Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.68□□□□□ -1.66
SNX3O60493 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
SNX3O60493 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC4.68□□□□□ -1.66
SNX3O60493 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
SNX3O60493 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SNX3O60493 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
SNX3O60493 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.68□□□□□ -1.66
SNX3O60493 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.68□□□□□ -1.66
SNX3O60493 AL355852.1-201ENST00000454081 1771 ntBASIC4.68□□□□□ -1.66
SNX3O60493 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.68□□□□□ -1.66
SNX3O60493 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
SNX3O60493 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SNX3O60493 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.67□□□□□ -1.66
SNX3O60493 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SNX3O60493 OR14L1P-202ENST00000641545 3009 ntBASIC4.67□□□□□ -1.66
SNX3O60493 RNU6-249P-201ENST00000363016 102 ntBASIC4.67□□□□□ -1.66
SNX3O60493 RNA5SP151-201ENST00000365632 117 ntBASIC4.67□□□□□ -1.66
SNX3O60493 RHOT1P2-201ENST00000366423 333 ntBASIC4.67□□□□□ -1.66
SNX3O60493 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
SNX3O60493 VN1R8P-201ENST00000407739 893 ntBASIC4.67□□□□□ -1.66
SNX3O60493 RPL21P43-201ENST00000425440 472 ntBASIC4.67□□□□□ -1.66
SNX3O60493 UBE2D3P3-201ENST00000426992 425 ntBASIC4.67□□□□□ -1.66
SNX3O60493 AL160175.1-201ENST00000428124 247 ntBASIC4.67□□□□□ -1.66
SNX3O60493 AL512661.1-201ENST00000434586 1253 ntBASIC4.67□□□□□ -1.66
SNX3O60493 MTND2P2-201ENST00000434633 945 ntBASIC4.67□□□□□ -1.66
SNX3O60493 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SNX3O60493 TRAPPC13P1-201ENST00000435991 1062 ntBASIC4.67□□□□□ -1.66
SNX3O60493 AC012075.1-201ENST00000436549 580 ntBASIC4.67□□□□□ -1.66
SNX3O60493 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC4.67□□□□□ -1.66
SNX3O60493 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC4.67□□□□□ -1.66
SNX3O60493 YRDCP3-201ENST00000456507 480 ntBASIC4.67□□□□□ -1.66
SNX3O60493 AC096741.1-201ENST00000472250 846 ntBASIC4.67□□□□□ -1.66
SNX3O60493 RN7SL97P-201ENST00000486780 299 ntBASIC4.67□□□□□ -1.66
SNX3O60493 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC4.67□□□□□ -1.66
SNX3O60493 AC025459.1-201ENST00000504072 156 ntBASIC4.67□□□□□ -1.66
SNX3O60493 AC112206.4-201ENST00000515142 405 ntBASIC4.67□□□□□ -1.66
SNX3O60493 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC4.67□□□□□ -1.66
SNX3O60493 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC4.67□□□□□ -1.66
SNX3O60493 AL049870.4-201ENST00000555741 486 ntBASIC4.67□□□□□ -1.66
SNX3O60493 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC4.67□□□□□ -1.66
SNX3O60493 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC4.67□□□□□ -1.66
SNX3O60493 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SNX3O60493 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC4.67□□□□□ -1.66
SNX3O60493 CD24P2-201ENST00000565486 219 ntBASIC4.67□□□□□ -1.66
SNX3O60493 TVP23CP2-201ENST00000571473 623 ntBASIC4.67□□□□□ -1.66
SNX3O60493 AC011487.3-201ENST00000593607 453 ntBASIC4.67□□□□□ -1.66
SNX3O60493 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC4.67□□□□□ -1.66
SNX3O60493 AC008638.3-201ENST00000603341 463 ntBASIC4.67□□□□□ -1.66
SNX3O60493 AL139395.1-201ENST00000603662 160 ntBASIC4.67□□□□□ -1.66
SNX3O60493 AL049844.2-201ENST00000604280 628 ntBASIC4.67□□□□□ -1.66
SNX3O60493 AP004607.9-201ENST00000618202 316 ntBASIC4.67□□□□□ -1.66
SNX3O60493 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
SNX3O60493 AC073592.6-201ENST00000624271 415 ntBASIC4.67□□□□□ -1.66
SNX3O60493 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SNX3O60493 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.67□□□□□ -1.66
SNX3O60493 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
SNX3O60493 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SNX3O60493 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SNX3O60493 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.66□□□□□ -1.66
SNX3O60493 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SNX3O60493 RNU6-666P-201ENST00000363499 107 ntBASIC4.66□□□□□ -1.66
SNX3O60493 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SNX3O60493 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SNX3O60493 SNORA67-201ENST00000384423 137 ntBASIC4.66□□□□□ -1.66
SNX3O60493 RNU6ATAC18P-201ENST00000408413 101 ntBASIC4.66□□□□□ -1.66
SNX3O60493 RN7SKP247-201ENST00000411094 308 ntBASIC4.66□□□□□ -1.66
SNX3O60493 XKRYP4-201ENST00000414395 483 ntBASIC4.66□□□□□ -1.66
SNX3O60493 DPY19L1P2-201ENST00000426647 915 ntBASIC4.66□□□□□ -1.66
SNX3O60493 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC4.66□□□□□ -1.66
SNX3O60493 CYCSP6-201ENST00000434498 302 ntBASIC4.66□□□□□ -1.66
SNX3O60493 RPS17P8-201ENST00000434525 335 ntBASIC4.66□□□□□ -1.66
SNX3O60493 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC4.66□□□□□ -1.66
SNX3O60493 GEMIN8P3-201ENST00000445417 720 ntBASIC4.66□□□□□ -1.66
SNX3O60493 RPS27AP15-201ENST00000447672 466 ntBASIC4.66□□□□□ -1.66
SNX3O60493 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC4.66□□□□□ -1.66
SNX3O60493 XKRYP5-201ENST00000449659 483 ntBASIC4.66□□□□□ -1.66
SNX3O60493 RPS26P41-201ENST00000450370 284 ntBASIC4.66□□□□□ -1.66
SNX3O60493 AC113430.1-201ENST00000506872 718 ntBASIC4.66□□□□□ -1.66
SNX3O60493 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC4.66□□□□□ -1.66
SNX3O60493 AC015795.1-201ENST00000513669 327 ntBASIC4.66□□□□□ -1.66
SNX3O60493 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC4.66□□□□□ -1.66
SNX3O60493 AC011853.1-201ENST00000518911 454 ntBASIC4.66□□□□□ -1.66
SNX3O60493 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.66□□□□□ -1.66
SNX3O60493 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC4.66□□□□□ -1.66
SNX3O60493 UBTFL9-201ENST00000534504 1148 ntBASIC4.66□□□□□ -1.66
SNX3O60493 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC4.66□□□□□ -1.66
SNX3O60493 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC4.66□□□□□ -1.66
SNX3O60493 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC4.66□□□□□ -1.66
SNX3O60493 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC4.66□□□□□ -1.66
SNX3O60493 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC4.66□□□□□ -1.66
SNX3O60493 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC4.66□□□□□ -1.66
SNX3O60493 AF230666.2-201ENST00000602328 725 ntBASIC4.66□□□□□ -1.66
SNX3O60493 AC005034.4-201ENST00000603612 899 ntBASIC4.66□□□□□ -1.66
SNX3O60493 AL591926.8-201ENST00000616876 211 ntBASIC4.66□□□□□ -1.66
SNX3O60493 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.66□□□□□ -1.66
SNX3O60493 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
SNX3O60493 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SNX3O60493 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.66□□□□□ -1.66
SNX3O60493 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
SNX3O60493 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms