1.76
ACTBP60709 TBCAP2-201ENST00000416175 326 ntBASIC4.05□□□□□ -1.76
ACTBP60709 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.05□□□□□ -1.76
ACTBP60709 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC4.05□□□□□ -1.76
ACTBP60709 PRPF38AP2-201ENST00000438179 851 ntBASIC4.05□□□□□ -1.76
ACTBP60709 SUMO2P1-206ENST00000445436 284 ntBASIC4.05□□□□□ -1.76
ACTBP60709 EIF2S2P4-201ENST00000461070 984 ntBASIC4.05□□□□□ -1.76
ACTBP60709 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC4.05□□□□□ -1.76
ACTBP60709 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC4.05□□□□□ -1.76
ACTBP60709 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
ACTBP60709 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC4.05□□□□□ -1.76
ACTBP60709 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC4.05□□□□□ -1.76
ACTBP60709 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC4.05□□□□□ -1.76
ACTBP60709 RNU2-30P-201ENST00000516209 141 ntBASIC4.05□□□□□ -1.76
ACTBP60709 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.05□□□□□ -1.76
ACTBP60709 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC4.05□□□□□ -1.76
ACTBP60709 AC090281.1-201ENST00000523019 276 ntBASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 91.4 ms