Protein–RNA interactions for Protein: Q9UM47

NOTCH3, Neurogenic locus notch homolog protein 3, humanhuman

Predictions only

Length 2,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3Q9UM47 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NOTCH3Q9UM47 PLK5-205ENST00000642079 1969 ntBASIC15□□□□□ -0.01
NOTCH3Q9UM47 AC092667.1-201ENST00000434301 2586 ntBASIC15□□□□□ -0.01
NOTCH3Q9UM47 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
NOTCH3Q9UM47 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
NOTCH3Q9UM47 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NOTCH3Q9UM47 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC15□□□□□ -0.01
NOTCH3Q9UM47 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC15□□□□□ -0.01
NOTCH3Q9UM47 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC15□□□□□ -0.01
NOTCH3Q9UM47 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC15□□□□□ -0.01
NOTCH3Q9UM47 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC15□□□□□ -0.01
NOTCH3Q9UM47 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC15□□□□□ -0.01
NOTCH3Q9UM47 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC15□□□□□ -0.01
NOTCH3Q9UM47 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC15□□□□□ -0.01
NOTCH3Q9UM47 TUB-203ENST00000534099 1759 ntTSL 2 BASIC15□□□□□ -0.01
NOTCH3Q9UM47 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NOTCH3Q9UM47 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NOTCH3Q9UM47 AL157384.1-201ENST00000445995 2473 ntBASIC15□□□□□ -0.01
NOTCH3Q9UM47 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
NOTCH3Q9UM47 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC15□□□□□ -0.01
NOTCH3Q9UM47 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC15□□□□□ -0.01
NOTCH3Q9UM47 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC14.99□□□□□ -0.01
NOTCH3Q9UM47 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
NOTCH3Q9UM47 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC14.99□□□□□ -0.01
NOTCH3Q9UM47 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
NOTCH3Q9UM47 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
NOTCH3Q9UM47 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC14.99□□□□□ -0.01
NOTCH3Q9UM47 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
NOTCH3Q9UM47 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
NOTCH3Q9UM47 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
NOTCH3Q9UM47 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC14.99□□□□□ -0.01
NOTCH3Q9UM47 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
NOTCH3Q9UM47 STK25-204ENST00000405585 1643 ntTSL 2 BASIC14.99□□□□□ -0.01
NOTCH3Q9UM47 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
NOTCH3Q9UM47 AC079834.2-201ENST00000609776 1949 ntBASIC14.99□□□□□ -0.01
NOTCH3Q9UM47 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC14.99□□□□□ -0.01
NOTCH3Q9UM47 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC14.99□□□□□ -0.01
NOTCH3Q9UM47 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC14.99□□□□□ -0.01
NOTCH3Q9UM47 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC14.99□□□□□ -0.01
NOTCH3Q9UM47 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
NOTCH3Q9UM47 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
NOTCH3Q9UM47 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
NOTCH3Q9UM47 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
NOTCH3Q9UM47 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
NOTCH3Q9UM47 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC14.99□□□□□ -0.01
NOTCH3Q9UM47 AC097488.1-201ENST00000507834 756 ntBASIC14.99□□□□□ -0.01
NOTCH3Q9UM47 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
NOTCH3Q9UM47 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
NOTCH3Q9UM47 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
NOTCH3Q9UM47 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
NOTCH3Q9UM47 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NOTCH3Q9UM47 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC14.98□□□□□ -0.01
NOTCH3Q9UM47 MESTP1-201ENST00000404287 994 ntBASIC14.98□□□□□ -0.01
NOTCH3Q9UM47 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC14.98□□□□□ -0.01
NOTCH3Q9UM47 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC14.98□□□□□ -0.01
NOTCH3Q9UM47 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC14.98□□□□□ -0.01
NOTCH3Q9UM47 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
NOTCH3Q9UM47 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC14.98□□□□□ -0.01
NOTCH3Q9UM47 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC14.98□□□□□ -0.01
NOTCH3Q9UM47 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
NOTCH3Q9UM47 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
NOTCH3Q9UM47 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
NOTCH3Q9UM47 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
NOTCH3Q9UM47 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC14.98□□□□□ -0.01
NOTCH3Q9UM47 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NOTCH3Q9UM47 LGALS8-AS1-201ENST00000487567 1457 ntBASIC14.98□□□□□ -0.01
NOTCH3Q9UM47 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
NOTCH3Q9UM47 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
NOTCH3Q9UM47 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NOTCH3Q9UM47 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NOTCH3Q9UM47 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC14.98□□□□□ -0.01
NOTCH3Q9UM47 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
NOTCH3Q9UM47 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NOTCH3Q9UM47 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC14.98□□□□□ -0.01
NOTCH3Q9UM47 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC14.98□□□□□ -0.01
NOTCH3Q9UM47 ECEL1P2-202ENST00000465689 757 ntBASIC14.98□□□□□ -0.01
NOTCH3Q9UM47 AC087388.1-201ENST00000571370 1112 ntBASIC14.98□□□□□ -0.01
NOTCH3Q9UM47 AP005242.2-201ENST00000580065 1175 ntBASIC14.98□□□□□ -0.01
NOTCH3Q9UM47 FAM87A-204ENST00000613235 858 ntBASIC14.98□□□□□ -0.01
NOTCH3Q9UM47 AL358472.4-201ENST00000633140 710 ntBASIC14.98□□□□□ -0.01
NOTCH3Q9UM47 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC14.98□□□□□ -0.01
NOTCH3Q9UM47 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC14.98□□□□□ -0.01
NOTCH3Q9UM47 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
NOTCH3Q9UM47 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NOTCH3Q9UM47 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
NOTCH3Q9UM47 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
NOTCH3Q9UM47 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
NOTCH3Q9UM47 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
NOTCH3Q9UM47 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NOTCH3Q9UM47 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
NOTCH3Q9UM47 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
NOTCH3Q9UM47 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
NOTCH3Q9UM47 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
NOTCH3Q9UM47 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NOTCH3Q9UM47 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
NOTCH3Q9UM47 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NOTCH3Q9UM47 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NOTCH3Q9UM47 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
NOTCH3Q9UM47 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
NOTCH3Q9UM47 PRR31-201ENST00000371629 978 ntTSL 2 BASIC14.97□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms