Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 CYCSP10-201ENST00000417973 294 ntBASIC4.9□□□□□ -1.63
CDH3P22223 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.9□□□□□ -1.63
CDH3P22223 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC4.9□□□□□ -1.63
CDH3P22223 AL590762.4-201ENST00000425885 253 ntBASIC4.9□□□□□ -1.63
CDH3P22223 ZNF965P-201ENST00000432501 817 ntBASIC4.9□□□□□ -1.63
CDH3P22223 MTND2P21-201ENST00000436242 1042 ntBASIC4.9□□□□□ -1.63
CDH3P22223 AL772161.1-201ENST00000439130 476 ntBASIC4.9□□□□□ -1.63
CDH3P22223 SUMO2P1-206ENST00000445436 284 ntBASIC4.9□□□□□ -1.63
CDH3P22223 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC4.9□□□□□ -1.63
CDH3P22223 BX842559.2-201ENST00000451418 605 ntBASIC4.9□□□□□ -1.63
CDH3P22223 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
CDH3P22223 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC4.9□□□□□ -1.63
CDH3P22223 PGBD4P4-201ENST00000509673 613 ntBASIC4.9□□□□□ -1.63
CDH3P22223 RNA5SP360-201ENST00000516555 118 ntBASIC4.9□□□□□ -1.63
CDH3P22223 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC4.9□□□□□ -1.63
CDH3P22223 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC4.9□□□□□ -1.63
CDH3P22223 AP001922.4-201ENST00000526967 290 ntBASIC4.9□□□□□ -1.63
CDH3P22223 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC4.9□□□□□ -1.63
CDH3P22223 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC4.9□□□□□ -1.63
CDH3P22223 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC4.9□□□□□ -1.63
CDH3P22223 OR1F2P-201ENST00000570470 933 ntBASIC4.9□□□□□ -1.63
CDH3P22223 MIR4691-201ENST00000583764 85 ntBASIC4.9□□□□□ -1.63
CDH3P22223 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC4.9□□□□□ -1.63
CDH3P22223 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC4.9□□□□□ -1.63
CDH3P22223 AC024940.4-201ENST00000605507 246 ntBASIC4.9□□□□□ -1.63
CDH3P22223 AC092953.2-201ENST00000608000 699 ntBASIC4.9□□□□□ -1.63
CDH3P22223 AC005021.1-201ENST00000608730 355 ntBASIC4.9□□□□□ -1.63
CDH3P22223 AC006213.4-201ENST00000616184 634 ntBASIC4.9□□□□□ -1.63
CDH3P22223 AL356274.1-201ENST00000617064 410 ntBASIC4.9□□□□□ -1.63
CDH3P22223 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC4.9□□□□□ -1.63
CDH3P22223 AL138960.2-201ENST00000625145 535 ntBASIC4.9□□□□□ -1.63
CDH3P22223 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC4.9□□□□□ -1.63
CDH3P22223 ZNRD1ASP-221ENST00000637794 1074 ntBASIC4.9□□□□□ -1.63
CDH3P22223 AC017002.4-201ENST00000604721 1525 ntBASIC4.9□□□□□ -1.63
CDH3P22223 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
CDH3P22223 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.9□□□□□ -1.63
CDH3P22223 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
CDH3P22223 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
CDH3P22223 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
CDH3P22223 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
CDH3P22223 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC4.9□□□□□ -1.63
CDH3P22223 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
CDH3P22223 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.9□□□□□ -1.63
CDH3P22223 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CDH3P22223 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CDH3P22223 AC092079.1-201ENST00000558620 1985 ntBASIC4.89□□□□□ -1.63
CDH3P22223 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CDH3P22223 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CDH3P22223 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CDH3P22223 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CDH3P22223 SNORA2.3-201ENST00000383920 135 ntBASIC4.89□□□□□ -1.63
CDH3P22223 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
CDH3P22223 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CDH3P22223 RANP4-201ENST00000413361 655 ntBASIC4.89□□□□□ -1.63
CDH3P22223 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC4.89□□□□□ -1.63
CDH3P22223 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC4.89□□□□□ -1.63
CDH3P22223 AL158073.1-201ENST00000426848 1104 ntBASIC4.89□□□□□ -1.63
CDH3P22223 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC4.89□□□□□ -1.63
CDH3P22223 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC4.89□□□□□ -1.63
CDH3P22223 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC4.89□□□□□ -1.63
CDH3P22223 PRPF38AP2-201ENST00000438179 851 ntBASIC4.89□□□□□ -1.63
CDH3P22223 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC4.89□□□□□ -1.63
CDH3P22223 RPL34P20-201ENST00000442771 351 ntBASIC4.89□□□□□ -1.63
CDH3P22223 AL354714.3-201ENST00000447284 493 ntBASIC4.89□□□□□ -1.63
CDH3P22223 EIF4A2P2-201ENST00000455776 1070 ntBASIC4.89□□□□□ -1.63
CDH3P22223 CABYRP1-201ENST00000465493 1045 ntBASIC4.89□□□□□ -1.63
CDH3P22223 AC112206.1-201ENST00000468416 477 ntBASIC4.89□□□□□ -1.63
CDH3P22223 NIFKP7-201ENST00000503365 834 ntBASIC4.89□□□□□ -1.63
CDH3P22223 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CDH3P22223 AC010350.1-201ENST00000504908 231 ntBASIC4.89□□□□□ -1.63
CDH3P22223 HAUS1P1-201ENST00000505275 832 ntBASIC4.89□□□□□ -1.63
CDH3P22223 AC073358.1-201ENST00000505671 684 ntBASIC4.89□□□□□ -1.63
CDH3P22223 MTCO1P31-201ENST00000506355 492 ntBASIC4.89□□□□□ -1.63
CDH3P22223 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC4.89□□□□□ -1.63
CDH3P22223 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC4.89□□□□□ -1.63
CDH3P22223 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CDH3P22223 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC4.89□□□□□ -1.63
CDH3P22223 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CDH3P22223 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC4.89□□□□□ -1.63
CDH3P22223 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC4.89□□□□□ -1.63
CDH3P22223 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CDH3P22223 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC4.89□□□□□ -1.63
CDH3P22223 AC011487.3-201ENST00000593607 453 ntBASIC4.89□□□□□ -1.63
CDH3P22223 BMS1P7-201ENST00000602440 1052 ntBASIC4.89□□□□□ -1.63
CDH3P22223 AC105254.2-201ENST00000603636 436 ntBASIC4.89□□□□□ -1.63
CDH3P22223 AC242628.1-201ENST00000606810 391 ntBASIC4.89□□□□□ -1.63
CDH3P22223 AC090948.2-201ENST00000607363 564 ntBASIC4.89□□□□□ -1.63
CDH3P22223 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC4.89□□□□□ -1.63
CDH3P22223 AC004948.1-201ENST00000609858 672 ntBASIC4.89□□□□□ -1.63
CDH3P22223 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC4.89□□□□□ -1.63
CDH3P22223 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC4.89□□□□□ -1.63
CDH3P22223 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC4.89□□□□□ -1.63
CDH3P22223 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.89□□□□□ -1.63
CDH3P22223 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CDH3P22223 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.89□□□□□ -1.63
CDH3P22223 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.89□□□□□ -1.63
CDH3P22223 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
CDH3P22223 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
CDH3P22223 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CDH3P22223 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 110.2 ms