Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 AL391358.1-201ENST00000605342 190 ntBASIC5.04□□□□□ -1.6
TPM1P09493 AC074276.2-201ENST00000619891 348 ntBASIC5.04□□□□□ -1.6
TPM1P09493 RMST_9.1-201ENST00000619945 193 ntBASIC5.04□□□□□ -1.6
TPM1P09493 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC5.04□□□□□ -1.6
TPM1P09493 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
TPM1P09493 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
TPM1P09493 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
TPM1P09493 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC5.04□□□□□ -1.6
TPM1P09493 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
TPM1P09493 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
TPM1P09493 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC5.03□□□□□ -1.6
TPM1P09493 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
TPM1P09493 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
TPM1P09493 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
TPM1P09493 SNORD74.4-201ENST00000364129 80 ntBASIC5.03□□□□□ -1.6
TPM1P09493 RPL23AP48-201ENST00000406913 488 ntBASIC5.03□□□□□ -1.6
TPM1P09493 VN1R8P-201ENST00000407739 893 ntBASIC5.03□□□□□ -1.6
TPM1P09493 RN7SKP267-201ENST00000410381 285 ntBASIC5.03□□□□□ -1.6
TPM1P09493 UBTFL3-201ENST00000418934 1024 ntBASIC5.03□□□□□ -1.6
TPM1P09493 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
TPM1P09493 MYO5BP2-201ENST00000449815 1277 ntBASIC5.03□□□□□ -1.6
TPM1P09493 AL935212.3-201ENST00000450729 284 ntBASIC5.03□□□□□ -1.6
TPM1P09493 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC5.03□□□□□ -1.6
TPM1P09493 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
TPM1P09493 UBTFL6-201ENST00000477929 1024 ntBASIC5.03□□□□□ -1.6
TPM1P09493 AC037198.2-201ENST00000478845 733 ntBASIC5.03□□□□□ -1.6
TPM1P09493 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC5.03□□□□□ -1.6
TPM1P09493 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC5.03□□□□□ -1.6
TPM1P09493 AC090281.1-201ENST00000523019 276 ntBASIC5.03□□□□□ -1.6
TPM1P09493 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC5.03□□□□□ -1.6
TPM1P09493 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC5.03□□□□□ -1.6
TPM1P09493 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC5.03□□□□□ -1.6
TPM1P09493 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC5.03□□□□□ -1.6
TPM1P09493 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC5.03□□□□□ -1.6
TPM1P09493 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC5.03□□□□□ -1.6
TPM1P09493 AL138721.1-201ENST00000616756 179 ntBASIC5.03□□□□□ -1.6
TPM1P09493 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
TPM1P09493 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
TPM1P09493 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
TPM1P09493 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
TPM1P09493 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
TPM1P09493 PABPC1P6-201ENST00000445594 1829 ntBASIC5.02□□□□□ -1.61
TPM1P09493 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
TPM1P09493 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC5.02□□□□□ -1.61
TPM1P09493 AL391684.1-202ENST00000641293 1636 ntBASIC5.02□□□□□ -1.61
TPM1P09493 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC5.02□□□□□ -1.61
TPM1P09493 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
TPM1P09493 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
TPM1P09493 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC5.02□□□□□ -1.61
TPM1P09493 RPL23P2-201ENST00000320371 421 ntBASIC5.02□□□□□ -1.61
TPM1P09493 RNU6ATAC7P-201ENST00000408111 127 ntBASIC5.02□□□□□ -1.61
TPM1P09493 RAB9AP4-201ENST00000415230 609 ntBASIC5.02□□□□□ -1.61
TPM1P09493 AC092570.3-201ENST00000420113 693 ntBASIC5.02□□□□□ -1.61
TPM1P09493 AC062016.2-201ENST00000420950 676 ntBASIC5.02□□□□□ -1.61
TPM1P09493 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC5.02□□□□□ -1.61
TPM1P09493 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC5.02□□□□□ -1.61
TPM1P09493 AC092647.3-201ENST00000443044 633 ntBASIC5.02□□□□□ -1.61
TPM1P09493 AC112498.1-201ENST00000444401 332 ntBASIC5.02□□□□□ -1.61
TPM1P09493 AURKAPS2-201ENST00000454983 333 ntBASIC5.02□□□□□ -1.61
TPM1P09493 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC5.02□□□□□ -1.61
TPM1P09493 AC090013.1-201ENST00000485147 480 ntBASIC5.02□□□□□ -1.61
TPM1P09493 UBA52P7-201ENST00000486088 380 ntBASIC5.02□□□□□ -1.61
TPM1P09493 AC109462.1-201ENST00000491087 368 ntBASIC5.02□□□□□ -1.61
TPM1P09493 AC104109.1-201ENST00000498563 436 ntBASIC5.02□□□□□ -1.61
TPM1P09493 RN7SKP147-201ENST00000517154 244 ntBASIC5.02□□□□□ -1.61
TPM1P09493 IGHV3-63-201ENST00000518422 341 ntBASIC5.02□□□□□ -1.61
TPM1P09493 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC5.02□□□□□ -1.61
TPM1P09493 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC5.02□□□□□ -1.61
TPM1P09493 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC5.02□□□□□ -1.61
TPM1P09493 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC5.02□□□□□ -1.61
TPM1P09493 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC5.02□□□□□ -1.61
TPM1P09493 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC5.02□□□□□ -1.61
TPM1P09493 ADAD1P2-201ENST00000588476 646 ntBASIC5.02□□□□□ -1.61
TPM1P09493 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC5.02□□□□□ -1.61
TPM1P09493 AC023762.1-201ENST00000603280 584 ntBASIC5.02□□□□□ -1.61
TPM1P09493 AC020634.1-201ENST00000608701 549 ntBASIC5.02□□□□□ -1.61
TPM1P09493 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
TPM1P09493 MIR4727-201ENST00000622232 55 ntBASIC5.02□□□□□ -1.61
TPM1P09493 AC004808.2-201ENST00000627965 773 ntBASIC5.02□□□□□ -1.61
TPM1P09493 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC5.02□□□□□ -1.61
TPM1P09493 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
TPM1P09493 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
TPM1P09493 AC011266.1-201ENST00000624119 3569 ntBASIC5.02□□□□□ -1.61
TPM1P09493 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
TPM1P09493 AC090971.4-201ENST00000560291 1800 ntBASIC5.02□□□□□ -1.61
TPM1P09493 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
TPM1P09493 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
TPM1P09493 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
TPM1P09493 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
TPM1P09493 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
TPM1P09493 AC097504.1-201ENST00000515103 2415 ntBASIC5.01□□□□□ -1.61
TPM1P09493 AC135352.1-201ENST00000506173 1418 ntBASIC5.01□□□□□ -1.61
TPM1P09493 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
TPM1P09493 AC019155.1-201ENST00000382242 574 ntBASIC5.01□□□□□ -1.61
TPM1P09493 IL6-206ENST00000407492 926 ntTSL 3 BASIC5.01□□□□□ -1.61
TPM1P09493 AC096644.3-201ENST00000416788 338 ntBASIC5.01□□□□□ -1.61
TPM1P09493 NANOGP6-201ENST00000429190 847 ntBASIC5.01□□□□□ -1.61
TPM1P09493 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC5.01□□□□□ -1.61
TPM1P09493 AC104306.1-201ENST00000449702 371 ntBASIC5.01□□□□□ -1.61
TPM1P09493 AC010733.1-201ENST00000451515 401 ntBASIC5.01□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 86 ms