Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC8.02□□□□□ -1.13
CSB-PGBD3P0DP91 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
CSB-PGBD3P0DP91 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC8.01□□□□□ -1.13
CSB-PGBD3P0DP91 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
CSB-PGBD3P0DP91 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC8.01□□□□□ -1.13
CSB-PGBD3P0DP91 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
CSB-PGBD3P0DP91 SMC1A-201ENST00000322213 9784 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
CSB-PGBD3P0DP91 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
CSB-PGBD3P0DP91 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC8.01□□□□□ -1.13
CSB-PGBD3P0DP91 CASC19-280ENST00000642102 1351 ntBASIC8.01□□□□□ -1.13
CSB-PGBD3P0DP91 AL137100.1-201ENST00000556703 1620 ntBASIC8.01□□□□□ -1.13
CSB-PGBD3P0DP91 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
CSB-PGBD3P0DP91 OR10R3P-201ENST00000361688 942 ntBASIC8.01□□□□□ -1.13
CSB-PGBD3P0DP91 SNORA72.1-201ENST00000363485 129 ntBASIC8.01□□□□□ -1.13
CSB-PGBD3P0DP91 SNORA58B-201ENST00000364259 136 ntBASIC8.01□□□□□ -1.13
CSB-PGBD3P0DP91 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC8.01□□□□□ -1.13
CSB-PGBD3P0DP91 RNU6-116P-201ENST00000384042 109 ntBASIC8.01□□□□□ -1.13
CSB-PGBD3P0DP91 RNU6-98P-201ENST00000384173 107 ntBASIC8.01□□□□□ -1.13
CSB-PGBD3P0DP91 ARL4AP5-201ENST00000404372 599 ntBASIC8.01□□□□□ -1.13
CSB-PGBD3P0DP91 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC8.01□□□□□ -1.13
CSB-PGBD3P0DP91 USP9YP20-201ENST00000419224 558 ntBASIC8.01□□□□□ -1.13
CSB-PGBD3P0DP91 RPL36P18-201ENST00000419316 318 ntBASIC8.01□□□□□ -1.13
CSB-PGBD3P0DP91 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC8.01□□□□□ -1.13
CSB-PGBD3P0DP91 AL662874.1-201ENST00000426065 230 ntBASIC8.01□□□□□ -1.13
CSB-PGBD3P0DP91 AL627308.1-201ENST00000435693 821 ntBASIC8.01□□□□□ -1.13
CSB-PGBD3P0DP91 CACYBPP1-201ENST00000438592 684 ntBASIC8.01□□□□□ -1.13
CSB-PGBD3P0DP91 HMGB1P16-201ENST00000447155 540 ntBASIC8.01□□□□□ -1.13
CSB-PGBD3P0DP91 LINC01831-201ENST00000449772 493 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
CSB-PGBD3P0DP91 RN7SL610P-201ENST00000463845 291 ntBASIC8.01□□□□□ -1.13
CSB-PGBD3P0DP91 CCDC75P1-201ENST00000469247 791 ntBASIC8.01□□□□□ -1.13
CSB-PGBD3P0DP91 RPL7P18-201ENST00000478965 734 ntBASIC8.01□□□□□ -1.13
CSB-PGBD3P0DP91 NENFP3-201ENST00000503735 313 ntBASIC8.01□□□□□ -1.13
CSB-PGBD3P0DP91 AC008629.2-201ENST00000503783 483 ntBASIC8.01□□□□□ -1.13
CSB-PGBD3P0DP91 WBP1LP4-201ENST00000505043 344 ntBASIC8.01□□□□□ -1.13
CSB-PGBD3P0DP91 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC8.01□□□□□ -1.13
CSB-PGBD3P0DP91 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC8.01□□□□□ -1.13
CSB-PGBD3P0DP91 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC8.01□□□□□ -1.13
CSB-PGBD3P0DP91 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
CSB-PGBD3P0DP91 AC008083.2-201ENST00000546707 476 ntBASIC8.01□□□□□ -1.13
CSB-PGBD3P0DP91 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC8.01□□□□□ -1.13
CSB-PGBD3P0DP91 AC116158.1-201ENST00000560231 2129 ntBASIC8.01□□□□□ -1.13
CSB-PGBD3P0DP91 MIR4666A-201ENST00000580160 79 ntBASIC8.01□□□□□ -1.13
CSB-PGBD3P0DP91 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC8.01□□□□□ -1.13
CSB-PGBD3P0DP91 AC083899.3-201ENST00000603413 594 ntBASIC8.01□□□□□ -1.13
CSB-PGBD3P0DP91 AP000907.4-201ENST00000604143 237 ntBASIC8.01□□□□□ -1.13
CSB-PGBD3P0DP91 AC090970.3-201ENST00000612566 866 ntBASIC8.01□□□□□ -1.13
CSB-PGBD3P0DP91 AC090517.2-201ENST00000614966 680 ntBASIC8.01□□□□□ -1.13
CSB-PGBD3P0DP91 HOTTIP_3.1-201ENST00000619957 337 ntBASIC8.01□□□□□ -1.13
CSB-PGBD3P0DP91 AC087565.3-203ENST00000641018 837 ntBASIC8.01□□□□□ -1.13
CSB-PGBD3P0DP91 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
CSB-PGBD3P0DP91 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC8.01□□□□□ -1.13
CSB-PGBD3P0DP91 IL5RA-207ENST00000438560 2252 ntAPPRIS ALT2 TSL 2 BASIC8.01□□□□□ -1.13
CSB-PGBD3P0DP91 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC8.01□□□□□ -1.13
CSB-PGBD3P0DP91 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC8.01□□□□□ -1.13
CSB-PGBD3P0DP91 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
CSB-PGBD3P0DP91 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
CSB-PGBD3P0DP91 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC8.01□□□□□ -1.13
CSB-PGBD3P0DP91 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
CSB-PGBD3P0DP91 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC8.01□□□□□ -1.13
CSB-PGBD3P0DP91 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
CSB-PGBD3P0DP91 CNOT1-216ENST00000569240 7660 ntAPPRIS ALT1 TSL 1 (best) BASIC8.01□□□□□ -1.13
CSB-PGBD3P0DP91 CENPJ-206ENST00000616936 5020 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
CSB-PGBD3P0DP91 AL391262.1-201ENST00000556558 1992 ntBASIC8.01□□□□□ -1.13
CSB-PGBD3P0DP91 PPFIA2-203ENST00000443686 3782 ntTSL 2 BASIC8□□□□□ -1.13
CSB-PGBD3P0DP91 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC8□□□□□ -1.13
CSB-PGBD3P0DP91 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
CSB-PGBD3P0DP91 AC079753.1-201ENST00000623243 3868 ntBASIC8□□□□□ -1.13
CSB-PGBD3P0DP91 NAA15-208ENST00000515576 2456 ntTSL 2 BASIC8□□□□□ -1.13
CSB-PGBD3P0DP91 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC8□□□□□ -1.13
CSB-PGBD3P0DP91 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC8□□□□□ -1.13
CSB-PGBD3P0DP91 GAPDHP24-201ENST00000328713 983 ntBASIC8□□□□□ -1.13
CSB-PGBD3P0DP91 FAM32BP-201ENST00000344033 333 ntBASIC8□□□□□ -1.13
CSB-PGBD3P0DP91 SNORA64.1-201ENST00000362600 132 ntBASIC8□□□□□ -1.13
CSB-PGBD3P0DP91 OR1L1-202ENST00000373686 1083 ntBASIC8□□□□□ -1.13
CSB-PGBD3P0DP91 RNU6-1200P-201ENST00000384162 107 ntBASIC8□□□□□ -1.13
CSB-PGBD3P0DP91 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
CSB-PGBD3P0DP91 NRBF2P2-201ENST00000413087 861 ntBASIC8□□□□□ -1.13
CSB-PGBD3P0DP91 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC8□□□□□ -1.13
CSB-PGBD3P0DP91 OR6K4P-201ENST00000423179 955 ntBASIC8□□□□□ -1.13
CSB-PGBD3P0DP91 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC8□□□□□ -1.13
CSB-PGBD3P0DP91 FTH1P10-202ENST00000430907 550 ntBASIC8□□□□□ -1.13
CSB-PGBD3P0DP91 USP12PX-201ENST00000432383 1057 ntBASIC8□□□□□ -1.13
CSB-PGBD3P0DP91 RPL31P44-201ENST00000447680 377 ntBASIC8□□□□□ -1.13
CSB-PGBD3P0DP91 AL133445.1-201ENST00000467051 452 ntBASIC8□□□□□ -1.13
CSB-PGBD3P0DP91 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
CSB-PGBD3P0DP91 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC8□□□□□ -1.13
CSB-PGBD3P0DP91 AC073522.1-201ENST00000483312 377 ntBASIC8□□□□□ -1.13
CSB-PGBD3P0DP91 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC8□□□□□ -1.13
CSB-PGBD3P0DP91 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC8□□□□□ -1.13
CSB-PGBD3P0DP91 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC8□□□□□ -1.13
CSB-PGBD3P0DP91 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC8□□□□□ -1.13
CSB-PGBD3P0DP91 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC8□□□□□ -1.13
CSB-PGBD3P0DP91 AC012435.1-202ENST00000568772 240 ntBASIC8□□□□□ -1.13
CSB-PGBD3P0DP91 EIF1P6-201ENST00000600054 334 ntBASIC8□□□□□ -1.13
CSB-PGBD3P0DP91 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC8□□□□□ -1.13
CSB-PGBD3P0DP91 AC064836.2-201ENST00000609491 462 ntBASIC8□□□□□ -1.13
CSB-PGBD3P0DP91 AC010133.1-201ENST00000615809 842 ntBASIC8□□□□□ -1.13
CSB-PGBD3P0DP91 AL356274.1-201ENST00000617064 410 ntBASIC8□□□□□ -1.13
CSB-PGBD3P0DP91 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC8□□□□□ -1.13
CSB-PGBD3P0DP91 AL445670.1-201ENST00000618889 801 ntBASIC8□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 108.9 ms