Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 PTGS1-203ENST00000373698 4987 ntTSL 2 BASIC8.18□□□□□ -1.1
NUBP1P53384 MTMR10-201ENST00000435680 4961 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
NUBP1P53384 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC8.18□□□□□ -1.1
NUBP1P53384 SETD7-207ENST00000608958 5281 ntTSL 5 BASIC8.17□□□□□ -1.1
NUBP1P53384 KCNT2-201ENST00000294725 4409 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
NUBP1P53384 UNC5C-201ENST00000453304 9875 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
NUBP1P53384 CALCR-205ENST00000421592 3626 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
NUBP1P53384 IFT46-201ENST00000264020 1819 ntTSL 2 BASIC8.17□□□□□ -1.1
NUBP1P53384 LIPC-201ENST00000299022 2751 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
NUBP1P53384 BTK-210ENST00000621635 2767 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
NUBP1P53384 NEPRO-202ENST00000383675 4672 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
NUBP1P53384 CASK-208ENST00000442742 2800 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
NUBP1P53384 CEP97-206ENST00000494050 2870 ntAPPRIS ALT2 TSL 2 BASIC8.17□□□□□ -1.1
NUBP1P53384 GABRR1-207ENST00000621627 2857 ntTSL 5 BASIC8.17□□□□□ -1.1
NUBP1P53384 PFKFB1-202ENST00000375006 1929 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
NUBP1P53384 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC8.17□□□□□ -1.1
NUBP1P53384 NDUFS1-203ENST00000432169 2080 ntTSL 2 BASIC8.17□□□□□ -1.1
NUBP1P53384 RPGRIP1L-205ENST00000563746 4193 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
NUBP1P53384 ZNF791-202ENST00000446165 6412 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
NUBP1P53384 FOXM1-201ENST00000342628 3475 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
NUBP1P53384 SMC1B-202ENST00000404354 3636 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
NUBP1P53384 SLC22A2-201ENST00000366952 3737 ntTSL 5 BASIC8.17□□□□□ -1.1
NUBP1P53384 snoU2_19.2-201ENST00000363024 80 ntBASIC8.17□□□□□ -1.1
NUBP1P53384 SNORA51.7-201ENST00000384171 134 ntBASIC8.17□□□□□ -1.1
NUBP1P53384 PKMP3-201ENST00000405497 715 ntBASIC8.17□□□□□ -1.1
NUBP1P53384 SNORA11.3-201ENST00000408471 128 ntBASIC8.17□□□□□ -1.1
NUBP1P53384 GSTA10P-201ENST00000412182 576 ntBASIC8.17□□□□□ -1.1
NUBP1P53384 AP001048.1-201ENST00000436359 280 ntTSL 2 BASIC8.17□□□□□ -1.1
NUBP1P53384 AC007064.2-201ENST00000442403 500 ntTSL 5 BASIC8.17□□□□□ -1.1
NUBP1P53384 EZR-AS1-201ENST00000451712 217 ntTSL 5 BASIC8.17□□□□□ -1.1
NUBP1P53384 AC091021.1-201ENST00000468051 388 ntBASIC8.17□□□□□ -1.1
NUBP1P53384 SSX8-201ENST00000506270 579 ntBASIC8.17□□□□□ -1.1
NUBP1P53384 AC074198.2-201ENST00000508153 258 ntBASIC8.17□□□□□ -1.1
NUBP1P53384 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC8.17□□□□□ -1.1
NUBP1P53384 AC093664.1-201ENST00000511779 289 ntBASIC8.17□□□□□ -1.1
NUBP1P53384 RNU6-313P-201ENST00000516317 112 ntBASIC8.17□□□□□ -1.1
NUBP1P53384 AC087277.1-201ENST00000529910 535 ntTSL 3 BASIC8.17□□□□□ -1.1
NUBP1P53384 AC072026.1-201ENST00000605023 201 ntBASIC8.17□□□□□ -1.1
NUBP1P53384 SNORA11.6-201ENST00000619030 128 ntBASIC8.17□□□□□ -1.1
NUBP1P53384 Metazoa_SRP.146-201ENST00000619409 286 ntBASIC8.17□□□□□ -1.1
NUBP1P53384 AC073592.6-201ENST00000624271 415 ntBASIC8.17□□□□□ -1.1
NUBP1P53384 PCBP1-AS1-322ENST00000628147 553 ntTSL 5 BASIC8.17□□□□□ -1.1
NUBP1P53384 AC004014.2-201ENST00000623718 5122 ntBASIC8.17□□□□□ -1.1
NUBP1P53384 ASH2L-202ENST00000428278 2678 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
NUBP1P53384 ZMYND8-204ENST00000355972 5542 ntAPPRIS ALT2 TSL 2 BASIC8.17□□□□□ -1.1
NUBP1P53384 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC8.17□□□□□ -1.1
NUBP1P53384 SCMH1-205ENST00000372595 3231 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
NUBP1P53384 EIF4BP6-201ENST00000431936 1828 ntBASIC8.17□□□□□ -1.1
NUBP1P53384 RNF152-201ENST00000312828 9501 ntAPPRIS P1 TSL 2 BASIC8.17□□□□□ -1.1
NUBP1P53384 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
NUBP1P53384 DNAJC27-AS1-205ENST00000434897 4660 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
NUBP1P53384 LINC02044-201ENST00000490139 2502 ntTSL 2 BASIC8.17□□□□□ -1.1
NUBP1P53384 BCL9P1-201ENST00000506012 2561 ntBASIC8.16□□□□□ -1.1
NUBP1P53384 SLC15A1-202ENST00000376503 3106 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
NUBP1P53384 ASXL2-202ENST00000404843 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
NUBP1P53384 CREB3L2-207ENST00000616381 7133 ntTSL 5 BASIC8.16□□□□□ -1.1
NUBP1P53384 CERS3-201ENST00000284382 3894 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
NUBP1P53384 COL28A1-201ENST00000399429 4277 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
NUBP1P53384 DCAF1-203ENST00000504652 5951 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
NUBP1P53384 MINDY3-201ENST00000277632 2381 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
NUBP1P53384 NAA11-201ENST00000286794 2014 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
NUBP1P53384 DEFB4A-201ENST00000302247 380 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
NUBP1P53384 AC138393.1-203ENST00000327086 343 ntBASIC8.16□□□□□ -1.1
NUBP1P53384 THSD4-203ENST00000357769 3403 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
NUBP1P53384 CD46-206ENST00000360212 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
NUBP1P53384 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
NUBP1P53384 RN7SKP130-201ENST00000364924 301 ntBASIC8.16□□□□□ -1.1
NUBP1P53384 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC8.16□□□□□ -1.1
NUBP1P53384 TIMM8AP1-201ENST00000419283 295 ntBASIC8.16□□□□□ -1.1
NUBP1P53384 BX842559.1-201ENST00000419615 532 ntBASIC8.16□□□□□ -1.1
NUBP1P53384 AC113607.1-201ENST00000427019 589 ntTSL 4 BASIC8.16□□□□□ -1.1
NUBP1P53384 AC009362.1-201ENST00000427253 406 ntBASIC8.16□□□□□ -1.1
NUBP1P53384 AC003958.2-202ENST00000432258 3890 ntTSL 2 BASIC8.16□□□□□ -1.1
NUBP1P53384 AL356121.1-201ENST00000442911 156 ntBASIC8.16□□□□□ -1.1
NUBP1P53384 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC8.16□□□□□ -1.1
NUBP1P53384 AL021937.4-201ENST00000444848 444 ntTSL 3 BASIC8.16□□□□□ -1.1
NUBP1P53384 NOP56P2-201ENST00000447491 769 ntBASIC8.16□□□□□ -1.1
NUBP1P53384 AL353691.1-201ENST00000451332 387 ntBASIC8.16□□□□□ -1.1
NUBP1P53384 AL139805.2-201ENST00000455305 2433 ntBASIC8.16□□□□□ -1.1
NUBP1P53384 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC8.16□□□□□ -1.1
NUBP1P53384 SNORA81.1-201ENST00000458922 177 ntBASIC8.16□□□□□ -1.1
NUBP1P53384 AL049830.2-201ENST00000480072 201 ntBASIC8.16□□□□□ -1.1
NUBP1P53384 LIN9-205ENST00000481685 1916 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
NUBP1P53384 AKIRIN2P1-201ENST00000505898 352 ntBASIC8.16□□□□□ -1.1
NUBP1P53384 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC8.16□□□□□ -1.1
NUBP1P53384 NDUFB4P9-201ENST00000511646 388 ntBASIC8.16□□□□□ -1.1
NUBP1P53384 Y_RNA.662-201ENST00000516028 97 ntBASIC8.16□□□□□ -1.1
NUBP1P53384 ENY2-211ENST00000521688 2922 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
NUBP1P53384 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC8.16□□□□□ -1.1
NUBP1P53384 AMZ2P1-203ENST00000565833 850 ntBASIC8.16□□□□□ -1.1
NUBP1P53384 AC134312.6-201ENST00000568587 444 ntTSL 5 BASIC8.16□□□□□ -1.1
NUBP1P53384 AC092121.1-201ENST00000569452 202 ntBASIC8.16□□□□□ -1.1
NUBP1P53384 AC020908.2-201ENST00000595134 405 ntTSL 2 BASIC8.16□□□□□ -1.1
NUBP1P53384 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
NUBP1P53384 AL021918.1-201ENST00000603933 236 ntBASIC8.16□□□□□ -1.1
NUBP1P53384 AC005344.1-201ENST00000613391 459 ntBASIC8.16□□□□□ -1.1
NUBP1P53384 SEM1-224ENST00000623693 729 ntTSL 5 BASIC8.16□□□□□ -1.1
NUBP1P53384 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC8.16□□□□□ -1.1
NUBP1P53384 MAPK10-252ENST00000640970 2620 ntTSL 5 BASIC8.16□□□□□ -1.1
NUBP1P53384 AF228730.7-203ENST00000641436 1804 ntBASIC8.16□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms