Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 RNU6-156P-201ENST00000621869 107 ntBASIC5.09□□□□□ -1.59
TNFSF4P23510 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC5.09□□□□□ -1.59
TNFSF4P23510 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC5.09□□□□□ -1.59
TNFSF4P23510 AP003485.2-201ENST00000623636 610 ntBASIC5.09□□□□□ -1.59
TNFSF4P23510 AC135068.5-201ENST00000624197 983 ntBASIC5.09□□□□□ -1.59
TNFSF4P23510 AL357562.1-201ENST00000624911 609 ntBASIC5.09□□□□□ -1.59
TNFSF4P23510 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
TNFSF4P23510 AC025470.1-201ENST00000510053 2032 ntBASIC5.09□□□□□ -1.6
TNFSF4P23510 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
TNFSF4P23510 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
TNFSF4P23510 AL022322.2-201ENST00000624072 20397 ntBASIC5.08□□□□□ -1.6
TNFSF4P23510 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
TNFSF4P23510 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
TNFSF4P23510 AC005539.1-201ENST00000443768 1479 ntBASIC5.08□□□□□ -1.6
TNFSF4P23510 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC5.08□□□□□ -1.6
TNFSF4P23510 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
TNFSF4P23510 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
TNFSF4P23510 RNU6-251P-201ENST00000363235 104 ntBASIC5.08□□□□□ -1.6
TNFSF4P23510 RNA5-8SP5-201ENST00000365304 152 ntBASIC5.08□□□□□ -1.6
TNFSF4P23510 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC5.08□□□□□ -1.6
TNFSF4P23510 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC5.08□□□□□ -1.6
TNFSF4P23510 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
TNFSF4P23510 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC5.08□□□□□ -1.6
TNFSF4P23510 AL121835.1-201ENST00000404250 354 ntBASIC5.08□□□□□ -1.6
TNFSF4P23510 AL096800.1-201ENST00000405326 893 ntBASIC5.08□□□□□ -1.6
TNFSF4P23510 FIGN-202ENST00000409634 746 ntTSL 5 BASIC5.08□□□□□ -1.6
TNFSF4P23510 RN7SKP240-201ENST00000410583 375 ntBASIC5.08□□□□□ -1.6
TNFSF4P23510 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC5.08□□□□□ -1.6
TNFSF4P23510 AL133482.1-201ENST00000415988 498 ntBASIC5.08□□□□□ -1.6
TNFSF4P23510 BMS1P13-201ENST00000417301 885 ntBASIC5.08□□□□□ -1.6
TNFSF4P23510 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC5.08□□□□□ -1.6
TNFSF4P23510 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC5.08□□□□□ -1.6
TNFSF4P23510 RPL7P53-201ENST00000421245 739 ntBASIC5.08□□□□□ -1.6
TNFSF4P23510 MTCO3P1-205ENST00000422088 832 ntBASIC5.08□□□□□ -1.6
TNFSF4P23510 RPL30P3-201ENST00000424262 333 ntBASIC5.08□□□□□ -1.6
TNFSF4P23510 UBE2V1P1-201ENST00000430836 445 ntBASIC5.08□□□□□ -1.6
TNFSF4P23510 MTND1P32-201ENST00000433043 938 ntBASIC5.08□□□□□ -1.6
TNFSF4P23510 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC5.08□□□□□ -1.6
TNFSF4P23510 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
TNFSF4P23510 AL008629.1-201ENST00000438615 184 ntBASIC5.08□□□□□ -1.6
TNFSF4P23510 AL138899.2-201ENST00000439139 499 ntBASIC5.08□□□□□ -1.6
TNFSF4P23510 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC5.08□□□□□ -1.6
TNFSF4P23510 BMS1P10-201ENST00000443754 1120 ntBASIC5.08□□□□□ -1.6
TNFSF4P23510 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC5.08□□□□□ -1.6
TNFSF4P23510 AL445687.2-201ENST00000458156 728 ntBASIC5.08□□□□□ -1.6
TNFSF4P23510 RNU1-88P-201ENST00000459274 128 ntBASIC5.08□□□□□ -1.6
TNFSF4P23510 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC5.08□□□□□ -1.6
TNFSF4P23510 AC094085.1-201ENST00000468914 584 ntBASIC5.08□□□□□ -1.6
TNFSF4P23510 ACTG1P13-201ENST00000486987 1043 ntBASIC5.08□□□□□ -1.6
TNFSF4P23510 AC025458.1-201ENST00000506046 166 ntBASIC5.08□□□□□ -1.6
TNFSF4P23510 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC5.08□□□□□ -1.6
TNFSF4P23510 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC5.08□□□□□ -1.6
TNFSF4P23510 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC5.08□□□□□ -1.6
TNFSF4P23510 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC5.08□□□□□ -1.6
TNFSF4P23510 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC5.08□□□□□ -1.6
TNFSF4P23510 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
TNFSF4P23510 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC5.08□□□□□ -1.6
TNFSF4P23510 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC5.08□□□□□ -1.6
TNFSF4P23510 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC5.08□□□□□ -1.6
TNFSF4P23510 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC5.08□□□□□ -1.6
TNFSF4P23510 AP005119.1-201ENST00000580956 292 ntBASIC5.08□□□□□ -1.6
TNFSF4P23510 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC5.08□□□□□ -1.6
TNFSF4P23510 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC5.08□□□□□ -1.6
TNFSF4P23510 TEX41-218ENST00000596540 882 ntTSL 5 BASIC5.08□□□□□ -1.6
TNFSF4P23510 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC5.08□□□□□ -1.6
TNFSF4P23510 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC5.08□□□□□ -1.6
TNFSF4P23510 AL021918.2-201ENST00000613415 194 ntBASIC5.08□□□□□ -1.6
TNFSF4P23510 AC024884.1-201ENST00000620583 399 ntBASIC5.08□□□□□ -1.6
TNFSF4P23510 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC5.08□□□□□ -1.6
TNFSF4P23510 AP001962.1-201ENST00000624114 559 ntBASIC5.08□□□□□ -1.6
TNFSF4P23510 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC5.08□□□□□ -1.6
TNFSF4P23510 MTND2P41-201ENST00000637599 773 ntBASIC5.08□□□□□ -1.6
TNFSF4P23510 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC5.08□□□□□ -1.6
TNFSF4P23510 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
TNFSF4P23510 AP000776.1-201ENST00000530032 1663 ntBASIC5.08□□□□□ -1.6
TNFSF4P23510 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
TNFSF4P23510 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
TNFSF4P23510 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC5.08□□□□□ -1.6
TNFSF4P23510 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC5.08□□□□□ -1.6
TNFSF4P23510 AC011447.7-201ENST00000624228 1590 ntBASIC5.08□□□□□ -1.6
TNFSF4P23510 GVINP1-202ENST00000531871 7271 ntBASIC5.08□□□□□ -1.6
TNFSF4P23510 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
TNFSF4P23510 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
TNFSF4P23510 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC5.07□□□□□ -1.6
TNFSF4P23510 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
TNFSF4P23510 OFD1P9Y-201ENST00000417699 1491 ntBASIC5.07□□□□□ -1.6
TNFSF4P23510 ALB-219ENST00000621085 1418 ntTSL 5 BASIC5.07□□□□□ -1.6
TNFSF4P23510 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.07□□□□□ -1.6
TNFSF4P23510 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
TNFSF4P23510 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC5.07□□□□□ -1.6
TNFSF4P23510 SLC9B1P1-201ENST00000331172 1337 ntBASIC5.07□□□□□ -1.6
TNFSF4P23510 AC107982.1-201ENST00000507171 1300 ntBASIC5.07□□□□□ -1.6
TNFSF4P23510 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC5.07□□□□□ -1.6
TNFSF4P23510 RN7SKP224-201ENST00000364140 325 ntBASIC5.07□□□□□ -1.6
TNFSF4P23510 RN7SKP128-201ENST00000364270 303 ntBASIC5.07□□□□□ -1.6
TNFSF4P23510 RN7SKP275-201ENST00000364626 301 ntBASIC5.07□□□□□ -1.6
TNFSF4P23510 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
TNFSF4P23510 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
TNFSF4P23510 RNU6-157P-201ENST00000383957 107 ntBASIC5.07□□□□□ -1.6
TNFSF4P23510 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms