Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
CLPTM1O96005 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC4.69□□□□□ -1.66
CLPTM1O96005 NDUFB4P11-201ENST00000560510 395 ntBASIC4.69□□□□□ -1.66
CLPTM1O96005 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC4.69□□□□□ -1.66
CLPTM1O96005 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC4.69□□□□□ -1.66
CLPTM1O96005 AC005242.1-201ENST00000585658 438 ntBASIC4.69□□□□□ -1.66
CLPTM1O96005 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.69□□□□□ -1.66
CLPTM1O96005 RPAP2P1-201ENST00000603626 1168 ntBASIC4.69□□□□□ -1.66
CLPTM1O96005 AC097504.2-201ENST00000608088 454 ntBASIC4.69□□□□□ -1.66
CLPTM1O96005 AC118658.2-201ENST00000618697 459 ntBASIC4.69□□□□□ -1.66
CLPTM1O96005 AC022960.3-201ENST00000619794 441 ntBASIC4.69□□□□□ -1.66
CLPTM1O96005 AC023510.2-201ENST00000622162 746 ntBASIC4.69□□□□□ -1.66
CLPTM1O96005 AC004232.3-201ENST00000622977 525 ntBASIC4.69□□□□□ -1.66
CLPTM1O96005 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CLPTM1O96005 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.69□□□□□ -1.66
CLPTM1O96005 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CLPTM1O96005 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CLPTM1O96005 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.69□□□□□ -1.66
CLPTM1O96005 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CLPTM1O96005 AC017104.4-201ENST00000636283 1592 ntBASIC4.69□□□□□ -1.66
CLPTM1O96005 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
CLPTM1O96005 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
CLPTM1O96005 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
CLPTM1O96005 DDX18P5-201ENST00000534547 1306 ntBASIC4.69□□□□□ -1.66
CLPTM1O96005 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC4.69□□□□□ -1.66
CLPTM1O96005 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC4.68□□□□□ -1.66
CLPTM1O96005 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CLPTM1O96005 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.68□□□□□ -1.66
CLPTM1O96005 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC4.68□□□□□ -1.66
CLPTM1O96005 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.68□□□□□ -1.66
CLPTM1O96005 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.68□□□□□ -1.66
CLPTM1O96005 AC017002.4-201ENST00000604721 1525 ntBASIC4.68□□□□□ -1.66
CLPTM1O96005 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.68□□□□□ -1.66
CLPTM1O96005 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CLPTM1O96005 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CLPTM1O96005 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
CLPTM1O96005 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
CLPTM1O96005 RNU1-20P-201ENST00000363314 162 ntBASIC4.68□□□□□ -1.66
CLPTM1O96005 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CLPTM1O96005 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CLPTM1O96005 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
CLPTM1O96005 Z86062.1-201ENST00000406773 777 ntBASIC4.68□□□□□ -1.66
CLPTM1O96005 RNU6ATAC18P-201ENST00000408413 101 ntBASIC4.68□□□□□ -1.66
CLPTM1O96005 STAT4-203ENST00000409995 709 ntTSL 5 BASIC4.68□□□□□ -1.66
CLPTM1O96005 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC4.68□□□□□ -1.66
CLPTM1O96005 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CLPTM1O96005 GLUD1P9-201ENST00000420997 1173 ntBASIC4.68□□□□□ -1.66
CLPTM1O96005 PDSS1P1-201ENST00000422953 1114 ntBASIC4.68□□□□□ -1.66
CLPTM1O96005 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC4.68□□□□□ -1.66
CLPTM1O96005 PTP4A1P3-201ENST00000433661 420 ntBASIC4.68□□□□□ -1.66
CLPTM1O96005 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC4.68□□□□□ -1.66
CLPTM1O96005 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC4.68□□□□□ -1.66
CLPTM1O96005 AC245517.2-201ENST00000442890 346 ntBASIC4.68□□□□□ -1.66
CLPTM1O96005 GEMIN8P3-201ENST00000445417 720 ntBASIC4.68□□□□□ -1.66
CLPTM1O96005 AC105399.1-202ENST00000447303 205 ntBASIC4.68□□□□□ -1.66
CLPTM1O96005 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC4.68□□□□□ -1.66
CLPTM1O96005 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC4.68□□□□□ -1.66
CLPTM1O96005 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC4.68□□□□□ -1.66
CLPTM1O96005 RPL7P45-201ENST00000455851 743 ntBASIC4.68□□□□□ -1.66
CLPTM1O96005 RPL5P30-201ENST00000465511 891 ntBASIC4.68□□□□□ -1.66
CLPTM1O96005 RPS26P39-201ENST00000469206 341 ntBASIC4.68□□□□□ -1.66
CLPTM1O96005 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CLPTM1O96005 UBA52P7-201ENST00000486088 380 ntBASIC4.68□□□□□ -1.66
CLPTM1O96005 AC015864.1-201ENST00000496512 544 ntBASIC4.68□□□□□ -1.66
CLPTM1O96005 NAMPTP2-201ENST00000505629 1115 ntBASIC4.68□□□□□ -1.66
CLPTM1O96005 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CLPTM1O96005 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC4.68□□□□□ -1.66
CLPTM1O96005 BX510359.5-201ENST00000515651 304 ntBASIC4.68□□□□□ -1.66
CLPTM1O96005 AC016550.3-201ENST00000515706 767 ntBASIC4.68□□□□□ -1.66
CLPTM1O96005 SCARNA16.4-201ENST00000516956 187 ntBASIC4.68□□□□□ -1.66
CLPTM1O96005 MTCYBP19-201ENST00000517463 1124 ntBASIC4.68□□□□□ -1.66
CLPTM1O96005 MAL2-201ENST00000522112 573 ntTSL 4 BASIC4.68□□□□□ -1.66
CLPTM1O96005 IGHVIII-67-4-201ENST00000524281 296 ntBASIC4.68□□□□□ -1.66
CLPTM1O96005 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC4.68□□□□□ -1.66
CLPTM1O96005 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC4.68□□□□□ -1.66
CLPTM1O96005 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.68□□□□□ -1.66
CLPTM1O96005 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC4.68□□□□□ -1.66
CLPTM1O96005 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC4.68□□□□□ -1.66
CLPTM1O96005 BLZF2P-201ENST00000553776 1130 ntBASIC4.68□□□□□ -1.66
CLPTM1O96005 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC4.68□□□□□ -1.66
CLPTM1O96005 AP005119.2-201ENST00000579735 1105 ntBASIC4.68□□□□□ -1.66
CLPTM1O96005 MIR3176-201ENST00000582210 90 ntBASIC4.68□□□□□ -1.66
CLPTM1O96005 MIR4760-201ENST00000585040 80 ntBASIC4.68□□□□□ -1.66
CLPTM1O96005 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CLPTM1O96005 AC006116.7-201ENST00000590141 756 ntBASIC4.68□□□□□ -1.66
CLPTM1O96005 FKBP1AP1-201ENST00000594588 318 ntBASIC4.68□□□□□ -1.66
CLPTM1O96005 AP000894.4-201ENST00000610185 483 ntBASIC4.68□□□□□ -1.66
CLPTM1O96005 AL645927.2-201ENST00000618350 349 ntBASIC4.68□□□□□ -1.66
CLPTM1O96005 RMST_5.1-201ENST00000618704 126 ntBASIC4.68□□□□□ -1.66
CLPTM1O96005 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC4.68□□□□□ -1.66
CLPTM1O96005 AC136428.4-201ENST00000634254 1155 ntBASIC4.68□□□□□ -1.66
CLPTM1O96005 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC4.68□□□□□ -1.66
CLPTM1O96005 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
CLPTM1O96005 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CLPTM1O96005 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
CLPTM1O96005 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.68□□□□□ -1.66
CLPTM1O96005 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
CLPTM1O96005 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CLPTM1O96005 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.68□□□□□ -1.66
CLPTM1O96005 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms