Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
HMGCS2P54868 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
HMGCS2P54868 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC5.2□□□□□ -1.58
HMGCS2P54868 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC5.2□□□□□ -1.58
HMGCS2P54868 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
HMGCS2P54868 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.2□□□□□ -1.58
HMGCS2P54868 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
HMGCS2P54868 NAMPTP1-201ENST00000440465 2514 ntBASIC5.2□□□□□ -1.58
HMGCS2P54868 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.2□□□□□ -1.58
HMGCS2P54868 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.2□□□□□ -1.58
HMGCS2P54868 SNORA48.7-201ENST00000391302 135 ntBASIC5.2□□□□□ -1.58
HMGCS2P54868 AL080315.1-201ENST00000406055 466 ntBASIC5.2□□□□□ -1.58
HMGCS2P54868 CKS1BP6-201ENST00000424932 240 ntBASIC5.2□□□□□ -1.58
HMGCS2P54868 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC5.2□□□□□ -1.58
HMGCS2P54868 RPL7P33-201ENST00000444159 742 ntBASIC5.2□□□□□ -1.58
HMGCS2P54868 RPS27AP17-201ENST00000463344 455 ntBASIC5.2□□□□□ -1.58
HMGCS2P54868 RPS7P7-201ENST00000463499 571 ntBASIC5.2□□□□□ -1.58
HMGCS2P54868 RNA5SP249-201ENST00000516127 99 ntBASIC5.2□□□□□ -1.58
HMGCS2P54868 IGKV3OR22-2-201ENST00000517943 313 ntBASIC5.2□□□□□ -1.58
HMGCS2P54868 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC5.2□□□□□ -1.58
HMGCS2P54868 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC5.2□□□□□ -1.58
HMGCS2P54868 AL392048.1-201ENST00000613946 534 ntBASIC5.2□□□□□ -1.58
HMGCS2P54868 TEX41-256ENST00000626411 368 ntTSL 5 BASIC5.2□□□□□ -1.58
HMGCS2P54868 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC5.2□□□□□ -1.58
HMGCS2P54868 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC5.2□□□□□ -1.58
HMGCS2P54868 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
HMGCS2P54868 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
HMGCS2P54868 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC5.2□□□□□ -1.58
HMGCS2P54868 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.19□□□□□ -1.58
HMGCS2P54868 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
HMGCS2P54868 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
HMGCS2P54868 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
HMGCS2P54868 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
HMGCS2P54868 AC093909.5-201ENST00000621839 1799 ntBASIC5.19□□□□□ -1.58
HMGCS2P54868 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.19□□□□□ -1.58
HMGCS2P54868 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC5.19□□□□□ -1.58
HMGCS2P54868 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.19□□□□□ -1.58
HMGCS2P54868 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
HMGCS2P54868 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC5.19□□□□□ -1.58
HMGCS2P54868 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
HMGCS2P54868 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.19□□□□□ -1.58
HMGCS2P54868 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.19□□□□□ -1.58
HMGCS2P54868 PROS2P-201ENST00000474651 1951 ntBASIC5.19□□□□□ -1.58
HMGCS2P54868 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.19□□□□□ -1.58
HMGCS2P54868 AC017079.1-201ENST00000333650 415 ntBASIC5.19□□□□□ -1.58
HMGCS2P54868 UBBP2-201ENST00000376781 231 ntBASIC5.19□□□□□ -1.58
HMGCS2P54868 RPL32P23-201ENST00000397237 405 ntBASIC5.19□□□□□ -1.58
HMGCS2P54868 AL022722.2-201ENST00000402519 180 ntBASIC5.19□□□□□ -1.58
HMGCS2P54868 RPL23AP38-201ENST00000423801 469 ntBASIC5.19□□□□□ -1.58
HMGCS2P54868 MTCO3P17-201ENST00000443775 513 ntBASIC5.19□□□□□ -1.58
HMGCS2P54868 BTF3P6-201ENST00000448054 499 ntBASIC5.19□□□□□ -1.58
HMGCS2P54868 RHEBP2-201ENST00000450289 600 ntBASIC5.19□□□□□ -1.58
HMGCS2P54868 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC5.19□□□□□ -1.58
HMGCS2P54868 AC104849.1-201ENST00000462623 405 ntBASIC5.19□□□□□ -1.58
HMGCS2P54868 RN7SKP5-201ENST00000517045 272 ntBASIC5.19□□□□□ -1.58
HMGCS2P54868 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC5.19□□□□□ -1.58
HMGCS2P54868 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC5.19□□□□□ -1.58
HMGCS2P54868 SNX18P1Y-201ENST00000616231 511 ntBASIC5.19□□□□□ -1.58
HMGCS2P54868 uc_338.13-201ENST00000618243 179 ntBASIC5.19□□□□□ -1.58
HMGCS2P54868 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC5.19□□□□□ -1.58
HMGCS2P54868 MIR492-201ENST00000638676 116 ntBASIC5.19□□□□□ -1.58
HMGCS2P54868 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
HMGCS2P54868 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
HMGCS2P54868 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
HMGCS2P54868 AC100778.3-201ENST00000580060 1750 ntBASIC5.19□□□□□ -1.58
HMGCS2P54868 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
HMGCS2P54868 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
HMGCS2P54868 ASNSP1-204ENST00000641977 1664 ntBASIC5.18□□□□□ -1.58
HMGCS2P54868 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
HMGCS2P54868 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
HMGCS2P54868 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC5.18□□□□□ -1.58
HMGCS2P54868 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC5.18□□□□□ -1.58
HMGCS2P54868 AC005005.4-201ENST00000623789 16698 ntBASIC5.18□□□□□ -1.58
HMGCS2P54868 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
HMGCS2P54868 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
HMGCS2P54868 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.18□□□□□ -1.58
HMGCS2P54868 CASC19-206ENST00000641028 1430 ntBASIC5.18□□□□□ -1.58
HMGCS2P54868 SMG1P4-204ENST00000523028 4131 ntBASIC5.18□□□□□ -1.58
HMGCS2P54868 SNORA5.1-201ENST00000384275 131 ntBASIC5.18□□□□□ -1.58
HMGCS2P54868 SNORA81-201ENST00000408493 178 ntBASIC5.18□□□□□ -1.58
HMGCS2P54868 NRBF2P2-201ENST00000413087 861 ntBASIC5.18□□□□□ -1.58
HMGCS2P54868 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC5.18□□□□□ -1.58
HMGCS2P54868 DPPA2P2-201ENST00000418220 897 ntBASIC5.18□□□□□ -1.58
HMGCS2P54868 TPTE2P1-204ENST00000435256 593 ntBASIC5.18□□□□□ -1.58
HMGCS2P54868 NPM1P48-201ENST00000436002 853 ntBASIC5.18□□□□□ -1.58
HMGCS2P54868 RPL23AP52-201ENST00000439311 478 ntBASIC5.18□□□□□ -1.58
HMGCS2P54868 VN1R96P-201ENST00000446052 858 ntBASIC5.18□□□□□ -1.58
HMGCS2P54868 EEF1A1P1-201ENST00000447052 739 ntBASIC5.18□□□□□ -1.58
HMGCS2P54868 AC104651.2-201ENST00000447549 528 ntBASIC5.18□□□□□ -1.58
HMGCS2P54868 AL359073.1-201ENST00000448036 403 ntBASIC5.18□□□□□ -1.58
HMGCS2P54868 AC012671.1-201ENST00000451912 203 ntBASIC5.18□□□□□ -1.58
HMGCS2P54868 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC5.18□□□□□ -1.58
HMGCS2P54868 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC5.18□□□□□ -1.58
HMGCS2P54868 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC5.18□□□□□ -1.58
HMGCS2P54868 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC5.18□□□□□ -1.58
HMGCS2P54868 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC5.18□□□□□ -1.58
HMGCS2P54868 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC5.18□□□□□ -1.58
HMGCS2P54868 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC5.18□□□□□ -1.58
HMGCS2P54868 ADAD1P2-201ENST00000588476 646 ntBASIC5.18□□□□□ -1.58
HMGCS2P54868 AC093227.2-201ENST00000589357 285 ntBASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms