Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 U3.23-201ENST00000391132 200 ntBASIC4.77□□□□□ -1.65
NKX2-2O95096 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
NKX2-2O95096 RPL7P27-201ENST00000403775 720 ntBASIC4.77□□□□□ -1.65
NKX2-2O95096 ZNF602P-201ENST00000405929 924 ntBASIC4.77□□□□□ -1.65
NKX2-2O95096 DUTP5-201ENST00000406790 469 ntBASIC4.77□□□□□ -1.65
NKX2-2O95096 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC4.77□□□□□ -1.65
NKX2-2O95096 NPM1P40-201ENST00000412758 733 ntBASIC4.77□□□□□ -1.65
NKX2-2O95096 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC4.77□□□□□ -1.65
NKX2-2O95096 AC246680.2-201ENST00000422106 389 ntBASIC4.77□□□□□ -1.65
NKX2-2O95096 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC4.77□□□□□ -1.65
NKX2-2O95096 MTCO2P23-201ENST00000425216 680 ntBASIC4.77□□□□□ -1.65
NKX2-2O95096 HNRNPA3P4-201ENST00000427514 803 ntBASIC4.77□□□□□ -1.65
NKX2-2O95096 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC4.77□□□□□ -1.65
NKX2-2O95096 AP001324.1-201ENST00000428553 399 ntBASIC4.77□□□□□ -1.65
NKX2-2O95096 AC114973.1-201ENST00000429057 632 ntBASIC4.77□□□□□ -1.65
NKX2-2O95096 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC4.77□□□□□ -1.65
NKX2-2O95096 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
NKX2-2O95096 AL031663.1-201ENST00000437445 219 ntBASIC4.77□□□□□ -1.65
NKX2-2O95096 AC245047.2-201ENST00000441060 530 ntBASIC4.77□□□□□ -1.65
NKX2-2O95096 AC009263.1-201ENST00000441193 1239 ntBASIC4.77□□□□□ -1.65
NKX2-2O95096 PPIAP20-201ENST00000449839 135 ntBASIC4.77□□□□□ -1.65
NKX2-2O95096 CDC42P1-201ENST00000456658 548 ntBASIC4.77□□□□□ -1.65
NKX2-2O95096 AC009127.1-201ENST00000467090 155 ntBASIC4.77□□□□□ -1.65
NKX2-2O95096 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC4.77□□□□□ -1.65
NKX2-2O95096 AC005412.2-201ENST00000492004 341 ntBASIC4.77□□□□□ -1.65
NKX2-2O95096 NIFKP7-201ENST00000503365 834 ntBASIC4.77□□□□□ -1.65
NKX2-2O95096 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
NKX2-2O95096 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC4.77□□□□□ -1.65
NKX2-2O95096 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC4.77□□□□□ -1.65
NKX2-2O95096 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC4.77□□□□□ -1.65
NKX2-2O95096 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC4.77□□□□□ -1.65
NKX2-2O95096 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
NKX2-2O95096 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC4.77□□□□□ -1.65
NKX2-2O95096 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC4.77□□□□□ -1.65
NKX2-2O95096 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC4.77□□□□□ -1.65
NKX2-2O95096 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC4.77□□□□□ -1.65
NKX2-2O95096 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC4.77□□□□□ -1.65
NKX2-2O95096 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC4.77□□□□□ -1.65
NKX2-2O95096 AC013468.1-201ENST00000608680 598 ntBASIC4.77□□□□□ -1.65
NKX2-2O95096 RPSAP73-201ENST00000614820 330 ntBASIC4.77□□□□□ -1.65
NKX2-2O95096 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC4.77□□□□□ -1.65
NKX2-2O95096 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC4.77□□□□□ -1.65
NKX2-2O95096 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC4.77□□□□□ -1.65
NKX2-2O95096 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC4.77□□□□□ -1.65
NKX2-2O95096 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC4.77□□□□□ -1.65
NKX2-2O95096 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC4.77□□□□□ -1.65
NKX2-2O95096 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC4.77□□□□□ -1.65
NKX2-2O95096 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
NKX2-2O95096 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.77□□□□□ -1.65
NKX2-2O95096 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
NKX2-2O95096 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC4.77□□□□□ -1.65
NKX2-2O95096 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
NKX2-2O95096 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
NKX2-2O95096 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
NKX2-2O95096 AC005332.5-201ENST00000591222 2919 ntBASIC4.76□□□□□ -1.65
NKX2-2O95096 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC4.76□□□□□ -1.65
NKX2-2O95096 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC4.76□□□□□ -1.65
NKX2-2O95096 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
NKX2-2O95096 ADAM5-202ENST00000399789 1942 ntBASIC4.76□□□□□ -1.65
NKX2-2O95096 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
NKX2-2O95096 RNU6-1339P-201ENST00000363574 91 ntBASIC4.76□□□□□ -1.65
NKX2-2O95096 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC4.76□□□□□ -1.65
NKX2-2O95096 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
NKX2-2O95096 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
NKX2-2O95096 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
NKX2-2O95096 AL035079.1-201ENST00000405210 287 ntBASIC4.76□□□□□ -1.65
NKX2-2O95096 AL133268.1-201ENST00000405676 1401 ntBASIC4.76□□□□□ -1.65
NKX2-2O95096 MIR1303-201ENST00000408625 86 ntBASIC4.76□□□□□ -1.65
NKX2-2O95096 AC002524.1-201ENST00000411687 547 ntBASIC4.76□□□□□ -1.65
NKX2-2O95096 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC4.76□□□□□ -1.65
NKX2-2O95096 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC4.76□□□□□ -1.65
NKX2-2O95096 TEX41-203ENST00000420472 765 ntTSL 3 BASIC4.76□□□□□ -1.65
NKX2-2O95096 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC4.76□□□□□ -1.65
NKX2-2O95096 OR5AW1P-201ENST00000426334 1006 ntBASIC4.76□□□□□ -1.65
NKX2-2O95096 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
NKX2-2O95096 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC4.76□□□□□ -1.65
NKX2-2O95096 COX6CP13-201ENST00000428703 226 ntBASIC4.76□□□□□ -1.65
NKX2-2O95096 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC4.76□□□□□ -1.65
NKX2-2O95096 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC4.76□□□□□ -1.65
NKX2-2O95096 AC002542.1-201ENST00000440683 193 ntBASIC4.76□□□□□ -1.65
NKX2-2O95096 CYCSP24-201ENST00000445119 316 ntBASIC4.76□□□□□ -1.65
NKX2-2O95096 AL358794.1-201ENST00000445689 381 ntBASIC4.76□□□□□ -1.65
NKX2-2O95096 NPM1P19-201ENST00000450070 712 ntBASIC4.76□□□□□ -1.65
NKX2-2O95096 AL606490.1-201ENST00000452266 765 ntBASIC4.76□□□□□ -1.65
NKX2-2O95096 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC4.76□□□□□ -1.65
NKX2-2O95096 DUXAP8-207ENST00000456786 622 ntBASIC4.76□□□□□ -1.65
NKX2-2O95096 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC4.76□□□□□ -1.65
NKX2-2O95096 AC108729.1-201ENST00000487812 947 ntBASIC4.76□□□□□ -1.65
NKX2-2O95096 AL035404.1-201ENST00000497982 568 ntBASIC4.76□□□□□ -1.65
NKX2-2O95096 ENPP7P11-201ENST00000505915 627 ntBASIC4.76□□□□□ -1.65
NKX2-2O95096 AC010285.3-201ENST00000511668 676 ntBASIC4.76□□□□□ -1.65
NKX2-2O95096 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC4.76□□□□□ -1.65
NKX2-2O95096 SNORA19.3-201ENST00000516165 130 ntBASIC4.76□□□□□ -1.65
NKX2-2O95096 RNU6-1028P-201ENST00000517164 93 ntBASIC4.76□□□□□ -1.65
NKX2-2O95096 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC4.76□□□□□ -1.65
NKX2-2O95096 AC091163.3-201ENST00000518269 1144 ntBASIC4.76□□□□□ -1.65
NKX2-2O95096 AC138832.1-201ENST00000522871 556 ntBASIC4.76□□□□□ -1.65
NKX2-2O95096 MORF4L1P3-201ENST00000525966 950 ntBASIC4.76□□□□□ -1.65
NKX2-2O95096 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
NKX2-2O95096 AL049838.1-201ENST00000563647 981 ntBASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 109.2 ms