Protein–RNA interactions for Protein: P19876

CXCL3, C-X-C motif chemokine 3, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL3P19876 HSPD1P11-201ENST00000508643 1702 ntBASIC3.8□□□□□ -1.8
CXCL3P19876 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
CXCL3P19876 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CXCL3P19876 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
CXCL3P19876 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC3.8□□□□□ -1.8
CXCL3P19876 MFSD4BP1-201ENST00000513330 1552 ntBASIC3.8□□□□□ -1.8
CXCL3P19876 PHKBP1-201ENST00000450951 1951 ntBASIC3.8□□□□□ -1.8
CXCL3P19876 NXPH1-205ENST00000602349 1953 ntBASIC3.8□□□□□ -1.8
CXCL3P19876 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CXCL3P19876 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CXCL3P19876 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CXCL3P19876 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC3.79□□□□□ -1.8
CXCL3P19876 C5orf51-204ENST00000612065 1391 ntTSL 5 BASIC3.79□□□□□ -1.8
CXCL3P19876 AL627171.1-201ENST00000618845 1308 ntBASIC3.79□□□□□ -1.8
CXCL3P19876 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CXCL3P19876 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC3.79□□□□□ -1.8
CXCL3P19876 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
CXCL3P19876 RNA5SP242-201ENST00000364171 118 ntBASIC3.79□□□□□ -1.8
CXCL3P19876 RAB5CP1-201ENST00000395972 580 ntBASIC3.79□□□□□ -1.8
CXCL3P19876 AL136131.1-201ENST00000406079 803 ntBASIC3.79□□□□□ -1.8
CXCL3P19876 ZSCAN12P1-201ENST00000406489 419 ntBASIC3.79□□□□□ -1.8
CXCL3P19876 FCF1P5-201ENST00000406490 482 ntBASIC3.79□□□□□ -1.8
CXCL3P19876 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC3.79□□□□□ -1.8
CXCL3P19876 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC3.79□□□□□ -1.8
CXCL3P19876 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC3.79□□□□□ -1.8
CXCL3P19876 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC3.79□□□□□ -1.8
CXCL3P19876 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC3.79□□□□□ -1.8
CXCL3P19876 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC3.79□□□□□ -1.8
CXCL3P19876 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC3.79□□□□□ -1.8
CXCL3P19876 MTND2P25-201ENST00000449028 610 ntBASIC3.79□□□□□ -1.8
CXCL3P19876 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CXCL3P19876 AC105918.1-201ENST00000474399 838 ntBASIC3.79□□□□□ -1.8
CXCL3P19876 AC025164.1-201ENST00000496249 478 ntBASIC3.79□□□□□ -1.8
CXCL3P19876 OR4A46P-201ENST00000527255 933 ntBASIC3.79□□□□□ -1.8
CXCL3P19876 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC3.79□□□□□ -1.8
CXCL3P19876 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC3.79□□□□□ -1.8
CXCL3P19876 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC3.79□□□□□ -1.8
CXCL3P19876 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC3.79□□□□□ -1.8
CXCL3P19876 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC3.79□□□□□ -1.8
CXCL3P19876 MIR5699-201ENST00000578903 90 ntBASIC3.79□□□□□ -1.8
CXCL3P19876 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC3.79□□□□□ -1.8
CXCL3P19876 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC3.79□□□□□ -1.8
CXCL3P19876 AC073137.1-201ENST00000605636 634 ntBASIC3.79□□□□□ -1.8
CXCL3P19876 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC3.79□□□□□ -1.8
CXCL3P19876 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC3.79□□□□□ -1.8
CXCL3P19876 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CXCL3P19876 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CXCL3P19876 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
CXCL3P19876 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
CXCL3P19876 AC083899.2-201ENST00000423285 1376 ntBASIC3.78□□□□□ -1.8
CXCL3P19876 AC092079.1-201ENST00000558620 1985 ntBASIC3.78□□□□□ -1.8
CXCL3P19876 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CXCL3P19876 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
CXCL3P19876 AL391684.1-202ENST00000641293 1636 ntBASIC3.78□□□□□ -1.8
CXCL3P19876 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CXCL3P19876 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
CXCL3P19876 MIR323A-201ENST00000362199 86 ntBASIC3.78□□□□□ -1.8
CXCL3P19876 SNORA17.1-201ENST00000362945 126 ntBASIC3.78□□□□□ -1.8
CXCL3P19876 AC019155.1-201ENST00000382242 574 ntBASIC3.78□□□□□ -1.8
CXCL3P19876 AC093719.1-202ENST00000392735 373 ntBASIC3.78□□□□□ -1.8
CXCL3P19876 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC3.78□□□□□ -1.8
CXCL3P19876 OR3A2-201ENST00000408891 1076 ntBASIC3.78□□□□□ -1.8
CXCL3P19876 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
CXCL3P19876 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC3.78□□□□□ -1.8
CXCL3P19876 AC092647.1-201ENST00000420654 287 ntBASIC3.78□□□□□ -1.8
CXCL3P19876 AC062016.2-201ENST00000420950 676 ntBASIC3.78□□□□□ -1.8
CXCL3P19876 AC234779.1-201ENST00000425910 285 ntBASIC3.78□□□□□ -1.8
CXCL3P19876 HNRNPA3P4-201ENST00000427514 803 ntBASIC3.78□□□□□ -1.8
CXCL3P19876 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC3.78□□□□□ -1.8
CXCL3P19876 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC3.78□□□□□ -1.8
CXCL3P19876 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC3.78□□□□□ -1.8
CXCL3P19876 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC3.78□□□□□ -1.8
CXCL3P19876 AC090142.1-201ENST00000465776 462 ntBASIC3.78□□□□□ -1.8
CXCL3P19876 RN7SL205P-201ENST00000490174 284 ntBASIC3.78□□□□□ -1.8
CXCL3P19876 PGAM1P13-201ENST00000507497 754 ntBASIC3.78□□□□□ -1.8
CXCL3P19876 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC3.78□□□□□ -1.8
CXCL3P19876 RNA5SP362-201ENST00000516048 118 ntBASIC3.78□□□□□ -1.8
CXCL3P19876 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC3.78□□□□□ -1.8
CXCL3P19876 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC3.78□□□□□ -1.8
CXCL3P19876 MAL2-208ENST00000523307 556 ntTSL 4 BASIC3.78□□□□□ -1.8
CXCL3P19876 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC3.78□□□□□ -1.8
CXCL3P19876 OR8X1P-201ENST00000534542 869 ntBASIC3.78□□□□□ -1.8
CXCL3P19876 AC139099.1-201ENST00000573737 976 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CXCL3P19876 RN7SL802P-201ENST00000577858 299 ntBASIC3.78□□□□□ -1.8
CXCL3P19876 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC3.78□□□□□ -1.8
CXCL3P19876 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC3.78□□□□□ -1.8
CXCL3P19876 FKBP1AP1-201ENST00000594588 318 ntBASIC3.78□□□□□ -1.8
CXCL3P19876 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC3.78□□□□□ -1.8
CXCL3P19876 RFC1-217ENST00000639695 867 ntTSL 5 BASIC3.78□□□□□ -1.8
CXCL3P19876 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
CXCL3P19876 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC3.78□□□□□ -1.8
CXCL3P19876 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CXCL3P19876 ARHGAP42P1-201ENST00000507474 1976 ntBASIC3.78□□□□□ -1.8
CXCL3P19876 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CXCL3P19876 AC135352.1-201ENST00000506173 1418 ntBASIC3.78□□□□□ -1.8
CXCL3P19876 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC3.78□□□□□ -1.81
CXCL3P19876 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CXCL3P19876 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CXCL3P19876 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CXCL3P19876 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 90.3 ms