Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 API5-210ENST00000534600 1760 ntTSL 5 BASIC4.81□□□□□ -1.64
SMIM28A0A1B0GU29 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
SMIM28A0A1B0GU29 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SMIM28A0A1B0GU29 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC4.8□□□□□ -1.64
SMIM28A0A1B0GU29 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SMIM28A0A1B0GU29 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SMIM28A0A1B0GU29 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SMIM28A0A1B0GU29 OR51H2P-202ENST00000641424 3046 ntBASIC4.8□□□□□ -1.64
SMIM28A0A1B0GU29 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC4.8□□□□□ -1.64
SMIM28A0A1B0GU29 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SMIM28A0A1B0GU29 MIR3065-201ENST00000390137 79 ntBASIC4.8□□□□□ -1.64
SMIM28A0A1B0GU29 FABP12P1-201ENST00000401911 322 ntBASIC4.8□□□□□ -1.64
SMIM28A0A1B0GU29 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SMIM28A0A1B0GU29 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SMIM28A0A1B0GU29 ARAFP1-201ENST00000422172 605 ntBASIC4.8□□□□□ -1.64
SMIM28A0A1B0GU29 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC4.8□□□□□ -1.64
SMIM28A0A1B0GU29 RPL21P91-201ENST00000429231 479 ntBASIC4.8□□□□□ -1.64
SMIM28A0A1B0GU29 DAP3-209ENST00000465375 729 ntTSL 2 BASIC4.8□□□□□ -1.64
SMIM28A0A1B0GU29 AC010618.1-201ENST00000469924 477 ntBASIC4.8□□□□□ -1.64
SMIM28A0A1B0GU29 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SMIM28A0A1B0GU29 AC091544.1-201ENST00000484702 348 ntBASIC4.8□□□□□ -1.64
SMIM28A0A1B0GU29 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC4.8□□□□□ -1.64
SMIM28A0A1B0GU29 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC4.8□□□□□ -1.64
SMIM28A0A1B0GU29 AC106806.2-201ENST00000509365 500 ntBASIC4.8□□□□□ -1.64
SMIM28A0A1B0GU29 RNA5SP446-201ENST00000515955 82 ntBASIC4.8□□□□□ -1.64
SMIM28A0A1B0GU29 SNORD116-30-201ENST00000516468 85 ntBASIC4.8□□□□□ -1.64
SMIM28A0A1B0GU29 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC4.8□□□□□ -1.64
SMIM28A0A1B0GU29 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.8□□□□□ -1.64
SMIM28A0A1B0GU29 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC4.8□□□□□ -1.64
SMIM28A0A1B0GU29 PARP1P2-201ENST00000556806 195 ntBASIC4.8□□□□□ -1.64
SMIM28A0A1B0GU29 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC4.8□□□□□ -1.64
SMIM28A0A1B0GU29 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC4.8□□□□□ -1.64
SMIM28A0A1B0GU29 AC136624.4-201ENST00000573044 370 ntBASIC4.8□□□□□ -1.64
SMIM28A0A1B0GU29 MIR3138-201ENST00000585238 82 ntBASIC4.8□□□□□ -1.64
SMIM28A0A1B0GU29 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.8□□□□□ -1.64
SMIM28A0A1B0GU29 AL731566.2-201ENST00000618971 317 ntBASIC4.8□□□□□ -1.64
SMIM28A0A1B0GU29 AC073869.7-201ENST00000640874 297 ntBASIC4.8□□□□□ -1.64
SMIM28A0A1B0GU29 OR52H1-202ENST00000641796 1061 ntBASIC4.8□□□□□ -1.64
SMIM28A0A1B0GU29 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SMIM28A0A1B0GU29 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SMIM28A0A1B0GU29 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SMIM28A0A1B0GU29 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SMIM28A0A1B0GU29 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SMIM28A0A1B0GU29 NXPH1-205ENST00000602349 1953 ntBASIC4.8□□□□□ -1.64
SMIM28A0A1B0GU29 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
SMIM28A0A1B0GU29 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SMIM28A0A1B0GU29 ANAPC1P1-201ENST00000426186 2145 ntBASIC4.79□□□□□ -1.64
SMIM28A0A1B0GU29 MFSD8-242ENST00000641690 4199 ntBASIC4.79□□□□□ -1.64
SMIM28A0A1B0GU29 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
SMIM28A0A1B0GU29 MIR331-201ENST00000362302 94 ntBASIC4.79□□□□□ -1.64
SMIM28A0A1B0GU29 RNA5SP151-201ENST00000365632 117 ntBASIC4.79□□□□□ -1.64
SMIM28A0A1B0GU29 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC4.79□□□□□ -1.64
SMIM28A0A1B0GU29 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC4.79□□□□□ -1.64
SMIM28A0A1B0GU29 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
SMIM28A0A1B0GU29 AC007068.1-201ENST00000396690 844 ntBASIC4.79□□□□□ -1.64
SMIM28A0A1B0GU29 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC4.79□□□□□ -1.64
SMIM28A0A1B0GU29 MIR921-201ENST00000401133 56 ntBASIC4.79□□□□□ -1.64
SMIM28A0A1B0GU29 AL049693.1-201ENST00000402760 611 ntBASIC4.79□□□□□ -1.64
SMIM28A0A1B0GU29 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC4.79□□□□□ -1.64
SMIM28A0A1B0GU29 RSL24D1P6-201ENST00000426934 401 ntBASIC4.79□□□□□ -1.64
SMIM28A0A1B0GU29 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC4.79□□□□□ -1.64
SMIM28A0A1B0GU29 AC109327.1-201ENST00000471666 403 ntBASIC4.79□□□□□ -1.64
SMIM28A0A1B0GU29 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC4.79□□□□□ -1.64
SMIM28A0A1B0GU29 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC4.79□□□□□ -1.64
SMIM28A0A1B0GU29 PRELID3BP5-201ENST00000508612 460 ntBASIC4.79□□□□□ -1.64
SMIM28A0A1B0GU29 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC4.79□□□□□ -1.64
SMIM28A0A1B0GU29 RNA5SP497-201ENST00000516081 97 ntBASIC4.79□□□□□ -1.64
SMIM28A0A1B0GU29 RNA5SP464-201ENST00000516251 108 ntBASIC4.79□□□□□ -1.64
SMIM28A0A1B0GU29 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
SMIM28A0A1B0GU29 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
SMIM28A0A1B0GU29 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC4.79□□□□□ -1.64
SMIM28A0A1B0GU29 AC023575.1-201ENST00000580510 358 ntBASIC4.79□□□□□ -1.64
SMIM28A0A1B0GU29 RN7SL435P-201ENST00000584418 282 ntBASIC4.79□□□□□ -1.64
SMIM28A0A1B0GU29 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC4.79□□□□□ -1.64
SMIM28A0A1B0GU29 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC4.79□□□□□ -1.64
SMIM28A0A1B0GU29 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC4.79□□□□□ -1.64
SMIM28A0A1B0GU29 AC079587.1-201ENST00000603846 277 ntBASIC4.79□□□□□ -1.64
SMIM28A0A1B0GU29 AC008966.2-201ENST00000606157 453 ntBASIC4.79□□□□□ -1.64
SMIM28A0A1B0GU29 SNORA35B-201ENST00000607417 129 ntBASIC4.79□□□□□ -1.64
SMIM28A0A1B0GU29 AC091979.2-201ENST00000607514 214 ntBASIC4.79□□□□□ -1.64
SMIM28A0A1B0GU29 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC4.79□□□□□ -1.64
SMIM28A0A1B0GU29 AP000843.1-201ENST00000624880 701 ntBASIC4.79□□□□□ -1.64
SMIM28A0A1B0GU29 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.79□□□□□ -1.64
SMIM28A0A1B0GU29 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
SMIM28A0A1B0GU29 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.79□□□□□ -1.64
SMIM28A0A1B0GU29 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
SMIM28A0A1B0GU29 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
SMIM28A0A1B0GU29 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
SMIM28A0A1B0GU29 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SMIM28A0A1B0GU29 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SMIM28A0A1B0GU29 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SMIM28A0A1B0GU29 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
SMIM28A0A1B0GU29 MTCO1P22-201ENST00000604619 1360 ntBASIC4.78□□□□□ -1.64
SMIM28A0A1B0GU29 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC4.78□□□□□ -1.64
SMIM28A0A1B0GU29 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
SMIM28A0A1B0GU29 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC4.78□□□□□ -1.64
SMIM28A0A1B0GU29 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC4.78□□□□□ -1.64
SMIM28A0A1B0GU29 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.78□□□□□ -1.64
SMIM28A0A1B0GU29 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC4.78□□□□□ -1.64
SMIM28A0A1B0GU29 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms