Protein–RNA interactions for Protein: Q9Y5Y9

SCN10A, Sodium channel protein type 10 subunit alpha, humanhuman

Predictions only

Length 1,956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10AQ9Y5Y9 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
SCN10AQ9Y5Y9 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC21.4■■□□□ 1.02
SCN10AQ9Y5Y9 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SCN10AQ9Y5Y9 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SCN10AQ9Y5Y9 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
SCN10AQ9Y5Y9 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
SCN10AQ9Y5Y9 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
SCN10AQ9Y5Y9 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
SCN10AQ9Y5Y9 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SCN10AQ9Y5Y9 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
SCN10AQ9Y5Y9 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC21.4■■□□□ 1.02
SCN10AQ9Y5Y9 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC21.4■■□□□ 1.02
SCN10AQ9Y5Y9 WDR88-203ENST00000592765 651 ntTSL 5 BASIC21.4■■□□□ 1.02
SCN10AQ9Y5Y9 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
SCN10AQ9Y5Y9 AC020907.5-201ENST00000624372 1936 ntBASIC21.4■■□□□ 1.02
SCN10AQ9Y5Y9 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
SCN10AQ9Y5Y9 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SCN10AQ9Y5Y9 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC21.4■■□□□ 1.02
SCN10AQ9Y5Y9 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC21.4■■□□□ 1.02
SCN10AQ9Y5Y9 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC21.4■■□□□ 1.02
SCN10AQ9Y5Y9 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
SCN10AQ9Y5Y9 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
SCN10AQ9Y5Y9 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC21.39■■□□□ 1.02
SCN10AQ9Y5Y9 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC21.39■■□□□ 1.02
SCN10AQ9Y5Y9 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.02
SCN10AQ9Y5Y9 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC21.39■■□□□ 1.02
SCN10AQ9Y5Y9 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC21.39■■□□□ 1.02
SCN10AQ9Y5Y9 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC21.39■■□□□ 1.02
SCN10AQ9Y5Y9 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC21.39■■□□□ 1.02
SCN10AQ9Y5Y9 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC21.39■■□□□ 1.02
SCN10AQ9Y5Y9 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC21.39■■□□□ 1.02
SCN10AQ9Y5Y9 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.01
SCN10AQ9Y5Y9 GOLGA2P11-201ENST00000562660 1621 ntBASIC21.39■■□□□ 1.01
SCN10AQ9Y5Y9 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC21.39■■□□□ 1.01
SCN10AQ9Y5Y9 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
SCN10AQ9Y5Y9 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC21.39■■□□□ 1.01
SCN10AQ9Y5Y9 HOMER2P1-201ENST00000455653 964 ntBASIC21.39■■□□□ 1.01
SCN10AQ9Y5Y9 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
SCN10AQ9Y5Y9 NEK4P2-201ENST00000580004 1012 ntBASIC21.39■■□□□ 1.01
SCN10AQ9Y5Y9 AC069148.1-201ENST00000608741 768 ntBASIC21.39■■□□□ 1.01
SCN10AQ9Y5Y9 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SCN10AQ9Y5Y9 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC21.39■■□□□ 1.01
SCN10AQ9Y5Y9 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
SCN10AQ9Y5Y9 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
SCN10AQ9Y5Y9 KRT8P45-201ENST00000414328 1447 ntBASIC21.38■■□□□ 1.01
SCN10AQ9Y5Y9 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
SCN10AQ9Y5Y9 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC21.38■■□□□ 1.01
SCN10AQ9Y5Y9 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SCN10AQ9Y5Y9 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
SCN10AQ9Y5Y9 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
SCN10AQ9Y5Y9 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC21.38■■□□□ 1.01
SCN10AQ9Y5Y9 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
SCN10AQ9Y5Y9 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
SCN10AQ9Y5Y9 CD81-212ENST00000526072 1172 ntTSL 5 BASIC21.38■■□□□ 1.01
SCN10AQ9Y5Y9 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
SCN10AQ9Y5Y9 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC21.38■■□□□ 1.01
SCN10AQ9Y5Y9 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC21.38■■□□□ 1.01
SCN10AQ9Y5Y9 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
SCN10AQ9Y5Y9 DAP-202ENST00000432074 1048 ntTSL 2 BASIC21.37■■□□□ 1.01
SCN10AQ9Y5Y9 KRT18P56-201ENST00000507275 550 ntBASIC21.37■■□□□ 1.01
SCN10AQ9Y5Y9 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC21.37■■□□□ 1.01
SCN10AQ9Y5Y9 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC21.37■■□□□ 1.01
SCN10AQ9Y5Y9 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
SCN10AQ9Y5Y9 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SCN10AQ9Y5Y9 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
SCN10AQ9Y5Y9 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
SCN10AQ9Y5Y9 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SCN10AQ9Y5Y9 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC21.37■■□□□ 1.01
SCN10AQ9Y5Y9 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SCN10AQ9Y5Y9 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SCN10AQ9Y5Y9 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SCN10AQ9Y5Y9 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
SCN10AQ9Y5Y9 NT5C-210ENST00000582160 860 ntTSL 2 BASIC21.37■■□□□ 1.01
SCN10AQ9Y5Y9 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC21.37■■□□□ 1.01
SCN10AQ9Y5Y9 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SCN10AQ9Y5Y9 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
SCN10AQ9Y5Y9 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
SCN10AQ9Y5Y9 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
SCN10AQ9Y5Y9 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SCN10AQ9Y5Y9 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC21.37■■□□□ 1.01
SCN10AQ9Y5Y9 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC21.37■■□□□ 1.01
SCN10AQ9Y5Y9 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC21.36■■□□□ 1.01
SCN10AQ9Y5Y9 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
SCN10AQ9Y5Y9 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SCN10AQ9Y5Y9 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
SCN10AQ9Y5Y9 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC21.36■■□□□ 1.01
SCN10AQ9Y5Y9 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SCN10AQ9Y5Y9 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SCN10AQ9Y5Y9 AC112907.2-201ENST00000448639 330 ntBASIC21.36■■□□□ 1.01
SCN10AQ9Y5Y9 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC21.36■■□□□ 1.01
SCN10AQ9Y5Y9 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
SCN10AQ9Y5Y9 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
SCN10AQ9Y5Y9 AC009237.14-201ENST00000609975 1594 ntBASIC21.36■■□□□ 1.01
SCN10AQ9Y5Y9 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
SCN10AQ9Y5Y9 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC21.36■■□□□ 1.01
SCN10AQ9Y5Y9 PHB2-202ENST00000440277 996 ntTSL 5 BASIC21.36■■□□□ 1.01
SCN10AQ9Y5Y9 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC21.36■■□□□ 1.01
SCN10AQ9Y5Y9 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC21.36■■□□□ 1.01
SCN10AQ9Y5Y9 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC21.36■■□□□ 1.01
SCN10AQ9Y5Y9 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms