Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC5.38□□□□□ -1.55
PROM1O43490 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC5.38□□□□□ -1.55
PROM1O43490 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC5.38□□□□□ -1.55
PROM1O43490 IGKV1OR2-9-201ENST00000603957 287 ntBASIC5.38□□□□□ -1.55
PROM1O43490 IGKV1OR2-11-201ENST00000604120 287 ntBASIC5.38□□□□□ -1.55
PROM1O43490 AC021749.1-201ENST00000604322 607 ntBASIC5.38□□□□□ -1.55
PROM1O43490 AC013468.1-201ENST00000608680 598 ntBASIC5.38□□□□□ -1.55
PROM1O43490 AL122125.1-201ENST00000616999 600 ntBASIC5.38□□□□□ -1.55
PROM1O43490 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
PROM1O43490 AC021106.3-201ENST00000623925 531 ntBASIC5.38□□□□□ -1.55
PROM1O43490 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC5.38□□□□□ -1.55
PROM1O43490 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
PROM1O43490 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.38□□□□□ -1.55
PROM1O43490 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
PROM1O43490 ZNF736P9Y-201ENST00000439586 1345 ntBASIC5.38□□□□□ -1.55
PROM1O43490 HSPA8P17-201ENST00000427029 1382 ntBASIC5.38□□□□□ -1.55
PROM1O43490 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC5.38□□□□□ -1.55
PROM1O43490 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC5.38□□□□□ -1.55
PROM1O43490 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.38□□□□□ -1.55
PROM1O43490 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC5.38□□□□□ -1.55
PROM1O43490 AC106872.5-201ENST00000508856 1416 ntBASIC5.38□□□□□ -1.55
PROM1O43490 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC5.38□□□□□ -1.55
PROM1O43490 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
PROM1O43490 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.38□□□□□ -1.55
PROM1O43490 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
PROM1O43490 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
PROM1O43490 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC5.38□□□□□ -1.55
PROM1O43490 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC5.37□□□□□ -1.55
PROM1O43490 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.37□□□□□ -1.55
PROM1O43490 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.37□□□□□ -1.55
PROM1O43490 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
PROM1O43490 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC5.37□□□□□ -1.55
PROM1O43490 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC5.37□□□□□ -1.55
PROM1O43490 RNA5SP27-201ENST00000363839 119 ntBASIC5.37□□□□□ -1.55
PROM1O43490 RNU4-24P-201ENST00000364565 139 ntBASIC5.37□□□□□ -1.55
PROM1O43490 SNORD116.1-201ENST00000365628 92 ntBASIC5.37□□□□□ -1.55
PROM1O43490 Y_RNA.505-201ENST00000384489 102 ntBASIC5.37□□□□□ -1.55
PROM1O43490 RN7SKP286-201ENST00000410894 299 ntBASIC5.37□□□□□ -1.55
PROM1O43490 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC5.37□□□□□ -1.55
PROM1O43490 RNF10P1-201ENST00000418589 369 ntBASIC5.37□□□□□ -1.55
PROM1O43490 HMGN2P27-201ENST00000427352 270 ntBASIC5.37□□□□□ -1.55
PROM1O43490 FO393419.3-201ENST00000428741 282 ntBASIC5.37□□□□□ -1.55
PROM1O43490 TEX41-206ENST00000432608 661 ntTSL 3 BASIC5.37□□□□□ -1.55
PROM1O43490 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC5.37□□□□□ -1.55
PROM1O43490 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC5.37□□□□□ -1.55
PROM1O43490 AP000936.3-201ENST00000438127 255 ntBASIC5.37□□□□□ -1.55
PROM1O43490 AC092393.1-201ENST00000439625 742 ntBASIC5.37□□□□□ -1.55
PROM1O43490 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.37□□□□□ -1.55
PROM1O43490 EEF1B2P5-201ENST00000444820 548 ntBASIC5.37□□□□□ -1.55
PROM1O43490 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC5.37□□□□□ -1.55
PROM1O43490 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
PROM1O43490 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC5.37□□□□□ -1.55
PROM1O43490 CALM1P2-201ENST00000452941 448 ntBASIC5.37□□□□□ -1.55
PROM1O43490 ANKRD26P4-201ENST00000455755 950 ntBASIC5.37□□□□□ -1.55
PROM1O43490 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC5.37□□□□□ -1.55
PROM1O43490 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
PROM1O43490 LAMTOR3P2-201ENST00000504479 232 ntBASIC5.37□□□□□ -1.55
PROM1O43490 OR5H4P-201ENST00000510851 923 ntBASIC5.37□□□□□ -1.55
PROM1O43490 GAPDHP62-201ENST00000515313 990 ntBASIC5.37□□□□□ -1.55
PROM1O43490 FABP5P12-201ENST00000515543 389 ntBASIC5.37□□□□□ -1.55
PROM1O43490 MTCYBP19-201ENST00000517463 1124 ntBASIC5.37□□□□□ -1.55
PROM1O43490 HMGB1P42-201ENST00000532126 553 ntBASIC5.37□□□□□ -1.55
PROM1O43490 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC5.37□□□□□ -1.55
PROM1O43490 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.37□□□□□ -1.55
PROM1O43490 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC5.37□□□□□ -1.55
PROM1O43490 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC5.37□□□□□ -1.55
PROM1O43490 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC5.37□□□□□ -1.55
PROM1O43490 CYP2C60P-201ENST00000566088 139 ntBASIC5.37□□□□□ -1.55
PROM1O43490 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC5.37□□□□□ -1.55
PROM1O43490 CASC22-201ENST00000569713 386 ntTSL 5 BASIC5.37□□□□□ -1.55
PROM1O43490 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC5.37□□□□□ -1.55
PROM1O43490 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC5.37□□□□□ -1.55
PROM1O43490 VN1R83P-201ENST00000595685 445 ntBASIC5.37□□□□□ -1.55
PROM1O43490 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC5.37□□□□□ -1.55
PROM1O43490 AC135507.1-201ENST00000607214 561 ntBASIC5.37□□□□□ -1.55
PROM1O43490 RN7SL787P-201ENST00000613000 284 ntBASIC5.37□□□□□ -1.55
PROM1O43490 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
PROM1O43490 AL356274.1-201ENST00000617064 410 ntBASIC5.37□□□□□ -1.55
PROM1O43490 AP005431.1-201ENST00000618479 319 ntBASIC5.37□□□□□ -1.55
PROM1O43490 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
PROM1O43490 AP001005.3-201ENST00000622049 129 ntBASIC5.37□□□□□ -1.55
PROM1O43490 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC5.37□□□□□ -1.55
PROM1O43490 AC017007.4-201ENST00000503353 1352 ntBASIC5.37□□□□□ -1.55
PROM1O43490 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
PROM1O43490 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
PROM1O43490 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
PROM1O43490 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.37□□□□□ -1.55
PROM1O43490 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.36□□□□□ -1.55
PROM1O43490 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC5.36□□□□□ -1.55
PROM1O43490 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
PROM1O43490 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.36□□□□□ -1.55
PROM1O43490 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC5.36□□□□□ -1.55
PROM1O43490 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC5.36□□□□□ -1.55
PROM1O43490 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
PROM1O43490 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC5.36□□□□□ -1.55
PROM1O43490 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
PROM1O43490 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.36□□□□□ -1.55
PROM1O43490 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
PROM1O43490 NACA3P-201ENST00000359690 648 ntBASIC5.36□□□□□ -1.55
PROM1O43490 SNORA64.1-201ENST00000362600 132 ntBASIC5.36□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms