Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 AC010300.1-201ENST00000600671 5134 ntBASIC4.53□□□□□ -1.68
RPA3P35244 SNORA71.2-201ENST00000364941 134 ntBASIC4.53□□□□□ -1.68
RPA3P35244 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
RPA3P35244 RNA5SP296-201ENST00000410523 111 ntBASIC4.53□□□□□ -1.68
RPA3P35244 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC4.53□□□□□ -1.68
RPA3P35244 AC140479.3-201ENST00000418944 1126 ntBASIC4.53□□□□□ -1.68
RPA3P35244 AC073335.1-201ENST00000427776 363 ntBASIC4.53□□□□□ -1.68
RPA3P35244 USP9YP9-201ENST00000429406 715 ntBASIC4.53□□□□□ -1.68
RPA3P35244 CYCSP11-201ENST00000436426 315 ntBASIC4.53□□□□□ -1.68
RPA3P35244 HLA-N-201ENST00000437516 135 ntBASIC4.53□□□□□ -1.68
RPA3P35244 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC4.53□□□□□ -1.68
RPA3P35244 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC4.53□□□□□ -1.68
RPA3P35244 AC010469.1-201ENST00000463864 576 ntBASIC4.53□□□□□ -1.68
RPA3P35244 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.53□□□□□ -1.68
RPA3P35244 RNU6-943P-201ENST00000516960 98 ntBASIC4.53□□□□□ -1.68
RPA3P35244 IGKV1-32-201ENST00000519290 311 ntBASIC4.53□□□□□ -1.68
RPA3P35244 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC4.53□□□□□ -1.68
RPA3P35244 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.53□□□□□ -1.68
RPA3P35244 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC4.53□□□□□ -1.68
RPA3P35244 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC4.53□□□□□ -1.68
RPA3P35244 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC4.53□□□□□ -1.68
RPA3P35244 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC4.53□□□□□ -1.68
RPA3P35244 BNIP3P32-201ENST00000600015 554 ntBASIC4.53□□□□□ -1.68
RPA3P35244 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC4.53□□□□□ -1.68
RPA3P35244 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC4.53□□□□□ -1.68
RPA3P35244 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.53□□□□□ -1.68
RPA3P35244 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
RPA3P35244 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
RPA3P35244 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
RPA3P35244 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.52□□□□□ -1.69
RPA3P35244 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC4.52□□□□□ -1.69
RPA3P35244 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
RPA3P35244 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.52□□□□□ -1.69
RPA3P35244 AC245100.2-201ENST00000454544 1679 ntBASIC4.52□□□□□ -1.69
RPA3P35244 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
RPA3P35244 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
RPA3P35244 RNU1-15P-201ENST00000353977 144 ntBASIC4.52□□□□□ -1.69
RPA3P35244 ATG4AP1-201ENST00000416893 538 ntBASIC4.52□□□□□ -1.69
RPA3P35244 UBTFL3-201ENST00000418934 1024 ntBASIC4.52□□□□□ -1.69
RPA3P35244 PTP4A1P1-201ENST00000420539 515 ntBASIC4.52□□□□□ -1.69
RPA3P35244 AC062016.2-201ENST00000420950 676 ntBASIC4.52□□□□□ -1.69
RPA3P35244 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC4.52□□□□□ -1.69
RPA3P35244 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC4.52□□□□□ -1.69
RPA3P35244 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC4.52□□□□□ -1.69
RPA3P35244 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.52□□□□□ -1.69
RPA3P35244 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC4.52□□□□□ -1.69
RPA3P35244 AC079804.1-201ENST00000461922 436 ntBASIC4.52□□□□□ -1.69
RPA3P35244 UBTFL6-201ENST00000477929 1024 ntBASIC4.52□□□□□ -1.69
RPA3P35244 AGGF1P3-201ENST00000493675 1213 ntBASIC4.52□□□□□ -1.69
RPA3P35244 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC4.52□□□□□ -1.69
RPA3P35244 AL671862.1-201ENST00000515851 349 ntBASIC4.52□□□□□ -1.69
RPA3P35244 RNA5SP154-201ENST00000516193 111 ntBASIC4.52□□□□□ -1.69
RPA3P35244 AC022882.1-201ENST00000532142 501 ntBASIC4.52□□□□□ -1.69
RPA3P35244 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC4.52□□□□□ -1.69
RPA3P35244 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC4.52□□□□□ -1.69
RPA3P35244 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.52□□□□□ -1.69
RPA3P35244 AC008536.1-201ENST00000602872 669 ntBASIC4.52□□□□□ -1.69
RPA3P35244 IGKV1OR2-9-201ENST00000603957 287 ntBASIC4.52□□□□□ -1.69
RPA3P35244 IGKV1OR2-11-201ENST00000604120 287 ntBASIC4.52□□□□□ -1.69
RPA3P35244 AL161616.1-201ENST00000611867 286 ntBASIC4.52□□□□□ -1.69
RPA3P35244 AC074140.1-201ENST00000621617 208 ntBASIC4.52□□□□□ -1.69
RPA3P35244 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC4.52□□□□□ -1.69
RPA3P35244 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
RPA3P35244 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC4.52□□□□□ -1.69
RPA3P35244 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
RPA3P35244 AC010928.1-201ENST00000592477 1447 ntBASIC4.52□□□□□ -1.69
RPA3P35244 AC016588.2-201ENST00000632484 3021 ntBASIC4.52□□□□□ -1.69
RPA3P35244 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
RPA3P35244 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
RPA3P35244 AC108467.2-201ENST00000617640 1597 ntBASIC4.52□□□□□ -1.69
RPA3P35244 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
RPA3P35244 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
RPA3P35244 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.52□□□□□ -1.69
RPA3P35244 MTCO1P15-201ENST00000529569 1526 ntBASIC4.51□□□□□ -1.69
RPA3P35244 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
RPA3P35244 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.51□□□□□ -1.69
RPA3P35244 ARHGAP42P1-201ENST00000507474 1976 ntBASIC4.51□□□□□ -1.69
RPA3P35244 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
RPA3P35244 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.51□□□□□ -1.69
RPA3P35244 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.51□□□□□ -1.69
RPA3P35244 AC139769.1-204ENST00000472297 1931 ntBASIC4.51□□□□□ -1.69
RPA3P35244 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC4.51□□□□□ -1.69
RPA3P35244 MIR448-201ENST00000362131 111 ntBASIC4.51□□□□□ -1.69
RPA3P35244 MIR513A2-201ENST00000385249 127 ntBASIC4.51□□□□□ -1.69
RPA3P35244 AL121834.1-202ENST00000404494 277 ntBASIC4.51□□□□□ -1.69
RPA3P35244 RNU2-50P-201ENST00000410494 143 ntBASIC4.51□□□□□ -1.69
RPA3P35244 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.51□□□□□ -1.69
RPA3P35244 RBMY2KP-201ENST00000418221 992 ntBASIC4.51□□□□□ -1.69
RPA3P35244 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC4.51□□□□□ -1.69
RPA3P35244 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC4.51□□□□□ -1.69
RPA3P35244 AC092905.1-201ENST00000467527 949 ntBASIC4.51□□□□□ -1.69
RPA3P35244 AC104763.1-201ENST00000475274 360 ntBASIC4.51□□□□□ -1.69
RPA3P35244 RPL36AP41-201ENST00000493820 306 ntBASIC4.51□□□□□ -1.69
RPA3P35244 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC4.51□□□□□ -1.69
RPA3P35244 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC4.51□□□□□ -1.69
RPA3P35244 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC4.51□□□□□ -1.69
RPA3P35244 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
RPA3P35244 AC008126.1-201ENST00000549019 480 ntBASIC4.51□□□□□ -1.69
RPA3P35244 AL358913.1-201ENST00000554342 121 ntBASIC4.51□□□□□ -1.69
RPA3P35244 CYP4A43P-201ENST00000568156 121 ntBASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms