Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 AC025048.6-202ENST00000627667 438 ntBASIC6.81□□□□□ -1.32
USP11P51784 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC6.81□□□□□ -1.32
USP11P51784 AL591379.1-207ENST00000635982 261 ntBASIC6.81□□□□□ -1.32
USP11P51784 AMYH02020865.1-205ENST00000636189 261 ntBASIC6.81□□□□□ -1.32
USP11P51784 MIR1910-201ENST00000636955 80 ntBASIC6.81□□□□□ -1.32
USP11P51784 MTND5P26-201ENST00000426018 1752 ntBASIC6.81□□□□□ -1.32
USP11P51784 AP005901.5-201ENST00000545779 1796 ntBASIC6.81□□□□□ -1.32
USP11P51784 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC6.81□□□□□ -1.32
USP11P51784 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
USP11P51784 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
USP11P51784 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
USP11P51784 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC6.81□□□□□ -1.32
USP11P51784 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC6.81□□□□□ -1.32
USP11P51784 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC6.81□□□□□ -1.32
USP11P51784 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
USP11P51784 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
USP11P51784 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
USP11P51784 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC6.81□□□□□ -1.32
USP11P51784 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
USP11P51784 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC6.8□□□□□ -1.32
USP11P51784 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC6.8□□□□□ -1.32
USP11P51784 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC6.8□□□□□ -1.32
USP11P51784 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
USP11P51784 THAP12P9-201ENST00000503971 2360 ntBASIC6.8□□□□□ -1.32
USP11P51784 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
USP11P51784 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
USP11P51784 OR10J6P-201ENST00000289731 930 ntBASIC6.8□□□□□ -1.32
USP11P51784 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC6.8□□□□□ -1.32
USP11P51784 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
USP11P51784 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
USP11P51784 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
USP11P51784 RNU4-91P-201ENST00000364778 135 ntBASIC6.8□□□□□ -1.32
USP11P51784 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC6.8□□□□□ -1.32
USP11P51784 AC010385.1-201ENST00000412374 256 ntBASIC6.8□□□□□ -1.32
USP11P51784 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC6.8□□□□□ -1.32
USP11P51784 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC6.8□□□□□ -1.32
USP11P51784 AC115283.1-201ENST00000427353 400 ntBASIC6.8□□□□□ -1.32
USP11P51784 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC6.8□□□□□ -1.32
USP11P51784 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC6.8□□□□□ -1.32
USP11P51784 FTO-202ENST00000431610 707 ntTSL 3 BASIC6.8□□□□□ -1.32
USP11P51784 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC6.8□□□□□ -1.32
USP11P51784 MTCO3P18-201ENST00000440206 761 ntBASIC6.8□□□□□ -1.32
USP11P51784 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC6.8□□□□□ -1.32
USP11P51784 AL353898.1-201ENST00000444055 238 ntBASIC6.8□□□□□ -1.32
USP11P51784 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC6.8□□□□□ -1.32
USP11P51784 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC6.8□□□□□ -1.32
USP11P51784 NFU1P2-201ENST00000448700 469 ntBASIC6.8□□□□□ -1.32
USP11P51784 MTCO1P18-201ENST00000455518 1419 ntBASIC6.8□□□□□ -1.32
USP11P51784 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC6.8□□□□□ -1.32
USP11P51784 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC6.8□□□□□ -1.32
USP11P51784 OR9M1P-201ENST00000459641 921 ntBASIC6.8□□□□□ -1.32
USP11P51784 AC104164.1-201ENST00000460282 590 ntBASIC6.8□□□□□ -1.32
USP11P51784 AC023424.2-201ENST00000493479 777 ntBASIC6.8□□□□□ -1.32
USP11P51784 AC008628.2-201ENST00000502605 298 ntBASIC6.8□□□□□ -1.32
USP11P51784 MTND5P5-201ENST00000503764 376 ntBASIC6.8□□□□□ -1.32
USP11P51784 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC6.8□□□□□ -1.32
USP11P51784 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC6.8□□□□□ -1.32
USP11P51784 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC6.8□□□□□ -1.32
USP11P51784 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
USP11P51784 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC6.8□□□□□ -1.32
USP11P51784 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
USP11P51784 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC6.8□□□□□ -1.32
USP11P51784 DEFB108A-201ENST00000530110 222 ntBASIC6.8□□□□□ -1.32
USP11P51784 AL157700.1-201ENST00000561973 1432 ntBASIC6.8□□□□□ -1.32
USP11P51784 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC6.8□□□□□ -1.32
USP11P51784 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC6.8□□□□□ -1.32
USP11P51784 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC6.8□□□□□ -1.32
USP11P51784 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
USP11P51784 AC068790.7-201ENST00000602347 528 ntBASIC6.8□□□□□ -1.32
USP11P51784 AC112220.3-201ENST00000605502 502 ntBASIC6.8□□□□□ -1.32
USP11P51784 AL445222.1-201ENST00000607259 628 ntBASIC6.8□□□□□ -1.32
USP11P51784 MIR7844-201ENST00000616161 122 ntBASIC6.8□□□□□ -1.32
USP11P51784 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC6.8□□□□□ -1.32
USP11P51784 CDY11P-201ENST00000447168 1651 ntBASIC6.8□□□□□ -1.32
USP11P51784 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC6.8□□□□□ -1.32
USP11P51784 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
USP11P51784 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC6.8□□□□□ -1.32
USP11P51784 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC6.8□□□□□ -1.32
USP11P51784 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC6.8□□□□□ -1.32
USP11P51784 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
USP11P51784 KARSP1-201ENST00000451871 1752 ntBASIC6.8□□□□□ -1.32
USP11P51784 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC6.79□□□□□ -1.32
USP11P51784 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC6.79□□□□□ -1.32
USP11P51784 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC6.79□□□□□ -1.32
USP11P51784 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC6.79□□□□□ -1.32
USP11P51784 AC007159.1-201ENST00000566529 4706 ntBASIC6.79□□□□□ -1.32
USP11P51784 AF287957.1-201ENST00000607368 1595 ntBASIC6.79□□□□□ -1.32
USP11P51784 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC6.79□□□□□ -1.32
USP11P51784 OFD1P8Y-201ENST00000449148 1433 ntBASIC6.79□□□□□ -1.32
USP11P51784 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
USP11P51784 SELENOWP1-201ENST00000322792 252 ntBASIC6.79□□□□□ -1.32
USP11P51784 RNA5SP273-201ENST00000362484 113 ntBASIC6.79□□□□□ -1.32
USP11P51784 RNA5SP477-201ENST00000362639 119 ntBASIC6.79□□□□□ -1.32
USP11P51784 RNU6-253P-201ENST00000384730 105 ntBASIC6.79□□□□□ -1.32
USP11P51784 SNRPEP6-201ENST00000407465 277 ntBASIC6.79□□□□□ -1.32
USP11P51784 RN7SKP240-201ENST00000410583 375 ntBASIC6.79□□□□□ -1.32
USP11P51784 HMGB3P31-201ENST00000413333 595 ntBASIC6.79□□□□□ -1.32
USP11P51784 RPS7P13-201ENST00000413955 498 ntBASIC6.79□□□□□ -1.32
USP11P51784 USP9YP20-201ENST00000419224 558 ntBASIC6.79□□□□□ -1.32
USP11P51784 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC6.79□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms