Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 MIMT1-201ENST00000597105 1050 ntBASIC4.49□□□□□ -1.69
MT-ND1P03886 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC4.49□□□□□ -1.69
MT-ND1P03886 AC005972.3-201ENST00000606304 481 ntBASIC4.49□□□□□ -1.69
MT-ND1P03886 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC4.49□□□□□ -1.69
MT-ND1P03886 AP003497.2-201ENST00000624220 967 ntBASIC4.49□□□□□ -1.69
MT-ND1P03886 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC4.49□□□□□ -1.69
MT-ND1P03886 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
MT-ND1P03886 OR5AC4P-202ENST00000642086 985 ntBASIC4.49□□□□□ -1.69
MT-ND1P03886 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
MT-ND1P03886 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
MT-ND1P03886 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
MT-ND1P03886 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC4.49□□□□□ -1.69
MT-ND1P03886 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC4.49□□□□□ -1.69
MT-ND1P03886 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
MT-ND1P03886 AC024341.1-201ENST00000526444 1552 ntBASIC4.48□□□□□ -1.69
MT-ND1P03886 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
MT-ND1P03886 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
MT-ND1P03886 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
MT-ND1P03886 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
MT-ND1P03886 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
MT-ND1P03886 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
MT-ND1P03886 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC4.48□□□□□ -1.69
MT-ND1P03886 U3.36-201ENST00000408418 213 ntBASIC4.48□□□□□ -1.69
MT-ND1P03886 RNU6-603P-201ENST00000411403 107 ntBASIC4.48□□□□□ -1.69
MT-ND1P03886 AL357078.2-201ENST00000416486 427 ntBASIC4.48□□□□□ -1.69
MT-ND1P03886 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC4.48□□□□□ -1.69
MT-ND1P03886 AL358176.3-201ENST00000420757 454 ntBASIC4.48□□□□□ -1.69
MT-ND1P03886 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC4.48□□□□□ -1.69
MT-ND1P03886 FAR1P1-201ENST00000427163 934 ntBASIC4.48□□□□□ -1.69
MT-ND1P03886 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC4.48□□□□□ -1.69
MT-ND1P03886 MTND4LP7-201ENST00000431728 294 ntBASIC4.48□□□□□ -1.69
MT-ND1P03886 NDUFA5P10-201ENST00000432147 357 ntBASIC4.48□□□□□ -1.69
MT-ND1P03886 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC4.48□□□□□ -1.69
MT-ND1P03886 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC4.48□□□□□ -1.69
MT-ND1P03886 AP002345.1-201ENST00000456493 928 ntBASIC4.48□□□□□ -1.69
MT-ND1P03886 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.48□□□□□ -1.69
MT-ND1P03886 RNU6-1218P-201ENST00000458990 108 ntBASIC4.48□□□□□ -1.69
MT-ND1P03886 RN7SL172P-201ENST00000460535 303 ntBASIC4.48□□□□□ -1.69
MT-ND1P03886 COPS8P2-201ENST00000473228 627 ntBASIC4.48□□□□□ -1.69
MT-ND1P03886 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
MT-ND1P03886 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC4.48□□□□□ -1.69
MT-ND1P03886 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC4.48□□□□□ -1.69
MT-ND1P03886 AC072052.1-201ENST00000496556 306 ntBASIC4.48□□□□□ -1.69
MT-ND1P03886 AC010627.1-201ENST00000503819 1294 ntBASIC4.48□□□□□ -1.69
MT-ND1P03886 AC108120.2-201ENST00000512973 294 ntBASIC4.48□□□□□ -1.69
MT-ND1P03886 RNA5SP43-201ENST00000516559 110 ntBASIC4.48□□□□□ -1.69
MT-ND1P03886 RNA5SP392-201ENST00000516905 112 ntBASIC4.48□□□□□ -1.69
MT-ND1P03886 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC4.48□□□□□ -1.69
MT-ND1P03886 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC4.48□□□□□ -1.69
MT-ND1P03886 AC004825.1-201ENST00000555068 586 ntBASIC4.48□□□□□ -1.69
MT-ND1P03886 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.48□□□□□ -1.69
MT-ND1P03886 AC079075.2-201ENST00000557964 449 ntTSL 4 BASIC4.48□□□□□ -1.69
MT-ND1P03886 AC018552.3-201ENST00000567416 561 ntBASIC4.48□□□□□ -1.69
MT-ND1P03886 TVP23CP2-201ENST00000571473 623 ntBASIC4.48□□□□□ -1.69
MT-ND1P03886 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC4.48□□□□□ -1.69
MT-ND1P03886 SS18L2P2-201ENST00000583960 235 ntBASIC4.48□□□□□ -1.69
MT-ND1P03886 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC4.48□□□□□ -1.69
MT-ND1P03886 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC4.48□□□□□ -1.69
MT-ND1P03886 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC4.48□□□□□ -1.69
MT-ND1P03886 AP000864.1-201ENST00000609424 650 ntBASIC4.48□□□□□ -1.69
MT-ND1P03886 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC4.48□□□□□ -1.69
MT-ND1P03886 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC4.48□□□□□ -1.69
MT-ND1P03886 LINC00216-201ENST00000623548 1126 ntBASIC4.48□□□□□ -1.69
MT-ND1P03886 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC4.48□□□□□ -1.69
MT-ND1P03886 AC006453.5-201ENST00000636451 619 ntBASIC4.48□□□□□ -1.69
MT-ND1P03886 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
MT-ND1P03886 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.48□□□□□ -1.69
MT-ND1P03886 THAP12P4-201ENST00000528321 2266 ntBASIC4.48□□□□□ -1.69
MT-ND1P03886 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
MT-ND1P03886 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
MT-ND1P03886 AC104118.1-201ENST00000607625 1589 ntBASIC4.48□□□□□ -1.69
MT-ND1P03886 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
MT-ND1P03886 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
MT-ND1P03886 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.47□□□□□ -1.69
MT-ND1P03886 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
MT-ND1P03886 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.47□□□□□ -1.69
MT-ND1P03886 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
MT-ND1P03886 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
MT-ND1P03886 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
MT-ND1P03886 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
MT-ND1P03886 IRF5P1-201ENST00000504852 2164 ntBASIC4.47□□□□□ -1.69
MT-ND1P03886 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.47□□□□□ -1.69
MT-ND1P03886 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
MT-ND1P03886 MAPK10-286ENST00000641208 8747 ntBASIC4.47□□□□□ -1.69
MT-ND1P03886 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
MT-ND1P03886 SNURFL-201ENST00000309296 343 ntBASIC4.47□□□□□ -1.69
MT-ND1P03886 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
MT-ND1P03886 RNU6-31P-201ENST00000384388 108 ntBASIC4.47□□□□□ -1.69
MT-ND1P03886 MIR223-201ENST00000385204 110 ntBASIC4.47□□□□□ -1.69
MT-ND1P03886 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC4.47□□□□□ -1.69
MT-ND1P03886 Z97832.1-201ENST00000402490 328 ntBASIC4.47□□□□□ -1.69
MT-ND1P03886 AL391361.1-201ENST00000405580 489 ntBASIC4.47□□□□□ -1.69
MT-ND1P03886 RNA5SP498-201ENST00000411342 120 ntBASIC4.47□□□□□ -1.69
MT-ND1P03886 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC4.47□□□□□ -1.69
MT-ND1P03886 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC4.47□□□□□ -1.69
MT-ND1P03886 TRGV6-201ENST00000417928 299 ntBASIC4.47□□□□□ -1.69
MT-ND1P03886 AF186996.5-201ENST00000418098 904 ntBASIC4.47□□□□□ -1.69
MT-ND1P03886 Z74021.1-201ENST00000423610 407 ntBASIC4.47□□□□□ -1.69
MT-ND1P03886 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC4.47□□□□□ -1.69
MT-ND1P03886 AL158073.1-201ENST00000426848 1104 ntBASIC4.47□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms