Protein–RNA interactions for Protein: O00501

CLDN5, Claudin-5, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN5O00501 AC109635.6-201ENST00000525487 1113 ntBASIC4.81□□□□□ -1.64
CLDN5O00501 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.81□□□□□ -1.64
CLDN5O00501 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
CLDN5O00501 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC4.81□□□□□ -1.64
CLDN5O00501 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC4.81□□□□□ -1.64
CLDN5O00501 AC115286.1-201ENST00000604298 434 ntBASIC4.81□□□□□ -1.64
CLDN5O00501 AC020634.1-201ENST00000608701 549 ntBASIC4.81□□□□□ -1.64
CLDN5O00501 AC019193.2-201ENST00000610012 634 ntBASIC4.81□□□□□ -1.64
CLDN5O00501 MIR378J-201ENST00000611988 109 ntBASIC4.81□□□□□ -1.64
CLDN5O00501 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CLDN5O00501 AL121873.1-201ENST00000616013 524 ntBASIC4.81□□□□□ -1.64
CLDN5O00501 AC002044.3-201ENST00000623314 541 ntBASIC4.81□□□□□ -1.64
CLDN5O00501 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC4.81□□□□□ -1.64
CLDN5O00501 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.81□□□□□ -1.64
CLDN5O00501 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.81□□□□□ -1.64
CLDN5O00501 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CLDN5O00501 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC4.81□□□□□ -1.64
CLDN5O00501 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
CLDN5O00501 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.81□□□□□ -1.64
CLDN5O00501 OR56B2P-202ENST00000641377 2453 ntBASIC4.81□□□□□ -1.64
CLDN5O00501 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC4.81□□□□□ -1.64
CLDN5O00501 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
CLDN5O00501 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
CLDN5O00501 AL606537.1-201ENST00000607258 2011 ntBASIC4.8□□□□□ -1.64
CLDN5O00501 STX3-208ENST00000641815 3236 ntBASIC4.8□□□□□ -1.64
CLDN5O00501 AC007342.9-201ENST00000623877 1385 ntBASIC4.8□□□□□ -1.64
CLDN5O00501 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CLDN5O00501 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
CLDN5O00501 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CLDN5O00501 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CLDN5O00501 OR56B2P-201ENST00000317102 954 ntBASIC4.8□□□□□ -1.64
CLDN5O00501 RNU4-39P-201ENST00000362455 127 ntBASIC4.8□□□□□ -1.64
CLDN5O00501 AC240504.1-201ENST00000395709 845 ntBASIC4.8□□□□□ -1.64
CLDN5O00501 SNRPFP1-201ENST00000414761 252 ntBASIC4.8□□□□□ -1.64
CLDN5O00501 OR51A6P-201ENST00000418680 1004 ntBASIC4.8□□□□□ -1.64
CLDN5O00501 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC4.8□□□□□ -1.64
CLDN5O00501 AJ239321.1-201ENST00000424255 564 ntBASIC4.8□□□□□ -1.64
CLDN5O00501 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC4.8□□□□□ -1.64
CLDN5O00501 AC016712.1-201ENST00000431088 378 ntBASIC4.8□□□□□ -1.64
CLDN5O00501 Z85994.2-201ENST00000434327 452 ntBASIC4.8□□□□□ -1.64
CLDN5O00501 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC4.8□□□□□ -1.64
CLDN5O00501 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC4.8□□□□□ -1.64
CLDN5O00501 RPL31P20-201ENST00000449593 360 ntBASIC4.8□□□□□ -1.64
CLDN5O00501 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC4.8□□□□□ -1.64
CLDN5O00501 HSPE1P22-201ENST00000456856 327 ntBASIC4.8□□□□□ -1.64
CLDN5O00501 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC4.8□□□□□ -1.64
CLDN5O00501 MTND3P6-201ENST00000485242 339 ntBASIC4.8□□□□□ -1.64
CLDN5O00501 NPM1P28-201ENST00000492269 840 ntBASIC4.8□□□□□ -1.64
CLDN5O00501 ATG10-AS1-201ENST00000504846 648 ntBASIC4.8□□□□□ -1.64
CLDN5O00501 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC4.8□□□□□ -1.64
CLDN5O00501 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CLDN5O00501 IGLVIV-65-201ENST00000517313 360 ntBASIC4.8□□□□□ -1.64
CLDN5O00501 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC4.8□□□□□ -1.64
CLDN5O00501 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC4.8□□□□□ -1.64
CLDN5O00501 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC4.8□□□□□ -1.64
CLDN5O00501 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC4.8□□□□□ -1.64
CLDN5O00501 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC4.8□□□□□ -1.64
CLDN5O00501 COX6CP4-201ENST00000605798 228 ntBASIC4.8□□□□□ -1.64
CLDN5O00501 MIR8069-1-201ENST00000616627 86 ntBASIC4.8□□□□□ -1.64
CLDN5O00501 RMST_5.1-201ENST00000618704 126 ntBASIC4.8□□□□□ -1.64
CLDN5O00501 MIR8069-2-201ENST00000621412 86 ntBASIC4.8□□□□□ -1.64
CLDN5O00501 LINC01808-202ENST00000641680 1116 ntBASIC4.8□□□□□ -1.64
CLDN5O00501 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CLDN5O00501 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CLDN5O00501 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
CLDN5O00501 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CLDN5O00501 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.79□□□□□ -1.64
CLDN5O00501 AP001284.1-201ENST00000528393 2118 ntBASIC4.79□□□□□ -1.64
CLDN5O00501 AC087565.3-202ENST00000642085 1603 ntBASIC4.79□□□□□ -1.64
CLDN5O00501 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC4.79□□□□□ -1.64
CLDN5O00501 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CLDN5O00501 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
CLDN5O00501 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC4.79□□□□□ -1.64
CLDN5O00501 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CLDN5O00501 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CLDN5O00501 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.79□□□□□ -1.64
CLDN5O00501 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
CLDN5O00501 RNU6-618P-201ENST00000363518 112 ntBASIC4.79□□□□□ -1.64
CLDN5O00501 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
CLDN5O00501 RPL23AP59-201ENST00000399415 461 ntBASIC4.79□□□□□ -1.64
CLDN5O00501 RPL5P19-201ENST00000404228 893 ntBASIC4.79□□□□□ -1.64
CLDN5O00501 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.79□□□□□ -1.64
CLDN5O00501 NPM1P26-201ENST00000426339 738 ntBASIC4.79□□□□□ -1.64
CLDN5O00501 MAPRE1P3-201ENST00000435438 796 ntBASIC4.79□□□□□ -1.64
CLDN5O00501 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC4.79□□□□□ -1.64
CLDN5O00501 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.79□□□□□ -1.64
CLDN5O00501 RN7SL481P-201ENST00000477764 299 ntBASIC4.79□□□□□ -1.64
CLDN5O00501 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CLDN5O00501 AC069304.1-201ENST00000491593 704 ntBASIC4.79□□□□□ -1.64
CLDN5O00501 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC4.79□□□□□ -1.64
CLDN5O00501 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC4.79□□□□□ -1.64
CLDN5O00501 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC4.79□□□□□ -1.64
CLDN5O00501 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC4.79□□□□□ -1.64
CLDN5O00501 OR8G5-201ENST00000524943 1041 ntBASIC4.79□□□□□ -1.64
CLDN5O00501 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC4.79□□□□□ -1.64
CLDN5O00501 LSM3P2-201ENST00000551246 273 ntBASIC4.79□□□□□ -1.64
CLDN5O00501 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC4.79□□□□□ -1.64
CLDN5O00501 MIR4277-201ENST00000578298 84 ntBASIC4.79□□□□□ -1.64
CLDN5O00501 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC4.79□□□□□ -1.64
CLDN5O00501 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 86.7 ms