Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 LDHA-225ENST00000625635 141 ntTSL 5 BASIC5.31□□□□□ -1.56
CLCN3P51790 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CLCN3P51790 AL592494.2-201ENST00000425455 1548 ntBASIC5.31□□□□□ -1.56
CLCN3P51790 ZNF90P1-201ENST00000480493 1951 ntBASIC5.31□□□□□ -1.56
CLCN3P51790 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CLCN3P51790 RBPJP2-201ENST00000618187 1444 ntBASIC5.31□□□□□ -1.56
CLCN3P51790 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CLCN3P51790 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CLCN3P51790 TLK1P1-201ENST00000456760 2440 ntBASIC5.31□□□□□ -1.56
CLCN3P51790 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.3□□□□□ -1.56
CLCN3P51790 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CLCN3P51790 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC5.3□□□□□ -1.56
CLCN3P51790 AL442639.1-201ENST00000625030 1899 ntBASIC5.3□□□□□ -1.56
CLCN3P51790 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
CLCN3P51790 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.3□□□□□ -1.56
CLCN3P51790 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
CLCN3P51790 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
CLCN3P51790 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CLCN3P51790 RNU6-792P-201ENST00000363490 107 ntBASIC5.3□□□□□ -1.56
CLCN3P51790 MT-TP-201ENST00000387461 68 ntBASIC5.3□□□□□ -1.56
CLCN3P51790 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
CLCN3P51790 RNU1-82P-201ENST00000390851 165 ntBASIC5.3□□□□□ -1.56
CLCN3P51790 TAF9BP2-201ENST00000400856 499 ntBASIC5.3□□□□□ -1.56
CLCN3P51790 RPS4XP9-201ENST00000405151 780 ntBASIC5.3□□□□□ -1.56
CLCN3P51790 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC5.3□□□□□ -1.56
CLCN3P51790 AC006065.1-201ENST00000422539 802 ntBASIC5.3□□□□□ -1.56
CLCN3P51790 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC5.3□□□□□ -1.56
CLCN3P51790 AC093716.1-201ENST00000435923 377 ntBASIC5.3□□□□□ -1.56
CLCN3P51790 CYCSP11-201ENST00000436426 315 ntBASIC5.3□□□□□ -1.56
CLCN3P51790 AC016831.4-201ENST00000438302 307 ntBASIC5.3□□□□□ -1.56
CLCN3P51790 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC5.3□□□□□ -1.56
CLCN3P51790 RN7SL517P-201ENST00000462240 305 ntBASIC5.3□□□□□ -1.56
CLCN3P51790 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC5.3□□□□□ -1.56
CLCN3P51790 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CLCN3P51790 RNU6-709P-201ENST00000517257 104 ntBASIC5.3□□□□□ -1.56
CLCN3P51790 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC5.3□□□□□ -1.56
CLCN3P51790 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC5.3□□□□□ -1.56
CLCN3P51790 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CLCN3P51790 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC5.3□□□□□ -1.56
CLCN3P51790 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC5.3□□□□□ -1.56
CLCN3P51790 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CLCN3P51790 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.3□□□□□ -1.56
CLCN3P51790 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC5.3□□□□□ -1.56
CLCN3P51790 AC006349.1-201ENST00000555526 235 ntBASIC5.3□□□□□ -1.56
CLCN3P51790 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC5.3□□□□□ -1.56
CLCN3P51790 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC5.3□□□□□ -1.56
CLCN3P51790 AGGF1P9-201ENST00000561884 913 ntBASIC5.3□□□□□ -1.56
CLCN3P51790 RN7SL690P-201ENST00000582087 240 ntBASIC5.3□□□□□ -1.56
CLCN3P51790 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC5.3□□□□□ -1.56
CLCN3P51790 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC5.3□□□□□ -1.56
CLCN3P51790 AC084373.1-201ENST00000603311 235 ntBASIC5.3□□□□□ -1.56
CLCN3P51790 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
CLCN3P51790 AC023510.2-201ENST00000622162 746 ntBASIC5.3□□□□□ -1.56
CLCN3P51790 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC5.3□□□□□ -1.56
CLCN3P51790 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC5.3□□□□□ -1.56
CLCN3P51790 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CLCN3P51790 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
CLCN3P51790 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC5.3□□□□□ -1.56
CLCN3P51790 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC5.29□□□□□ -1.56
CLCN3P51790 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC5.29□□□□□ -1.56
CLCN3P51790 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CLCN3P51790 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC5.29□□□□□ -1.56
CLCN3P51790 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
CLCN3P51790 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CLCN3P51790 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CLCN3P51790 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CLCN3P51790 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CLCN3P51790 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
CLCN3P51790 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
CLCN3P51790 RNU1-32P-201ENST00000363937 159 ntBASIC5.29□□□□□ -1.56
CLCN3P51790 RNU6-1320P-201ENST00000390838 107 ntBASIC5.29□□□□□ -1.56
CLCN3P51790 RNU6-1269P-201ENST00000391139 107 ntBASIC5.29□□□□□ -1.56
CLCN3P51790 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CLCN3P51790 HMGN2P27-201ENST00000427352 270 ntBASIC5.29□□□□□ -1.56
CLCN3P51790 AC092162.1-201ENST00000432828 434 ntBASIC5.29□□□□□ -1.56
CLCN3P51790 ARAFP2-201ENST00000440565 559 ntBASIC5.29□□□□□ -1.56
CLCN3P51790 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC5.29□□□□□ -1.56
CLCN3P51790 MRPL35P2-201ENST00000448009 511 ntBASIC5.29□□□□□ -1.56
CLCN3P51790 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC5.29□□□□□ -1.56
CLCN3P51790 RPL23AP23-201ENST00000452590 471 ntBASIC5.29□□□□□ -1.56
CLCN3P51790 HNRNPDLP3-201ENST00000456745 380 ntBASIC5.29□□□□□ -1.56
CLCN3P51790 RNU6-599P-201ENST00000459383 107 ntBASIC5.29□□□□□ -1.56
CLCN3P51790 RNU6-1193P-201ENST00000459461 107 ntBASIC5.29□□□□□ -1.56
CLCN3P51790 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC5.29□□□□□ -1.56
CLCN3P51790 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC5.29□□□□□ -1.56
CLCN3P51790 NPM1P29-201ENST00000483112 803 ntBASIC5.29□□□□□ -1.56
CLCN3P51790 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC5.29□□□□□ -1.56
CLCN3P51790 AC111000.3-201ENST00000508057 576 ntBASIC5.29□□□□□ -1.56
CLCN3P51790 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC5.29□□□□□ -1.56
CLCN3P51790 ENPP7P9-201ENST00000514456 627 ntBASIC5.29□□□□□ -1.56
CLCN3P51790 IGHV3-63-201ENST00000518422 341 ntBASIC5.29□□□□□ -1.56
CLCN3P51790 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC5.29□□□□□ -1.56
CLCN3P51790 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC5.29□□□□□ -1.56
CLCN3P51790 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC5.29□□□□□ -1.56
CLCN3P51790 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
CLCN3P51790 AL110118.1-201ENST00000553543 400 ntBASIC5.29□□□□□ -1.56
CLCN3P51790 AC018552.1-201ENST00000562099 811 ntBASIC5.29□□□□□ -1.56
CLCN3P51790 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC5.29□□□□□ -1.56
CLCN3P51790 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC5.29□□□□□ -1.56
CLCN3P51790 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 149.6 ms