Protein–RNA interactions for Protein: Q9Y446

PKP3, Plakophilin-3, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3Q9Y446 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
PKP3Q9Y446 F2R-202ENST00000505600 442 ntTSL 2 BASIC19.54■□□□□ 0.72
PKP3Q9Y446 C1QBPP2-201ENST00000528754 825 ntBASIC19.54■□□□□ 0.72
PKP3Q9Y446 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC19.54■□□□□ 0.72
PKP3Q9Y446 AC124016.1-201ENST00000609552 612 ntBASIC19.54■□□□□ 0.72
PKP3Q9Y446 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
PKP3Q9Y446 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC19.54■□□□□ 0.72
PKP3Q9Y446 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.54■□□□□ 0.72
PKP3Q9Y446 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC19.54■□□□□ 0.72
PKP3Q9Y446 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
PKP3Q9Y446 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PKP3Q9Y446 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
PKP3Q9Y446 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PKP3Q9Y446 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
PKP3Q9Y446 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PKP3Q9Y446 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PKP3Q9Y446 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PKP3Q9Y446 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
PKP3Q9Y446 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
PKP3Q9Y446 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PKP3Q9Y446 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PKP3Q9Y446 KRT8P8-201ENST00000434750 1448 ntBASIC19.53■□□□□ 0.72
PKP3Q9Y446 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PKP3Q9Y446 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
PKP3Q9Y446 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PKP3Q9Y446 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
PKP3Q9Y446 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
PKP3Q9Y446 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
PKP3Q9Y446 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
PKP3Q9Y446 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC19.53■□□□□ 0.72
PKP3Q9Y446 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC19.53■□□□□ 0.72
PKP3Q9Y446 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PKP3Q9Y446 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PKP3Q9Y446 AC133681.1-201ENST00000465482 601 ntBASIC19.53■□□□□ 0.72
PKP3Q9Y446 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC19.53■□□□□ 0.72
PKP3Q9Y446 AC110285.5-201ENST00000611501 352 ntBASIC19.53■□□□□ 0.72
PKP3Q9Y446 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC19.53■□□□□ 0.72
PKP3Q9Y446 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PKP3Q9Y446 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PKP3Q9Y446 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
PKP3Q9Y446 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
PKP3Q9Y446 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
PKP3Q9Y446 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC19.53■□□□□ 0.72
PKP3Q9Y446 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19.53■□□□□ 0.72
PKP3Q9Y446 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC19.53■□□□□ 0.72
PKP3Q9Y446 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
PKP3Q9Y446 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC19.52■□□□□ 0.72
PKP3Q9Y446 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC19.52■□□□□ 0.72
PKP3Q9Y446 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PKP3Q9Y446 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC19.52■□□□□ 0.72
PKP3Q9Y446 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PKP3Q9Y446 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PKP3Q9Y446 ABHD17AP1-201ENST00000358206 933 ntBASIC19.52■□□□□ 0.72
PKP3Q9Y446 SERF2-207ENST00000409614 582 ntTSL 2 BASIC19.52■□□□□ 0.72
PKP3Q9Y446 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC19.52■□□□□ 0.72
PKP3Q9Y446 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC19.52■□□□□ 0.72
PKP3Q9Y446 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
PKP3Q9Y446 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC19.52■□□□□ 0.72
PKP3Q9Y446 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC19.52■□□□□ 0.72
PKP3Q9Y446 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PKP3Q9Y446 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PKP3Q9Y446 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.71
PKP3Q9Y446 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
PKP3Q9Y446 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PKP3Q9Y446 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
PKP3Q9Y446 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC19.51■□□□□ 0.71
PKP3Q9Y446 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PKP3Q9Y446 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PKP3Q9Y446 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PKP3Q9Y446 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PKP3Q9Y446 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
PKP3Q9Y446 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PKP3Q9Y446 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
PKP3Q9Y446 NME1-207ENST00000480143 964 ntTSL 2 BASIC19.51■□□□□ 0.71
PKP3Q9Y446 RPPH1-201ENST00000516869 333 ntBASIC19.51■□□□□ 0.71
PKP3Q9Y446 RHOD-202ENST00000532559 538 ntTSL 3 BASIC19.51■□□□□ 0.71
PKP3Q9Y446 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
PKP3Q9Y446 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC19.51■□□□□ 0.71
PKP3Q9Y446 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC19.51■□□□□ 0.71
PKP3Q9Y446 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PKP3Q9Y446 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PKP3Q9Y446 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
PKP3Q9Y446 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PKP3Q9Y446 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PKP3Q9Y446 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC19.51■□□□□ 0.71
PKP3Q9Y446 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PKP3Q9Y446 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC19.51■□□□□ 0.71
PKP3Q9Y446 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PKP3Q9Y446 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PKP3Q9Y446 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PKP3Q9Y446 AC007952.6-201ENST00000573168 2673 ntBASIC19.5■□□□□ 0.71
PKP3Q9Y446 AC003957.1-201ENST00000625108 2673 ntBASIC19.5■□□□□ 0.71
PKP3Q9Y446 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC19.5■□□□□ 0.71
PKP3Q9Y446 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
PKP3Q9Y446 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PKP3Q9Y446 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC19.5■□□□□ 0.71
PKP3Q9Y446 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC19.5■□□□□ 0.71
PKP3Q9Y446 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PKP3Q9Y446 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PKP3Q9Y446 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms