Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC5.25□□□□□ -1.57
HOXC13P31276 Z73965.1-201ENST00000623412 2297 ntBASIC5.25□□□□□ -1.57
HOXC13P31276 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC5.25□□□□□ -1.57
HOXC13P31276 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
HOXC13P31276 AC105402.1-201ENST00000413336 545 ntBASIC5.25□□□□□ -1.57
HOXC13P31276 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC5.25□□□□□ -1.57
HOXC13P31276 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC5.25□□□□□ -1.57
HOXC13P31276 DPY19L1P2-201ENST00000426647 915 ntBASIC5.25□□□□□ -1.57
HOXC13P31276 COX6CP13-201ENST00000428703 226 ntBASIC5.25□□□□□ -1.57
HOXC13P31276 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC5.25□□□□□ -1.57
HOXC13P31276 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC5.25□□□□□ -1.57
HOXC13P31276 RPS29P9-201ENST00000440360 171 ntBASIC5.25□□□□□ -1.57
HOXC13P31276 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC5.25□□□□□ -1.57
HOXC13P31276 MTND2P3-201ENST00000452458 470 ntBASIC5.25□□□□□ -1.57
HOXC13P31276 TPRKBP1-201ENST00000456243 481 ntBASIC5.25□□□□□ -1.57
HOXC13P31276 HESX1-202ENST00000473921 757 ntTSL 5 BASIC5.25□□□□□ -1.57
HOXC13P31276 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.25□□□□□ -1.57
HOXC13P31276 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC5.25□□□□□ -1.57
HOXC13P31276 RNA5SP230-201ENST00000517039 122 ntBASIC5.25□□□□□ -1.57
HOXC13P31276 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC5.25□□□□□ -1.57
HOXC13P31276 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC5.25□□□□□ -1.57
HOXC13P31276 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
HOXC13P31276 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC5.25□□□□□ -1.57
HOXC13P31276 NPM1P47-201ENST00000560843 856 ntBASIC5.25□□□□□ -1.57
HOXC13P31276 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC5.25□□□□□ -1.57
HOXC13P31276 MIR4270-201ENST00000581799 70 ntBASIC5.25□□□□□ -1.57
HOXC13P31276 MYLK-221ENST00000583087 678 ntTSL 4 BASIC5.25□□□□□ -1.57
HOXC13P31276 MIR4512-201ENST00000583257 77 ntBASIC5.25□□□□□ -1.57
HOXC13P31276 AC110743.1-201ENST00000584870 478 ntBASIC5.25□□□□□ -1.57
HOXC13P31276 AC011487.3-201ENST00000593607 453 ntBASIC5.25□□□□□ -1.57
HOXC13P31276 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
HOXC13P31276 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC5.25□□□□□ -1.57
HOXC13P31276 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.24□□□□□ -1.57
HOXC13P31276 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
HOXC13P31276 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC5.24□□□□□ -1.57
HOXC13P31276 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
HOXC13P31276 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
HOXC13P31276 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
HOXC13P31276 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
HOXC13P31276 CARF-208ENST00000428585 2513 ntTSL 2 BASIC5.24□□□□□ -1.57
HOXC13P31276 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC5.24□□□□□ -1.57
HOXC13P31276 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
HOXC13P31276 BCLAF1P2-201ENST00000624956 2609 ntBASIC5.24□□□□□ -1.57
HOXC13P31276 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC5.24□□□□□ -1.57
HOXC13P31276 AC026523.2-201ENST00000625039 7739 ntBASIC5.24□□□□□ -1.57
HOXC13P31276 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
HOXC13P31276 AL589826.1-201ENST00000340697 249 ntBASIC5.24□□□□□ -1.57
HOXC13P31276 OR1F12-201ENST00000402365 945 ntBASIC5.24□□□□□ -1.57
HOXC13P31276 RPL21P67-201ENST00000402896 478 ntBASIC5.24□□□□□ -1.57
HOXC13P31276 AL035079.1-201ENST00000405210 287 ntBASIC5.24□□□□□ -1.57
HOXC13P31276 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC5.24□□□□□ -1.57
HOXC13P31276 HMGN2P27-201ENST00000427352 270 ntBASIC5.24□□□□□ -1.57
HOXC13P31276 RPS24P8-201ENST00000431490 402 ntBASIC5.24□□□□□ -1.57
HOXC13P31276 AC112498.1-201ENST00000444401 332 ntBASIC5.24□□□□□ -1.57
HOXC13P31276 GEMIN8P3-201ENST00000445417 720 ntBASIC5.24□□□□□ -1.57
HOXC13P31276 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC5.24□□□□□ -1.57
HOXC13P31276 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC5.24□□□□□ -1.57
HOXC13P31276 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC5.24□□□□□ -1.57
HOXC13P31276 RN7SL443P-201ENST00000464331 290 ntBASIC5.24□□□□□ -1.57
HOXC13P31276 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC5.24□□□□□ -1.57
HOXC13P31276 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC5.24□□□□□ -1.57
HOXC13P31276 RNU6-1308P-201ENST00000516817 103 ntBASIC5.24□□□□□ -1.57
HOXC13P31276 MORF4L1P3-201ENST00000525966 950 ntBASIC5.24□□□□□ -1.57
HOXC13P31276 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
HOXC13P31276 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC5.24□□□□□ -1.57
HOXC13P31276 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC5.24□□□□□ -1.57
HOXC13P31276 HMGB3P26-201ENST00000560051 582 ntBASIC5.24□□□□□ -1.57
HOXC13P31276 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC5.24□□□□□ -1.57
HOXC13P31276 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
HOXC13P31276 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC5.24□□□□□ -1.57
HOXC13P31276 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC5.24□□□□□ -1.57
HOXC13P31276 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC5.24□□□□□ -1.57
HOXC13P31276 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC5.24□□□□□ -1.57
HOXC13P31276 AC100847.1-201ENST00000611316 481 ntBASIC5.24□□□□□ -1.57
HOXC13P31276 AC016957.2-201ENST00000616998 848 ntBASIC5.24□□□□□ -1.57
HOXC13P31276 AC010435.1-201ENST00000623353 1177 ntBASIC5.24□□□□□ -1.57
HOXC13P31276 ZNRD1ASP-221ENST00000637794 1074 ntBASIC5.24□□□□□ -1.57
HOXC13P31276 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC5.24□□□□□ -1.57
HOXC13P31276 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
HOXC13P31276 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.24□□□□□ -1.57
HOXC13P31276 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
HOXC13P31276 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
HOXC13P31276 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC5.24□□□□□ -1.57
HOXC13P31276 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC5.24□□□□□ -1.57
HOXC13P31276 AC074029.4-201ENST00000624796 1859 ntBASIC5.24□□□□□ -1.57
HOXC13P31276 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
HOXC13P31276 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
HOXC13P31276 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
HOXC13P31276 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
HOXC13P31276 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
HOXC13P31276 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
HOXC13P31276 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
HOXC13P31276 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
HOXC13P31276 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
HOXC13P31276 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
HOXC13P31276 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
HOXC13P31276 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.23□□□□□ -1.57
HOXC13P31276 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
HOXC13P31276 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC5.23□□□□□ -1.57
HOXC13P31276 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms