Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 CDV3-208ENST00000511392 554 ntTSL 5 BASIC4.27□□□□□ -1.73
UPK1AO00322 RNU6-943P-201ENST00000516960 98 ntBASIC4.27□□□□□ -1.73
UPK1AO00322 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.27□□□□□ -1.73
UPK1AO00322 AC008147.3-201ENST00000548666 354 ntBASIC4.27□□□□□ -1.73
UPK1AO00322 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC4.27□□□□□ -1.73
UPK1AO00322 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC4.27□□□□□ -1.73
UPK1AO00322 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC4.27□□□□□ -1.73
UPK1AO00322 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC4.27□□□□□ -1.73
UPK1AO00322 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC4.27□□□□□ -1.73
UPK1AO00322 ADAD1P2-201ENST00000588476 646 ntBASIC4.27□□□□□ -1.73
UPK1AO00322 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.27□□□□□ -1.73
UPK1AO00322 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
UPK1AO00322 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
UPK1AO00322 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.27□□□□□ -1.73
UPK1AO00322 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.27□□□□□ -1.73
UPK1AO00322 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC4.27□□□□□ -1.73
UPK1AO00322 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
UPK1AO00322 CDC27P2-201ENST00000425026 1922 ntBASIC4.27□□□□□ -1.73
UPK1AO00322 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
UPK1AO00322 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
UPK1AO00322 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
UPK1AO00322 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
UPK1AO00322 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC4.26□□□□□ -1.73
UPK1AO00322 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
UPK1AO00322 RN7SKP106-201ENST00000410832 272 ntBASIC4.26□□□□□ -1.73
UPK1AO00322 AL034379.1-201ENST00000423216 253 ntBASIC4.26□□□□□ -1.73
UPK1AO00322 AC244033.1-201ENST00000426826 870 ntBASIC4.26□□□□□ -1.73
UPK1AO00322 BRWD1P3-201ENST00000428816 390 ntBASIC4.26□□□□□ -1.73
UPK1AO00322 USP9YP9-201ENST00000429406 715 ntBASIC4.26□□□□□ -1.73
UPK1AO00322 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC4.26□□□□□ -1.73
UPK1AO00322 HLA-N-201ENST00000437516 135 ntBASIC4.26□□□□□ -1.73
UPK1AO00322 YWHAZP2-201ENST00000440317 728 ntBASIC4.26□□□□□ -1.73
UPK1AO00322 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC4.26□□□□□ -1.73
UPK1AO00322 RPL12P20-201ENST00000475538 479 ntBASIC4.26□□□□□ -1.73
UPK1AO00322 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
UPK1AO00322 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC4.26□□□□□ -1.73
UPK1AO00322 RNA5SP154-201ENST00000516193 111 ntBASIC4.26□□□□□ -1.73
UPK1AO00322 MYL12AP1-201ENST00000518490 515 ntBASIC4.26□□□□□ -1.73
UPK1AO00322 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC4.26□□□□□ -1.73
UPK1AO00322 AC008126.1-201ENST00000549019 480 ntBASIC4.26□□□□□ -1.73
UPK1AO00322 MTND2P17-201ENST00000550281 688 ntBASIC4.26□□□□□ -1.73
UPK1AO00322 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC4.26□□□□□ -1.73
UPK1AO00322 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.26□□□□□ -1.73
UPK1AO00322 RN7SL690P-201ENST00000582087 240 ntBASIC4.26□□□□□ -1.73
UPK1AO00322 BNIP3P32-201ENST00000600015 554 ntBASIC4.26□□□□□ -1.73
UPK1AO00322 AL139395.1-201ENST00000603662 160 ntBASIC4.26□□□□□ -1.73
UPK1AO00322 AL133338.2-201ENST00000604292 736 ntBASIC4.26□□□□□ -1.73
UPK1AO00322 AC024940.4-201ENST00000605507 246 ntBASIC4.26□□□□□ -1.73
UPK1AO00322 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC4.26□□□□□ -1.73
UPK1AO00322 AC091905.2-201ENST00000623143 306 ntBASIC4.26□□□□□ -1.73
UPK1AO00322 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC4.26□□□□□ -1.73
UPK1AO00322 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
UPK1AO00322 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.26□□□□□ -1.73
UPK1AO00322 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
UPK1AO00322 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
UPK1AO00322 SCN1A-220ENST00000641603 12506 ntBASIC4.26□□□□□ -1.73
UPK1AO00322 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
UPK1AO00322 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
UPK1AO00322 OR14L1P-202ENST00000641545 3009 ntBASIC4.25□□□□□ -1.73
UPK1AO00322 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
UPK1AO00322 RHOT1P2-201ENST00000366423 333 ntBASIC4.25□□□□□ -1.73
UPK1AO00322 RNU1-44P-201ENST00000384453 163 ntBASIC4.25□□□□□ -1.73
UPK1AO00322 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
UPK1AO00322 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.25□□□□□ -1.73
UPK1AO00322 OR1F12-201ENST00000402365 945 ntBASIC4.25□□□□□ -1.73
UPK1AO00322 AL133270.1-201ENST00000402635 279 ntBASIC4.25□□□□□ -1.73
UPK1AO00322 AC233289.1-201ENST00000403700 508 ntBASIC4.25□□□□□ -1.73
UPK1AO00322 AL049697.2-201ENST00000403708 294 ntBASIC4.25□□□□□ -1.73
UPK1AO00322 AL589994.1-201ENST00000404962 340 ntBASIC4.25□□□□□ -1.73
UPK1AO00322 UBTFL3-201ENST00000418934 1024 ntBASIC4.25□□□□□ -1.73
UPK1AO00322 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC4.25□□□□□ -1.73
UPK1AO00322 AL049745.1-201ENST00000433953 286 ntBASIC4.25□□□□□ -1.73
UPK1AO00322 AL359265.2-201ENST00000434367 631 ntBASIC4.25□□□□□ -1.73
UPK1AO00322 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC4.25□□□□□ -1.73
UPK1AO00322 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC4.25□□□□□ -1.73
UPK1AO00322 HCG17-214ENST00000453558 732 ntTSL 5 BASIC4.25□□□□□ -1.73
UPK1AO00322 SEPT14P1-201ENST00000458703 648 ntBASIC4.25□□□□□ -1.73
UPK1AO00322 AC010326.1-201ENST00000462726 602 ntBASIC4.25□□□□□ -1.73
UPK1AO00322 AP002371.1-201ENST00000463604 433 ntBASIC4.25□□□□□ -1.73
UPK1AO00322 UBTFL6-201ENST00000477929 1024 ntBASIC4.25□□□□□ -1.73
UPK1AO00322 AC113430.1-201ENST00000506872 718 ntBASIC4.25□□□□□ -1.73
UPK1AO00322 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC4.25□□□□□ -1.73
UPK1AO00322 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC4.25□□□□□ -1.73
UPK1AO00322 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC4.25□□□□□ -1.73
UPK1AO00322 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.25□□□□□ -1.73
UPK1AO00322 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC4.25□□□□□ -1.73
UPK1AO00322 MIR4270-201ENST00000581799 70 ntBASIC4.25□□□□□ -1.73
UPK1AO00322 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
UPK1AO00322 AC124856.1-201ENST00000600819 896 ntBASIC4.25□□□□□ -1.73
UPK1AO00322 AC087468.1-201ENST00000604365 630 ntBASIC4.25□□□□□ -1.73
UPK1AO00322 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC4.25□□□□□ -1.73
UPK1AO00322 AF117829.2-201ENST00000619538 361 ntBASIC4.25□□□□□ -1.73
UPK1AO00322 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
UPK1AO00322 AP001784.1-201ENST00000624107 428 ntBASIC4.25□□□□□ -1.73
UPK1AO00322 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
UPK1AO00322 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
UPK1AO00322 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
UPK1AO00322 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.25□□□□□ -1.73
UPK1AO00322 AC125257.1-201ENST00000560400 2930 ntBASIC4.25□□□□□ -1.73
UPK1AO00322 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms