Protein–RNA interactions for Protein: P31277

HOXD11, Homeobox protein Hox-D11, humanhuman

Predicted RBP Predictions only

Length 338 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD11P31277 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC9.32□□□□□ -0.92
HOXD11P31277 NHLRC3-201ENST00000379599 3275 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
HOXD11P31277 RNA5SP197-201ENST00000363357 119 ntBASIC9.32□□□□□ -0.92
HOXD11P31277 SNORD83A-201ENST00000386747 95 ntBASIC9.32□□□□□ -0.92
HOXD11P31277 RNU6-1248P-201ENST00000391096 64 ntBASIC9.32□□□□□ -0.92
HOXD11P31277 RNU1-139P-201ENST00000391307 165 ntBASIC9.32□□□□□ -0.92
HOXD11P31277 AC096570.1-201ENST00000419013 569 ntTSL 4 BASIC9.32□□□□□ -0.92
HOXD11P31277 ATP5A1P8-201ENST00000423669 1291 ntBASIC9.32□□□□□ -0.92
HOXD11P31277 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC9.32□□□□□ -0.92
HOXD11P31277 AP000907.1-201ENST00000428428 510 ntBASIC9.32□□□□□ -0.92
HOXD11P31277 CD302-202ENST00000429078 3803 ntTSL 2 BASIC9.32□□□□□ -0.92
HOXD11P31277 LINC01883-201ENST00000457385 380 ntTSL 2 BASIC9.32□□□□□ -0.92
HOXD11P31277 RN7SL587P-201ENST00000459853 281 ntBASIC9.32□□□□□ -0.92
HOXD11P31277 AL136038.1-201ENST00000497246 351 ntBASIC9.32□□□□□ -0.92
HOXD11P31277 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC9.32□□□□□ -0.92
HOXD11P31277 AC107952.1-201ENST00000524200 376 ntBASIC9.32□□□□□ -0.92
HOXD11P31277 AC026826.3-201ENST00000561747 158 ntBASIC9.32□□□□□ -0.92
HOXD11P31277 TP53TG3HP-201ENST00000563487 346 ntBASIC9.32□□□□□ -0.92
HOXD11P31277 SRP68P1-201ENST00000584247 269 ntBASIC9.32□□□□□ -0.92
HOXD11P31277 BX640514.2-201ENST00000617730 625 ntTSL 3 BASIC9.32□□□□□ -0.92
HOXD11P31277 AL121890.5-201ENST00000620848 304 ntBASIC9.32□□□□□ -0.92
HOXD11P31277 PIPSL-201ENST00000480546 3350 ntBASIC9.32□□□□□ -0.92
HOXD11P31277 ALDH6A1-202ENST00000553458 5499 ntAPPRIS P3 TSL 1 (best) BASIC9.32□□□□□ -0.92
HOXD11P31277 PFKFB1-202ENST00000375006 1929 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
HOXD11P31277 WDR33-202ENST00000393006 3574 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
HOXD11P31277 NUP85-203ENST00000540768 1926 ntTSL 2 BASIC9.32□□□□□ -0.92
HOXD11P31277 PDE4B-207ENST00000480109 2037 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
HOXD11P31277 SLC24A4-201ENST00000393265 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
HOXD11P31277 AC037441.1-202ENST00000511897 3879 ntTSL 2 BASIC9.32□□□□□ -0.92
HOXD11P31277 ZNF630-201ENST00000276054 2791 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
HOXD11P31277 ZMYND8-218ENST00000540497 3405 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
HOXD11P31277 AC024610.2-204ENST00000637478 2867 ntTSL 5 BASIC9.32□□□□□ -0.92
HOXD11P31277 KCNK10-203ENST00000340700 7501 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
HOXD11P31277 GJB2-201ENST00000382844 2309 ntAPPRIS P1 BASIC9.32□□□□□ -0.92
HOXD11P31277 CD300LF-204ENST00000361254 1689 ntAPPRIS ALT2 TSL 5 BASIC9.32□□□□□ -0.92
HOXD11P31277 ZSCAN12P1-202ENST00000529104 1657 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
HOXD11P31277 DDX3X-217ENST00000629496 5023 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
HOXD11P31277 AHCYL1-201ENST00000359172 2503 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
HOXD11P31277 MAP1A-202ENST00000382031 10553 ntAPPRIS ALT2 TSL 5 BASIC9.32□□□□□ -0.92
HOXD11P31277 ADGRG6-203ENST00000367608 6879 ntAPPRIS ALT1 TSL 1 (best) BASIC9.32□□□□□ -0.92
HOXD11P31277 GIT2-205ENST00000457474 5291 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
HOXD11P31277 EPPK1-202ENST00000615648 16002 ntAPPRIS P2 TSL 5 BASIC9.32□□□□□ -0.92
HOXD11P31277 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC9.32□□□□□ -0.92
HOXD11P31277 AL109918.1-201ENST00000602367 3039 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
HOXD11P31277 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
HOXD11P31277 MYO10-203ENST00000505695 4803 ntTSL 2 BASIC9.31□□□□□ -0.92
HOXD11P31277 ATP6V1C2-202ENST00000381661 3102 ntAPPRIS P1 TSL 2 BASIC9.31□□□□□ -0.92
HOXD11P31277 CCR2-204ENST00000445132 2386 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
HOXD11P31277 SYNPR-204ENST00000460711 2383 ntTSL 2 BASIC9.31□□□□□ -0.92
HOXD11P31277 ADGRE1-204ENST00000381407 2687 ntTSL 2 BASIC9.31□□□□□ -0.92
HOXD11P31277 FAM83F-201ENST00000333407 15561 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
HOXD11P31277 MED23-209ENST00000539158 1636 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
HOXD11P31277 ZSWIM1-202ENST00000372523 2769 ntAPPRIS P1 TSL 2 BASIC9.31□□□□□ -0.92
HOXD11P31277 GLI1-207ENST00000543426 3394 ntTSL 5 BASIC9.31□□□□□ -0.92
HOXD11P31277 RNF111-202ENST00000557998 4803 ntTSL 2 BASIC9.31□□□□□ -0.92
HOXD11P31277 LCT-201ENST00000264162 6279 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
HOXD11P31277 C10orf126-201ENST00000375520 2149 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
HOXD11P31277 AL360294.1-201ENST00000640945 2438 ntBASIC9.31□□□□□ -0.92
HOXD11P31277 GRIA1-201ENST00000285900 5708 ntAPPRIS P3 TSL 1 (best) BASIC9.31□□□□□ -0.92
HOXD11P31277 DNAI1-201ENST00000242317 2504 ntAPPRIS P3 TSL 1 (best) BASIC9.31□□□□□ -0.92
HOXD11P31277 MTAP-201ENST00000380172 6122 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
HOXD11P31277 CAPN3-206ENST00000397163 3228 ntAPPRIS ALT1 TSL 1 (best) BASIC9.31□□□□□ -0.92
HOXD11P31277 RPRD2-203ENST00000401000 7605 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
HOXD11P31277 Y_RNA.294-201ENST00000364916 102 ntBASIC9.31□□□□□ -0.92
HOXD11P31277 RNU2-21P-201ENST00000410368 188 ntBASIC9.31□□□□□ -0.92
HOXD11P31277 RNU2-18P-201ENST00000411224 162 ntBASIC9.31□□□□□ -0.92
HOXD11P31277 AP001043.1-203ENST00000415824 407 ntTSL 5 BASIC9.31□□□□□ -0.92
HOXD11P31277 RPL34P19-201ENST00000415903 342 ntBASIC9.31□□□□□ -0.92
HOXD11P31277 EDDM3CP-201ENST00000415977 425 ntBASIC9.31□□□□□ -0.92
HOXD11P31277 RPL36P2-201ENST00000426026 315 ntBASIC9.31□□□□□ -0.92
HOXD11P31277 MRPL48P1-201ENST00000445390 636 ntBASIC9.31□□□□□ -0.92
HOXD11P31277 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC9.31□□□□□ -0.92
HOXD11P31277 AC009269.1-202ENST00000484381 469 ntBASIC9.31□□□□□ -0.92
HOXD11P31277 AC024451.1-201ENST00000508013 779 ntBASIC9.31□□□□□ -0.92
HOXD11P31277 AC068134.3-201ENST00000513620 788 ntBASIC9.31□□□□□ -0.92
HOXD11P31277 RNU6-27P-201ENST00000516146 107 ntBASIC9.31□□□□□ -0.92
HOXD11P31277 AC008694.2-201ENST00000517591 306 ntBASIC9.31□□□□□ -0.92
HOXD11P31277 AC103783.1-201ENST00000520506 373 ntBASIC9.31□□□□□ -0.92
HOXD11P31277 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC9.31□□□□□ -0.92
HOXD11P31277 STH-201ENST00000537309 445 ntAPPRIS P1 BASIC9.31□□□□□ -0.92
HOXD11P31277 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC9.31□□□□□ -0.92
HOXD11P31277 GNG2-215ENST00000557376 573 ntTSL 4 BASIC9.31□□□□□ -0.92
HOXD11P31277 MIR3145-201ENST00000580727 82 ntBASIC9.31□□□□□ -0.92
HOXD11P31277 AC015688.1-201ENST00000584894 199 ntBASIC9.31□□□□□ -0.92
HOXD11P31277 AL034351.1-201ENST00000605288 668 ntBASIC9.31□□□□□ -0.92
HOXD11P31277 AL355816.1-201ENST00000607951 118 ntBASIC9.31□□□□□ -0.92
HOXD11P31277 SLC25A15P4-201ENST00000614260 289 ntBASIC9.31□□□□□ -0.92
HOXD11P31277 AC087893.2-201ENST00000623272 255 ntBASIC9.31□□□□□ -0.92
HOXD11P31277 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC9.31□□□□□ -0.92
HOXD11P31277 MYO15A-201ENST00000205890 11863 ntAPPRIS P2 TSL 5 BASIC9.31□□□□□ -0.92
HOXD11P31277 MYO15A-217ENST00000615845 11860 ntAPPRIS ALT2 TSL 5 BASIC9.31□□□□□ -0.92
HOXD11P31277 DPYSL2-201ENST00000311151 4603 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
HOXD11P31277 ZNF691-208ENST00000630961 1581 ntTSL 3 BASIC9.31□□□□□ -0.92
HOXD11P31277 ZNF469-201ENST00000437464 13203 ntAPPRIS P2 TSL 5 BASIC9.31□□□□□ -0.92
HOXD11P31277 PROS2P-201ENST00000474651 1951 ntBASIC9.31□□□□□ -0.92
HOXD11P31277 LINC02466-201ENST00000500092 1963 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
HOXD11P31277 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
HOXD11P31277 AC027228.2-201ENST00000567141 2154 ntBASIC9.31□□□□□ -0.92
HOXD11P31277 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC9.31□□□□□ -0.92
HOXD11P31277 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC9.31□□□□□ -0.92
Retrieved 100 of 98,524 protein–RNA pairs in 94.3 ms