Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC5.59□□□□□ -1.51
SLC6A4P31645 AL512329.2-201ENST00000607350 548 ntBASIC5.59□□□□□ -1.51
SLC6A4P31645 AP000255.1-201ENST00000610276 676 ntBASIC5.59□□□□□ -1.51
SLC6A4P31645 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
SLC6A4P31645 STMN1P1-201ENST00000617809 440 ntBASIC5.59□□□□□ -1.51
SLC6A4P31645 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
SLC6A4P31645 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
SLC6A4P31645 AC103706.2-201ENST00000638080 240 ntBASIC5.59□□□□□ -1.51
SLC6A4P31645 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
SLC6A4P31645 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC5.59□□□□□ -1.51
SLC6A4P31645 ZNF663P-202ENST00000641770 1131 ntBASIC5.59□□□□□ -1.51
SLC6A4P31645 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.59□□□□□ -1.51
SLC6A4P31645 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
SLC6A4P31645 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC5.59□□□□□ -1.52
SLC6A4P31645 UGT2B26P-201ENST00000508672 1613 ntBASIC5.59□□□□□ -1.52
SLC6A4P31645 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
SLC6A4P31645 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SLC6A4P31645 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SLC6A4P31645 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC5.58□□□□□ -1.52
SLC6A4P31645 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.58□□□□□ -1.52
SLC6A4P31645 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SLC6A4P31645 AC073429.2-201ENST00000569694 1444 ntBASIC5.58□□□□□ -1.52
SLC6A4P31645 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SLC6A4P31645 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SLC6A4P31645 NACA3P-201ENST00000359690 648 ntBASIC5.58□□□□□ -1.52
SLC6A4P31645 RNU6-666P-201ENST00000363499 107 ntBASIC5.58□□□□□ -1.52
SLC6A4P31645 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC5.58□□□□□ -1.52
SLC6A4P31645 RPS27AP11-201ENST00000402798 447 ntBASIC5.58□□□□□ -1.52
SLC6A4P31645 HMGB3P18-201ENST00000406327 590 ntBASIC5.58□□□□□ -1.52
SLC6A4P31645 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC5.58□□□□□ -1.52
SLC6A4P31645 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC5.58□□□□□ -1.52
SLC6A4P31645 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.58□□□□□ -1.52
SLC6A4P31645 AL354868.1-201ENST00000417077 482 ntBASIC5.58□□□□□ -1.52
SLC6A4P31645 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC5.58□□□□□ -1.52
SLC6A4P31645 AL365203.2-201ENST00000423444 196 ntBASIC5.58□□□□□ -1.52
SLC6A4P31645 NANOGP4-201ENST00000427230 913 ntBASIC5.58□□□□□ -1.52
SLC6A4P31645 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC5.58□□□□□ -1.52
SLC6A4P31645 REG1CP-206ENST00000447469 496 ntBASIC5.58□□□□□ -1.52
SLC6A4P31645 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SLC6A4P31645 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC5.58□□□□□ -1.52
SLC6A4P31645 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
SLC6A4P31645 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC5.58□□□□□ -1.52
SLC6A4P31645 RN7SL799P-201ENST00000475891 298 ntBASIC5.58□□□□□ -1.52
SLC6A4P31645 RN7SL447P-201ENST00000494711 245 ntBASIC5.58□□□□□ -1.52
SLC6A4P31645 AC008953.1-201ENST00000497334 318 ntBASIC5.58□□□□□ -1.52
SLC6A4P31645 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC5.58□□□□□ -1.52
SLC6A4P31645 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC5.58□□□□□ -1.52
SLC6A4P31645 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC5.58□□□□□ -1.52
SLC6A4P31645 AC104108.1-201ENST00000509930 412 ntBASIC5.58□□□□□ -1.52
SLC6A4P31645 MTHFD2P4-201ENST00000515074 1025 ntBASIC5.58□□□□□ -1.52
SLC6A4P31645 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC5.58□□□□□ -1.52
SLC6A4P31645 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC5.58□□□□□ -1.52
SLC6A4P31645 HMGB1P40-201ENST00000525121 540 ntBASIC5.58□□□□□ -1.52
SLC6A4P31645 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
SLC6A4P31645 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
SLC6A4P31645 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC5.58□□□□□ -1.52
SLC6A4P31645 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC5.58□□□□□ -1.52
SLC6A4P31645 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC5.58□□□□□ -1.52
SLC6A4P31645 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC5.58□□□□□ -1.52
SLC6A4P31645 RPL10P14-201ENST00000565265 298 ntBASIC5.58□□□□□ -1.52
SLC6A4P31645 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SLC6A4P31645 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC5.58□□□□□ -1.52
SLC6A4P31645 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC5.58□□□□□ -1.52
SLC6A4P31645 AC125494.3-201ENST00000602759 455 ntBASIC5.58□□□□□ -1.52
SLC6A4P31645 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC5.58□□□□□ -1.52
SLC6A4P31645 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC5.58□□□□□ -1.52
SLC6A4P31645 AL450489.1-201ENST00000612071 468 ntBASIC5.58□□□□□ -1.52
SLC6A4P31645 AC139769.3-201ENST00000618383 175 ntBASIC5.58□□□□□ -1.52
SLC6A4P31645 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC5.58□□□□□ -1.52
SLC6A4P31645 AC007342.8-201ENST00000623278 678 ntBASIC5.58□□□□□ -1.52
SLC6A4P31645 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SLC6A4P31645 AC007671.2-201ENST00000637344 619 ntBASIC5.58□□□□□ -1.52
SLC6A4P31645 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC5.58□□□□□ -1.52
SLC6A4P31645 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
SLC6A4P31645 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
SLC6A4P31645 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC5.58□□□□□ -1.52
SLC6A4P31645 AC092070.2-203ENST00000598377 3644 ntBASIC5.58□□□□□ -1.52
SLC6A4P31645 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
SLC6A4P31645 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SLC6A4P31645 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SLC6A4P31645 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SLC6A4P31645 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.58□□□□□ -1.52
SLC6A4P31645 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SLC6A4P31645 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
SLC6A4P31645 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SLC6A4P31645 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SLC6A4P31645 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.58□□□□□ -1.52
SLC6A4P31645 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC5.58□□□□□ -1.52
SLC6A4P31645 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SLC6A4P31645 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC5.57□□□□□ -1.52
SLC6A4P31645 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
SLC6A4P31645 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
SLC6A4P31645 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC5.57□□□□□ -1.52
SLC6A4P31645 AL121950.1-201ENST00000624993 2077 ntBASIC5.57□□□□□ -1.52
SLC6A4P31645 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC5.57□□□□□ -1.52
SLC6A4P31645 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC5.57□□□□□ -1.52
SLC6A4P31645 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SLC6A4P31645 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SLC6A4P31645 ENSAP3-201ENST00000312710 333 ntBASIC5.57□□□□□ -1.52
SLC6A4P31645 RNU1-19P-201ENST00000363306 165 ntBASIC5.57□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms