Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
LDB2O43679 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC5.05□□□□□ -1.6
LDB2O43679 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC5.05□□□□□ -1.6
LDB2O43679 AC068870.3-201ENST00000625077 2536 ntBASIC5.04□□□□□ -1.6
LDB2O43679 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.04□□□□□ -1.6
LDB2O43679 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
LDB2O43679 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
LDB2O43679 AC011447.7-201ENST00000624228 1590 ntBASIC5.04□□□□□ -1.6
LDB2O43679 AC097063.1-201ENST00000426714 1797 ntBASIC5.04□□□□□ -1.6
LDB2O43679 AC100778.3-201ENST00000580060 1750 ntBASIC5.04□□□□□ -1.6
LDB2O43679 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
LDB2O43679 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
LDB2O43679 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
LDB2O43679 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
LDB2O43679 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
LDB2O43679 LRRC37BP1-201ENST00000398851 714 ntBASIC5.04□□□□□ -1.6
LDB2O43679 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC5.04□□□□□ -1.6
LDB2O43679 AC007738.1-201ENST00000413892 348 ntBASIC5.04□□□□□ -1.6
LDB2O43679 GTF2IP5-201ENST00000414608 731 ntBASIC5.04□□□□□ -1.6
LDB2O43679 MTCYBP7-201ENST00000419540 1134 ntBASIC5.04□□□□□ -1.6
LDB2O43679 TEX41-203ENST00000420472 765 ntTSL 3 BASIC5.04□□□□□ -1.6
LDB2O43679 AC104333.2-201ENST00000422630 192 ntBASIC5.04□□□□□ -1.6
LDB2O43679 ZNF736P7Y-201ENST00000425158 820 ntBASIC5.04□□□□□ -1.6
LDB2O43679 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC5.04□□□□□ -1.6
LDB2O43679 RHOT1P3-201ENST00000436571 331 ntBASIC5.04□□□□□ -1.6
LDB2O43679 RPL12P3-201ENST00000440080 396 ntBASIC5.04□□□□□ -1.6
LDB2O43679 MRPL35P2-201ENST00000448009 511 ntBASIC5.04□□□□□ -1.6
LDB2O43679 AL031313.1-201ENST00000448435 256 ntBASIC5.04□□□□□ -1.6
LDB2O43679 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC5.04□□□□□ -1.6
LDB2O43679 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC5.04□□□□□ -1.6
LDB2O43679 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC5.04□□□□□ -1.6
LDB2O43679 TCEA1P1-201ENST00000449716 880 ntBASIC5.04□□□□□ -1.6
LDB2O43679 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC5.04□□□□□ -1.6
LDB2O43679 AL691482.1-201ENST00000453255 87 ntBASIC5.04□□□□□ -1.6
LDB2O43679 TPT1P1-201ENST00000458495 518 ntBASIC5.04□□□□□ -1.6
LDB2O43679 SSR3-206ENST00000476217 807 ntTSL 3 BASIC5.04□□□□□ -1.6
LDB2O43679 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC5.04□□□□□ -1.6
LDB2O43679 HMGN2P25-201ENST00000486956 268 ntBASIC5.04□□□□□ -1.6
LDB2O43679 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC5.04□□□□□ -1.6
LDB2O43679 RFESD-208ENST00000513950 464 ntTSL 5 BASIC5.04□□□□□ -1.6
LDB2O43679 RNU6-276P-201ENST00000516114 96 ntBASIC5.04□□□□□ -1.6
LDB2O43679 RN7SKP66-201ENST00000516681 231 ntBASIC5.04□□□□□ -1.6
LDB2O43679 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC5.04□□□□□ -1.6
LDB2O43679 AC105031.1-201ENST00000518550 476 ntBASIC5.04□□□□□ -1.6
LDB2O43679 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC5.04□□□□□ -1.6
LDB2O43679 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC5.04□□□□□ -1.6
LDB2O43679 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC5.04□□□□□ -1.6
LDB2O43679 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC5.04□□□□□ -1.6
LDB2O43679 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC5.04□□□□□ -1.6
LDB2O43679 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC5.04□□□□□ -1.6
LDB2O43679 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC5.04□□□□□ -1.6
LDB2O43679 AC002069.2-201ENST00000603580 883 ntBASIC5.04□□□□□ -1.6
LDB2O43679 AC093673.2-201ENST00000609674 331 ntBASIC5.04□□□□□ -1.6
LDB2O43679 AC245100.7-201ENST00000609678 442 ntBASIC5.04□□□□□ -1.6
LDB2O43679 MAPK10-338ENST00000641647 3362 ntBASIC5.04□□□□□ -1.6
LDB2O43679 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5.04□□□□□ -1.6
LDB2O43679 AC006484.1-201ENST00000435086 1884 ntBASIC5.04□□□□□ -1.6
LDB2O43679 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC5.04□□□□□ -1.6
LDB2O43679 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
LDB2O43679 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
LDB2O43679 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC5.04□□□□□ -1.6
LDB2O43679 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
LDB2O43679 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
LDB2O43679 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.03□□□□□ -1.6
LDB2O43679 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC5.03□□□□□ -1.6
LDB2O43679 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
LDB2O43679 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
LDB2O43679 THAP12P4-201ENST00000528321 2266 ntBASIC5.03□□□□□ -1.6
LDB2O43679 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC5.03□□□□□ -1.6
LDB2O43679 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC5.03□□□□□ -1.6
LDB2O43679 AP005435.3-201ENST00000531260 3198 ntBASIC5.03□□□□□ -1.6
LDB2O43679 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.03□□□□□ -1.6
LDB2O43679 ZNF29P-201ENST00000225587 168 ntBASIC5.03□□□□□ -1.6
LDB2O43679 RNU1-106P-201ENST00000384382 164 ntBASIC5.03□□□□□ -1.6
LDB2O43679 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC5.03□□□□□ -1.6
LDB2O43679 AL445183.3-201ENST00000414168 502 ntBASIC5.03□□□□□ -1.6
LDB2O43679 AC008173.1-201ENST00000418901 264 ntBASIC5.03□□□□□ -1.6
LDB2O43679 AC093162.1-201ENST00000419682 124 ntBASIC5.03□□□□□ -1.6
LDB2O43679 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC5.03□□□□□ -1.6
LDB2O43679 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC5.03□□□□□ -1.6
LDB2O43679 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
LDB2O43679 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC5.03□□□□□ -1.6
LDB2O43679 MTCYBP29-201ENST00000436327 1006 ntBASIC5.03□□□□□ -1.6
LDB2O43679 RPL35AP21-201ENST00000437667 333 ntBASIC5.03□□□□□ -1.6
LDB2O43679 AL157827.1-201ENST00000447622 132 ntBASIC5.03□□□□□ -1.6
LDB2O43679 OTX2P1-201ENST00000450956 354 ntBASIC5.03□□□□□ -1.6
LDB2O43679 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC5.03□□□□□ -1.6
LDB2O43679 AC073073.1-201ENST00000493920 463 ntBASIC5.03□□□□□ -1.6
LDB2O43679 RN7SKP287-201ENST00000516546 266 ntBASIC5.03□□□□□ -1.6
LDB2O43679 RNA5SP43-201ENST00000516559 110 ntBASIC5.03□□□□□ -1.6
LDB2O43679 RN7SKP260-201ENST00000516907 149 ntBASIC5.03□□□□□ -1.6
LDB2O43679 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC5.03□□□□□ -1.6
LDB2O43679 AP006245.2-201ENST00000522004 300 ntBASIC5.03□□□□□ -1.6
LDB2O43679 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC5.03□□□□□ -1.6
LDB2O43679 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC5.03□□□□□ -1.6
LDB2O43679 AC139103.1-201ENST00000534696 1030 ntBASIC5.03□□□□□ -1.6
LDB2O43679 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC5.03□□□□□ -1.6
LDB2O43679 LRRC34P1-201ENST00000542742 915 ntBASIC5.03□□□□□ -1.6
LDB2O43679 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC5.03□□□□□ -1.6
LDB2O43679 AL132857.1-201ENST00000555180 708 ntBASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 84.9 ms