Protein–RNA interactions for Protein: Q9Y5G9

PCDHGA4, Protocadherin gamma-A4, humanhuman

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4Q9Y5G9 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
PCDHGA4Q9Y5G9 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHGA4Q9Y5G9 AC087499.1-201ENST00000418141 1075 ntBASIC19.17■□□□□ 0.66
PCDHGA4Q9Y5G9 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC19.17■□□□□ 0.66
PCDHGA4Q9Y5G9 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHGA4Q9Y5G9 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHGA4Q9Y5G9 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHGA4Q9Y5G9 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC19.17■□□□□ 0.66
PCDHGA4Q9Y5G9 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC19.17■□□□□ 0.66
PCDHGA4Q9Y5G9 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC19.17■□□□□ 0.66
PCDHGA4Q9Y5G9 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHGA4Q9Y5G9 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC19.17■□□□□ 0.66
PCDHGA4Q9Y5G9 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHGA4Q9Y5G9 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHGA4Q9Y5G9 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC19.17■□□□□ 0.66
PCDHGA4Q9Y5G9 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHGA4Q9Y5G9 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
PCDHGA4Q9Y5G9 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHGA4Q9Y5G9 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC19.17■□□□□ 0.66
PCDHGA4Q9Y5G9 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC19.17■□□□□ 0.66
PCDHGA4Q9Y5G9 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHGA4Q9Y5G9 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PCDHGA4Q9Y5G9 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCDHGA4Q9Y5G9 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCDHGA4Q9Y5G9 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCDHGA4Q9Y5G9 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC19.16■□□□□ 0.66
PCDHGA4Q9Y5G9 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
PCDHGA4Q9Y5G9 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
PCDHGA4Q9Y5G9 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCDHGA4Q9Y5G9 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCDHGA4Q9Y5G9 HLA-G-202ENST00000376815 851 ntBASIC19.16■□□□□ 0.66
PCDHGA4Q9Y5G9 HLA-G-203ENST00000376818 1127 ntBASIC19.16■□□□□ 0.66
PCDHGA4Q9Y5G9 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PCDHGA4Q9Y5G9 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PCDHGA4Q9Y5G9 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PCDHGA4Q9Y5G9 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
PCDHGA4Q9Y5G9 AC110285.5-201ENST00000611501 352 ntBASIC19.16■□□□□ 0.66
PCDHGA4Q9Y5G9 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCDHGA4Q9Y5G9 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCDHGA4Q9Y5G9 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCDHGA4Q9Y5G9 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
PCDHGA4Q9Y5G9 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC19.16■□□□□ 0.66
PCDHGA4Q9Y5G9 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC19.16■□□□□ 0.66
PCDHGA4Q9Y5G9 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
PCDHGA4Q9Y5G9 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PCDHGA4Q9Y5G9 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC19.16■□□□□ 0.66
PCDHGA4Q9Y5G9 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC19.16■□□□□ 0.66
PCDHGA4Q9Y5G9 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC19.16■□□□□ 0.66
PCDHGA4Q9Y5G9 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCDHGA4Q9Y5G9 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCDHGA4Q9Y5G9 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCDHGA4Q9Y5G9 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
PCDHGA4Q9Y5G9 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC19.15■□□□□ 0.66
PCDHGA4Q9Y5G9 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCDHGA4Q9Y5G9 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCDHGA4Q9Y5G9 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC19.15■□□□□ 0.66
PCDHGA4Q9Y5G9 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PCDHGA4Q9Y5G9 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
PCDHGA4Q9Y5G9 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCDHGA4Q9Y5G9 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
PCDHGA4Q9Y5G9 KRASP1-201ENST00000407852 552 ntBASIC19.15■□□□□ 0.66
PCDHGA4Q9Y5G9 AL390719.1-204ENST00000412397 1219 ntBASIC19.15■□□□□ 0.66
PCDHGA4Q9Y5G9 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC19.15■□□□□ 0.66
PCDHGA4Q9Y5G9 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
PCDHGA4Q9Y5G9 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC19.15■□□□□ 0.66
PCDHGA4Q9Y5G9 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PCDHGA4Q9Y5G9 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC19.15■□□□□ 0.66
PCDHGA4Q9Y5G9 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCDHGA4Q9Y5G9 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCDHGA4Q9Y5G9 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCDHGA4Q9Y5G9 AC120498.8-201ENST00000614275 531 ntBASIC19.15■□□□□ 0.66
PCDHGA4Q9Y5G9 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
PCDHGA4Q9Y5G9 AC113410.3-201ENST00000623366 203 ntBASIC19.15■□□□□ 0.66
PCDHGA4Q9Y5G9 ADM-207ENST00000530439 1839 ntTSL 2 BASIC19.15■□□□□ 0.66
PCDHGA4Q9Y5G9 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCDHGA4Q9Y5G9 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC19.15■□□□□ 0.66
PCDHGA4Q9Y5G9 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC19.15■□□□□ 0.66
PCDHGA4Q9Y5G9 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.15■□□□□ 0.66
PCDHGA4Q9Y5G9 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCDHGA4Q9Y5G9 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCDHGA4Q9Y5G9 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCDHGA4Q9Y5G9 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCDHGA4Q9Y5G9 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCDHGA4Q9Y5G9 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCDHGA4Q9Y5G9 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCDHGA4Q9Y5G9 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCDHGA4Q9Y5G9 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCDHGA4Q9Y5G9 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC19.15■□□□□ 0.66
PCDHGA4Q9Y5G9 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.66
PCDHGA4Q9Y5G9 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
PCDHGA4Q9Y5G9 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
PCDHGA4Q9Y5G9 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
PCDHGA4Q9Y5G9 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PCDHGA4Q9Y5G9 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC19.14■□□□□ 0.65
PCDHGA4Q9Y5G9 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC19.14■□□□□ 0.65
PCDHGA4Q9Y5G9 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC19.14■□□□□ 0.65
PCDHGA4Q9Y5G9 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC19.14■□□□□ 0.65
PCDHGA4Q9Y5G9 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PCDHGA4Q9Y5G9 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PCDHGA4Q9Y5G9 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms